Experiment set12S542 for Paraburkholderia bryophila 376MFSha3.1

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Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days

Group: in planta
Media: + Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Culturing: Burk376_ML3a, pot, at 26 (C), (Solid)
By: Marta Torres on 22-Sep-22

Specific Phenotypes

For 1 genes in this experiment

For in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days in Paraburkholderia bryophila 376MFSha3.1

For in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days across organisms

SEED Subsystems

Subsystem #Specific
Terminal cytochrome O ubiquinol oxidase 1
Terminal cytochrome oxidases 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
glycerol-3-phosphate to cytochrome bo oxidase electron transfer 2 2 1
pyruvate to cytochrome bo oxidase electron transfer 2 2 1
NADH to cytochrome bo oxidase electron transfer I 2 2 1
succinate to cytochrome bo oxidase electron transfer 2 2 1
D-lactate to cytochrome bo oxidase electron transfer 2 1 1
proline to cytochrome bo oxidase electron transfer 2 1 1
NADH to cytochrome bo oxidase electron transfer II 2 1 1