Experiment set12S384 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS03435 -6.0 -1.9 ketol-acid reductoisomerase compare
MMP_RS03315 -5.3 -1.1 ferrous iron transport protein A compare
MMP_RS07005 -5.2 -0.6 4Fe-4S binding protein compare
MMP_RS07390 -5.1 -2.7 cell division protein FtsZ compare
MMP_RS06730 -4.7 -1.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS05550 -4.4 -0.7 cation:proton antiporter compare
MMP_RS03475 -4.1 -0.7 hypothetical protein compare
MMP_RS01175 -4.0 -4.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03640 -4.0 -3.9 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08300 -3.8 -1.3 metal-sulfur cluster assembly factor compare
MMP_RS06350 -3.7 -6.0 HesA/MoeB/ThiF family protein compare
MMP_RS07755 -3.6 -1.2 DUF555 domain-containing protein compare
MMP_RS06355 -3.5 -2.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS00520 -3.5 -1.5 RNA polymerase Rpb4 family protein compare
MMP_RS00515 -3.4 -1.0 DUF655 domain-containing protein compare
MMP_RS06625 -3.4 -1.8 DNA primase compare
MMP_RS08820 -3.3 -5.0 hypothetical protein compare
MMP_RS03960 -3.2 -1.3 hypothetical protein compare
MMP_RS08715 -3.2 -1.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03445 -3.2 -1.0 methanogenesis marker 17 protein compare
MMP_RS08435 -3.1 -2.3 Era-like GTP-binding protein compare
MMP_RS04780 -3.1 -3.3 ribonuclease P compare
MMP_RS01020 -3.1 -1.1 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01265 -3.0 -3.3 hypothetical protein compare
MMP_RS06295 -3.0 -7.1 methanogenesis marker 14 protein compare
MMP_RS00810 -2.9 -5.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07635 -2.8 -4.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08635 -2.8 -1.7 UbiA family prenyltransferase compare
MMP_RS01225 -2.8 -4.2 DUF5379 domain-containing protein compare
MMP_RS02240 -2.7 -2.7 methanogenesis marker 7 protein compare
MMP_RS07555 -2.7 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS08210 -2.7 -2.4 phosphatidylglycerophosphatase A compare
MMP_RS02800 -2.6 -6.9 nucleotidyltransferase domain-containing protein compare
MMP_RS04900 -2.6 -17.7 hypothetical protein compare
MMP_RS00730 -2.6 -5.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS03580 -2.6 -2.0 signal recognition particle-docking protein FtsY compare
MMP_RS03600 -2.5 -2.2 triose-phosphate isomerase compare
MMP_RS06725 -2.5 -8.7 hypothetical protein compare
MMP_RS02195 -2.5 -3.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03025 -2.4 -4.1 molybdenum cofactor guanylyltransferase compare
MMP_RS06285 -2.4 -2.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00240 -2.4 -13.5 type II secretion system F family protein compare
MMP_RS06020 -2.4 -3.9 archaeoflavoprotein AfpA compare
MMP_RS00250 -2.4 -14.2 Flp pilus assembly complex ATPase component TadA compare
MMP_RS08745 -2.4 -5.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS05635 -2.4 -7.8 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS04710 -2.4 -1.9 hypothetical protein compare
MMP_RS08860 -2.4 -6.2 MinD/ParA family protein compare
MMP_RS01290 -2.4 -12.0 class III signal peptide-containing protein compare
MMP_RS03700 -2.4 -7.8 sodium:proton antiporter compare
MMP_RS08855 -2.4 -9.2 hypothetical protein compare
MMP_RS07750 -2.3 -4.4 DUF357 domain-containing protein compare
MMP_RS08785 -2.3 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS05515 -2.3 -7.4 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS09020 -2.3 -1.5 hypothetical protein compare
MMP_RS07075 -2.3 -2.8 phosphomannomutase/phosphoglucomutase compare
MMP_RS00695 -2.3 -0.9 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01925 -2.3 -7.3 DUF1616 domain-containing protein compare
MMP_RS00895 -2.2 -2.7 hypothetical protein compare
MMP_RS08675 -2.2 -2.8 class III signal peptide-containing protein compare
MMP_RS06940 -2.2 -2.8 polyprenyl diphosphate synthase compare
MMP_RS01830 -2.2 -1.3 tRNA-Val compare
MMP_RS01890 -2.2 -3.4 nucleotide sugar dehydrogenase compare
MMP_RS03110 -2.2 -5.9 glycosyltransferase family 2 protein compare
MMP_RS01280 -2.2 -13.8 DUF515 domain-containing protein compare
MMP_RS01310 -2.2 -13.6 hypothetical protein compare
MMP_RS02355 -2.1 -2.5 30S ribosomal protein S27ae compare
MMP_RS01270 -2.1 -12.8 prepilin peptidase compare
MMP_RS07330 -2.1 -14.5 membrane protein compare
MMP_RS06925 -2.1 -2.4 ribonuclease VapC4 compare
MMP_RS01285 -2.1 -11.2 hypothetical protein compare
MMP_RS07605 -2.1 -3.2 diadenylate cyclase compare
MMP_RS03015 -2.1 -7.8 GTP 3' 8-cyclase MoaA compare
MMP_RS04720 -2.1 -2.3 DedA family protein compare
MMP_RS02145 -2.1 -6.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS06120 -2.1 -1.4 UPF0147 family protein compare
MMP_RS06895 -2.1 -1.5 selenocysteine-specific translation elongation factor compare
MMP_RS06035 -2.1 -9.4 glycosyltransferase family 2 protein compare
MMP_RS00245 -2.1 -15.3 type II secretion system F family protein compare
MMP_RS03080 -2.1 -3.2 universal stress protein compare
MMP_RS01875 -2.1 -6.5 N-acetyltransferase compare
MMP_RS00985 -2.1 -5.0 CDC48 family AAA ATPase compare
MMP_RS01295 -2.0 -9.9 hypothetical protein compare
MMP_RS07695 -2.0 -5.1 DUF3236 domain-containing protein compare
MMP_RS01305 -2.0 -15.2 hypothetical protein compare
MMP_RS05930 -2.0 -1.6 3-isopropylmalate dehydratase large subunit compare
MMP_RS06670 -2.0 -4.6 glucose-6-phosphate isomerase compare
MMP_RS07525 -2.0 -6.2 4Fe-4S binding protein compare
MMP_RS00305 -2.0 -1.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS03400 -2.0 -2.5 archease compare
MMP_RS05425 -2.0 -4.5 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS08790 -2.0 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS00040 -2.0 -4.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00320 -2.0 -1.5 class I SAM-dependent methyltransferase compare
MMP_RS01885 -2.0 -4.4 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06340 -1.9 -5.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS08195 -1.9 -7.3 hypothetical protein compare
MMP_RS01610 -1.9 -1.8 hypothetical protein compare
MMP_RS05245 -1.9 -7.0 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS00315 -1.9 -4.7 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS05580 -1.9 -11.7 glycosyltransferase compare
MMP_RS01275 -1.9 -5.6 class III signal peptide-containing protein compare
MMP_RS07630 -1.9 -1.5 ATP-binding cassette domain-containing protein compare
MMP_RS07200 -1.9 -4.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS03390 -1.9 -6.4 malate dehydrogenase compare
MMP_RS09055 -1.8 -0.9 CAP domain-containing protein compare
MMP_RS02235 -1.8 -6.5 CBS domain-containing protein compare
MMP_RS01380 -1.8 -3.6 PHP domain-containing protein compare
MMP_RS01905 -1.8 -9.6 glycosyltransferase compare
MMP_RS01960 -1.8 -1.1 hypothetical protein compare
MMP_RS03385 -1.8 -1.0 cation diffusion facilitator family transporter compare
MMP_RS03095 -1.8 -5.1 diphthine synthase compare
MMP_RS03125 -1.8 -6.5 cell division ATPase MinD compare
MMP_RS01880 -1.8 -3.8 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS00115 -1.8 -8.0 radical SAM protein compare
MMP_RS04850 -1.8 -10.1 UPF0254 family protein compare
MMP_RS08645 -1.8 -4.6 UPF0179 family protein compare
MMP_RS08720 -1.8 -1.3 4Fe-4S binding protein compare
MMP_RS05345 -1.7 -4.1 hypothetical protein compare
MMP_RS04585 -1.7 -7.8 AIR synthase related protein compare
MMP_RS05815 -1.7 -1.6 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01315 -1.7 -13.2 DUF2341 domain-containing protein compare
MMP_RS01365 -1.7 -1.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01900 -1.7 -8.0 hypothetical protein compare
MMP_RS01085 -1.7 -1.6 hypothetical protein compare
MMP_RS06485 -1.7 -0.8 zinc ribbon domain-containing protein compare
MMP_RS05845 -1.7 -1.2 tRNA-intron lyase compare
MMP_RS07380 -1.7 -1.6 transcription elongation factor Spt5 compare
MMP_RS07710 -1.7 -4.8 cell division protein FtsZ compare
MMP_RS07420 -1.6 -3.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06980 -1.6 -5.0 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS09045 -1.6 -11.6 class III signal peptide-containing protein compare
MMP_RS00915 -1.6 -4.5 DUF116 domain-containing protein compare
MMP_RS06885 -1.6 -2.0 50S ribosome-binding GTPase compare
MMP_RS01665 -1.6 -3.7 DUF2111 domain-containing protein compare
MMP_RS04615 -1.6 -3.0 PDGLE domain-containing protein compare
MMP_RS01075 -1.6 -1.6 hypothetical protein compare
MMP_RS07700 -1.6 -5.3 DUF1188 domain-containing protein compare
MMP_RS01700 -1.6 -0.8 dihydroxy-acid dehydratase compare
MMP_RS06900 -1.6 -1.9 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06315 -1.6 -0.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00110 -1.6 -2.2 hypothetical protein compare
MMP_RS01500 -1.5 -1.6 CBS domain-containing protein compare
MMP_RS02010 -1.5 -3.9 PHP domain-containing protein compare
MMP_RS01915 -1.5 -7.5 DUF354 domain-containing protein compare
MMP_RS04685 -1.5 -2.1 DUF126 domain-containing protein compare
MMP_RS06105 -1.5 -4.2 hydrogenase maturation peptidase HycI compare
MMP_RS02875 -1.5 -6.1 chorismate pyruvate-lyase family protein compare
MMP_RS03035 -1.5 -2.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02345 -1.5 -2.9 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS07860 -1.5 -0.5 hypothetical protein compare
MMP_RS07600 -1.4 -1.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS03020 -1.4 -4.4 peptidylprolyl isomerase compare
MMP_RS06110 -1.4 -2.9 ATP-dependent protease LonB compare
MMP_RS01220 -1.4 -4.2 hypothetical protein compare
MMP_RS05250 -1.4 -2.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01100 -1.4 -0.9 ABC transporter ATP-binding protein compare
MMP_RS07845 -1.4 -2.4 LL-diaminopimelate aminotransferase compare
MMP_RS06865 -1.4 -1.6 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS00750 -1.4 -1.6 fumarate hydratase compare
MMP_RS04775 -1.4 -2.3 adenosylhomocysteinase compare
MMP_RS01755 -1.4 -0.8 DUF2097 domain-containing protein compare
MMP_RS08330 -1.4 -3.9 NADH-quinone oxidoreductase subunit H compare
MMP_RS06395 -1.3 -2.3 ThiF family adenylyltransferase compare
MMP_RS05540 -1.3 -1.6 hypothetical protein compare
MMP_RS03205 -1.3 -1.0 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS08155 -1.3 -5.0 hypothetical protein compare
MMP_RS00060 -1.3 -1.4 3-dehydroquinate synthase II compare
MMP_RS07445 -1.3 -3.9 helix-turn-helix domain-containing protein compare
MMP_RS01195 -1.3 -0.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS05460 -1.3 -6.1 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS05920 -1.3 -0.4 50S ribosomal protein L37e compare
MMP_RS05430 -1.3 -5.7 TIGR00288 family NYN domain-containing protein compare
MMP_RS07875 -1.3 -2.7 hypothetical protein compare
MMP_RS00735 -1.3 -3.0 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00300 -1.3 -0.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06400 -1.3 -0.7 4Fe-4S binding protein compare
MMP_RS01910 -1.3 -5.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS07730 -1.3 -1.1 pyruvate synthase subunit beta compare
MMP_RS08995 -1.3 -0.9 hypothetical protein compare
MMP_RS01895 -1.3 -6.5 flippase compare
MMP_RS01005 -1.2 -0.8 riboflavin synthase compare
MMP_RS08440 -1.2 -1.7 cell division protein SepF compare
MMP_RS08940 -1.2 -0.9 MetS family NSS transporter small subunit compare
MMP_RS07540 -1.2 -2.6 CBS domain-containing protein compare
MMP_RS07350 -1.2 -1.2 preprotein translocase subunit Sec61beta compare
MMP_RS02135 -1.2 -3.0 DUF5612 domain-containing protein compare
MMP_RS02930 -1.2 -1.4 class I SAM-dependent methyltransferase compare
MMP_RS06855 -1.2 -5.8 hypothetical protein compare
MMP_RS01325 -1.2 -0.9 dihydroneopterin aldolase family protein compare
MMP_RS01800 -1.2 -2.2 TIGR00303 family protein compare
MMP_RS06630 -1.2 -0.7 UPF0058 family protein compare
MMP_RS01720 -1.2 -1.1 replication factor C large subunit compare
MMP_RS05555 -1.2 -0.7 DUF4040 domain-containing protein compare
MMP_RS04485 -1.2 -5.8 putative beta-lysine N-acetyltransferase compare
MMP_RS06975 -1.2 -1.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07625 -1.2 -1.9 cobalt ECF transporter T component CbiQ compare
MMP_RS00140 -1.2 -3.9 DUF192 domain-containing protein compare
MMP_RS03250 -1.2 -2.9 MJ1244 family protein compare
MMP_RS08600 -1.2 -1.9 flagellar protein D compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments