Experiment set12S384 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete no stress control

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS02595 +3.1 4.9 putative zinc-binding protein compare
MMP_RS01775 +2.2 3.0 TIGR00297 family protein compare
MMP_RS03305 +2.2 10.5 winged helix-turn-helix domain-containing protein compare
MMP_RS07885 +1.6 2.5 tripartite tricarboxylate transporter permease compare
MMP_RS04875 +1.6 3.7 energy-converting hydrogenase B subunit P compare
MMP_RS07435 +1.6 2.6 GMP synthase subunit A compare
MMP_RS09025 +1.6 1.9 hypothetical protein compare
MMP_RS00825 +1.3 2.4 fumarylacetoacetate hydrolase family protein compare
MMP_RS08775 +1.3 2.4 methanogenesis marker 9 domain-containing protein compare
MMP_RS05975 +1.2 5.6 hypothetical protein compare
MMP_RS03065 +1.1 5.3 AzlC family ABC transporter permease compare
MMP_RS06680 +1.1 5.2 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS01055 +1.0 1.2 hypothetical protein compare
MMP_RS01570 +1.0 1.4 hypothetical protein compare
MMP_RS04015 +1.0 1.8 hypothetical protein compare
MMP_RS06555 +1.0 2.4 cupin domain-containing protein compare
MMP_RS07095 +0.9 4.2 PspC domain-containing protein compare
MMP_RS04145 +0.9 1.5 hypothetical protein compare
MMP_RS06570 +0.9 1.9 DUF190 domain-containing protein compare
MMP_RS06685 +0.9 2.8 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08265 +0.9 1.9 rubrerythrin compare
MMP_RS00700 +0.9 1.7 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS07890 +0.9 1.5 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS02605 +0.9 0.7 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS00655 +0.9 2.0 hypothetical protein compare
MMP_RS03840 +0.8 2.5 hypothetical protein compare
MMP_RS05675 +0.8 1.9 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS07195 +0.8 4.0 M20 family metallo-hydrolase compare
MMP_RS01420 +0.8 1.3 hypothetical protein compare
MMP_RS06490 +0.8 1.5 hypothetical protein compare
MMP_RS03875 +0.8 1.3 hypothetical protein compare
MMP_RS02815 +0.7 1.2 hypothetical protein compare
MMP_RS00400 +0.7 3.3 tributyrin esterase compare
MMP_RS07925 +0.7 2.9 haloacid dehalogenase compare
MMP_RS02790 +0.7 0.8 class III signal peptide-containing protein compare
MMP_RS02385 +0.7 1.8 ATP-binding protein compare
MMP_RS07645 +0.7 2.1 aldehyde dehydrogenase family protein compare
MMP_RS04735 +0.7 2.7 tautomerase family protein compare
MMP_RS08455 +0.7 1.6 multiprotein bridging factor aMBF1 compare
MMP_RS01855 +0.7 3.3 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS06575 +0.7 1.2 fluoride efflux transporter CrcB compare
MMP_RS00345 +0.7 2.0 DUF2666 domain-containing protein compare
MMP_RS09050 +0.7 1.4 CAP domain-containing protein compare
MMP_RS01130 +0.7 2.5 flavoprotein compare
MMP_RS06520 +0.7 2.9 DUF1786 domain-containing protein compare
MMP_RS01630 +0.7 2.0 N-glycosylase/DNA lyase compare
MMP_RS00705 +0.7 1.4 hypothetical protein compare
MMP_RS05970 +0.7 1.7 class II SORL domain-containing protein compare
MMP_RS01965 +0.6 1.7 DUF1616 domain-containing protein compare
MMP_RS05985 +0.6 0.8 hypothetical protein compare
MMP_RS02375 +0.6 3.5 hypothetical protein compare
MMP_RS08310 +0.6 1.1 TMEM165/GDT1 family protein compare
MMP_RS05980 +0.6 2.6 ferritin compare
MMP_RS08380 +0.6 1.4 phosphatase PAP2 family protein compare
MMP_RS07415 +0.6 1.6 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS04055 +0.6 0.9 hypothetical protein compare
MMP_RS03280 +0.6 1.7 pyridoxamine 5'-phosphate oxidase family protein compare
MMP_RS00830 +0.6 1.3 purine phosphoribosyltransferase family protein compare
MMP_RS00155 +0.6 2.4 heavy metal-binding domain-containing protein compare
MMP_RS00990 +0.6 1.7 hypothetical protein compare
MMP_RS03220 +0.6 0.8 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS00375 +0.6 2.0 ammonium transporter compare
MMP_RS01180 +0.6 0.7 XTP/dITP diphosphatase compare
MMP_RS00950 +0.6 2.0 site-2 protease family protein compare
MMP_RS05150 +0.6 2.1 hypothetical protein compare
MMP_RS08275 +0.6 2.1 hypothetical protein compare
MMP_RS03965 +0.6 1.1 hypothetical protein compare
MMP_RS08315 +0.6 0.9 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS01620 +0.5 2.3 hypothetical protein compare
MMP_RS01515 +0.5 2.6 PINc/VapC family ATPase compare
MMP_RS08130 +0.5 2.3 IGHMBP2 family helicase compare
MMP_RS00435 +0.5 2.9 CPBP family intramembrane metalloprotease compare
MMP_RS06910 +0.5 2.8 RlmF-related methyltransferase compare
MMP_RS08725 +0.5 0.5 Ni/Fe hydrogenase subunit alpha compare
MMP_RS00660 +0.5 2.5 alkaline phosphatase family protein compare
MMP_RS06275 +0.5 2.1 ATP-dependent DNA helicase compare
MMP_RS03895 +0.5 0.8 hypothetical protein compare
MMP_RS01645 +0.5 1.2 SWIM zinc finger family protein compare
MMP_RS08485 +0.5 2.3 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS08075 +0.5 2.1 DUF749 domain-containing protein compare
MMP_RS04610 +0.5 0.8 Dabb family protein compare
MMP_RS03585 +0.5 1.2 Hsp20/alpha crystallin family protein compare
MMP_RS02390 +0.5 2.3 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS01065 +0.5 2.2 alpha/beta hydrolase compare
MMP_RS00085 +0.5 1.8 DNA cytosine methyltransferase compare
MMP_RS02590 +0.5 2.8 low molecular weight phosphatase family protein compare
MMP_RS05365 +0.5 0.7 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS08670 +0.5 2.0 metallophosphoesterase compare
MMP_RS08100 +0.5 2.1 8-amino-7-oxononanoate synthase compare
MMP_RS00670 +0.5 1.3 TIM barrel protein compare
MMP_RS02250 +0.5 2.6 FRG domain-containing protein compare
MMP_RS09065 +0.5 2.9 hypothetical protein compare
MMP_RS01320 +0.5 1.0 hypothetical protein compare
MMP_RS00940 +0.5 1.5 daunorubicin resistance protein DrrA family ABC transporter ATP-binding protein compare
MMP_RS07800 +0.5 1.5 ATP-binding cassette domain-containing protein compare
MMP_RS00945 +0.5 0.5 PadR family transcriptional regulator compare
MMP_RS06585 +0.5 0.7 DMT family protein compare
MMP_RS02915 +0.5 1.5 amino acid ABC transporter permease compare
MMP_RS06325 +0.5 0.5 hypothetical protein compare
MMP_RS07680 +0.5 1.6 DUF366 family protein compare
MMP_RS06705 +0.5 1.3 formate/nitrite transporter family protein compare
MMP_RS00905 +0.5 0.7 phenylacetate--CoA ligase compare
MMP_RS08640 +0.5 2.5 TIM barrel protein compare
MMP_RS07735 +0.4 0.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS07840 +0.4 1.0 ribonuclease III compare
MMP_RS05085 +0.4 1.9 AAA family ATPase compare
MMP_RS04190 +0.4 1.6 hypothetical protein compare
MMP_RS02455 +0.4 1.5 hypothetical protein compare
MMP_RS06010 +0.4 2.2 heavy metal translocating P-type ATPase compare
MMP_RS06065 +0.4 2.9 iron ABC transporter substrate-binding protein compare
MMP_RS07150 +0.4 1.9 MTH895/ArsE family thioredoxin-like protein compare
MMP_RS02415 +0.4 0.8 site-specific integrase compare
MMP_RS08410 +0.4 1.7 DUF169 domain-containing protein compare
MMP_RS01675 +0.4 0.6 hypothetical protein compare
MMP_RS00560 +0.4 1.9 cation:proton antiporter compare
MMP_RS00280 +0.4 2.2 DUF2118 domain-containing protein compare
MMP_RS05990 +0.4 1.3 DsrE family protein compare
MMP_RS05360 +0.4 1.2 hypothetical protein compare
MMP_RS05960 +0.4 2.1 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS01200 +0.4 1.7 hypothetical protein compare
MMP_RS08470 +0.4 2.3 ATP-binding cassette domain-containing protein compare
MMP_RS02315 +0.4 1.0 RimK family alpha-L-glutamate ligase compare
MMP_RS00290 +0.4 1.6 hypothetical protein compare
MMP_RS04105 +0.4 1.9 MarR family transcriptional regulator compare
MMP_RS07120 +0.4 2.0 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS02510 +0.4 1.2 site-specific integrase compare
MMP_RS04800 +0.4 1.6 chemotaxis protein CheW compare
MMP_RS00625 +0.4 1.6 hypothetical protein compare
MMP_RS02225 +0.4 1.5 carbohydrate kinase family protein compare
MMP_RS02325 +0.4 1.3 epoxyqueuosine reductase compare
MMP_RS01850 +0.4 1.3 phosphate ABC transporter substrate-binding protein compare
MMP_RS00855 +0.4 1.0 DUF367 family protein compare
MMP_RS01990 +0.4 1.2 hypothetical protein compare
MMP_RS06185 +0.4 1.1 thermonuclease family protein compare
MMP_RS02465 +0.4 1.4 hypothetical protein compare
MMP_RS08480 +0.4 2.2 molybdate ABC transporter substrate-binding protein compare
MMP_RS07985 +0.4 2.1 nitroreductase family protein compare
MMP_RS01210 +0.4 1.3 sodium:solute symporter compare
MMP_RS00960 +0.4 1.3 iron export ABC transporter permease subunit FetB compare
MMP_RS00235 +0.4 1.1 HDIG domain-containing protein compare
MMP_RS06965 +0.4 1.6 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS04945 +0.4 1.0 hypothetical protein compare
MMP_RS01475 +0.4 1.2 phosphosulfolactate synthase compare
MMP_RS01805 +0.4 1.1 NUDIX hydrolase compare
MMP_RS00395 +0.4 0.5 MGMT family protein compare
MMP_RS05780 +0.4 1.4 multidrug resistance efflux transporter family protein compare
MMP_RS01110 +0.4 0.8 FmdE family protein compare
MMP_RS07795 +0.4 1.5 site-2 protease family protein compare
MMP_RS02215 +0.3 1.8 ECF transporter S component compare
MMP_RS02740 +0.3 0.7 hypothetical protein compare
MMP_RS06305 +0.3 1.3 transporter substrate-binding domain-containing protein compare
MMP_RS03655 +0.3 1.4 DUF1894 domain-containing protein compare
MMP_RS01640 +0.3 1.2 2-oxoacid:acceptor oxidoreductase subunit alpha compare
MMP_RS06875 +0.3 1.1 FAD-dependent oxidoreductase compare
MMP_RS07100 +0.3 1.8 hypothetical protein compare
MMP_RS08085 +0.3 1.6 hypothetical protein compare
MMP_RS03130 +0.3 1.6 hypothetical protein compare
MMP_RS02295 +0.3 1.3 TatD family hydrolase compare
MMP_RS07765 +0.3 1.5 sodium:alanine symporter family protein compare
MMP_RS06860 +0.3 0.5 4Fe-4S binding protein compare
MMP_RS06430 +0.3 1.0 6-carboxytetrahydropterin synthase QueD compare
MMP_RS00795 +0.3 1.5 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08575 +0.3 2.0 hypothetical protein compare
MMP_RS02110 +0.3 0.6 hypothetical protein compare
MMP_RS01525 +0.3 0.5 nucleoside-diphosphate kinase compare
MMP_RS08630 +0.3 1.7 archaellar assembly protein FlaJ compare
MMP_RS08580 +0.3 0.6 flagellin compare
MMP_RS01060 +0.3 1.7 calcium/sodium antiporter compare
MMP_RS07715 +0.3 1.5 YfcE family phosphodiesterase compare
MMP_RS01765 +0.3 0.8 HIT family protein compare
MMP_RS00980 +0.3 1.3 hypothetical protein compare
MMP_RS08080 +0.3 1.1 YchF/TatD family DNA exonuclease compare
MMP_RS05895 +0.3 1.4 metallophosphoesterase compare
MMP_RS02895 +0.3 1.4 DHH family phosphoesterase compare
MMP_RS05545 +0.3 0.6 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS06375 +0.3 0.8 ATP-dependent sacrificial sulfur transferase LarE compare
MMP_RS04845 +0.3 1.2 CheF family chemotaxis protein compare
MMP_RS07675 +0.3 2.2 S-layer protein compare
MMP_RS06005 +0.3 0.8 heavy-metal-associated domain-containing protein compare
MMP_RS04745 +0.3 1.3 proteasome assembly chaperone family protein compare
MMP_RS06335 +0.3 1.2 HAD family hydrolase compare
MMP_RS05140 +0.3 0.7 helix-turn-helix transcriptional regulator compare
MMP_RS07590 +0.3 1.5 hypothetical protein compare
MMP_RS02380 +0.3 0.8 ATP-binding protein compare
MMP_RS03490 +0.3 0.4 DUF2115 domain-containing protein compare
MMP_RS06115 +0.3 1.1 class II aldolase/adducin family protein compare
MMP_RS00650 +0.3 1.0 ABC transporter ATP-binding protein compare
MMP_RS04035 +0.3 0.7 hypothetical protein compare
MMP_RS04305 +0.3 0.4 hypothetical protein compare
MMP_RS06500 +0.3 1.4 ATP-binding protein compare
MMP_RS08325 +0.3 1.3 hypothetical protein compare
MMP_RS03730 +0.3 1.6 ABC transporter substrate-binding protein compare
MMP_RS03235 +0.3 0.9 tRNA pseudouridine(13) synthase TruD compare
MMP_RS03555 +0.3 0.7 transcriptional regulator compare
MMP_RS01785 +0.3 1.1 hypothetical protein compare
MMP_RS04115 +0.3 1.8 cytosine permease compare
MMP_RS01160 +0.3 0.9 DMT family transporter compare
MMP_RS08990 +0.3 1.3 hypothetical protein compare
MMP_RS05600 +0.3 1.9 AglZ/HisF2 family acetamidino modification protein compare
MMP_RS08705 +0.3 0.6 sulfopyruvate decarboxylase subunit beta compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments