Experiment set12S493 for Paraburkholderia bryophila 376MFSha3.1

Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days

Group: in planta
Media: + Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
Culturing: Burk376_ML3a, pot, at 26 (C), (Solid)
By: Marta Torres on 22-Sep-22

Specific Phenotypes

For 4 genes in this experiment

For in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days in Paraburkholderia bryophila 376MFSha3.1

For in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days across organisms

SEED Subsystems

Subsystem	#Specific
Flagellum	2
Bacterial Chemotaxis	1
Flagellar motility	1
Terminal cytochrome O ubiquinol oxidase	1
Terminal cytochrome oxidases	1
Two-component regulatory systems in Campylobacter	1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway	#Steps	#Present	#Specific
glycerol-3-phosphate to cytochrome bo oxidase electron transfer	2	2	1
succinate to cytochrome bo oxidase electron transfer	2	2	1
pyruvate to cytochrome bo oxidase electron transfer	2	2	1
NADH to cytochrome bo oxidase electron transfer I	2	2	1
proline to cytochrome bo oxidase electron transfer	2	1	1
NADH to cytochrome bo oxidase electron transfer II	2	1	1
D-lactate to cytochrome bo oxidase electron transfer	2	1	1