Experiment set12S375 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS06625 -7.5 -1.6 DNA primase compare
MMP_RS00305 -6.4 -1.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS08720 -6.3 -1.3 4Fe-4S binding protein compare
MMP_RS03315 -5.3 -1.0 ferrous iron transport protein A compare
MMP_RS05920 -5.2 -0.6 50S ribosomal protein L37e compare
MMP_RS01385 -5.2 -0.6 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS04720 -5.1 -2.9 DedA family protein compare
MMP_RS00515 -5.1 -0.8 DUF655 domain-containing protein compare
MMP_RS00695 -5.0 -0.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05550 -4.5 -0.7 cation:proton antiporter compare
MMP_RS07735 -4.2 -0.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01020 -4.0 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02900 -3.9 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS00300 -3.8 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08650 -3.7 -3.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06285 -3.7 -2.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS02240 -3.6 -2.6 methanogenesis marker 7 protein compare
MMP_RS01830 -3.5 -1.5 tRNA-Val compare
MMP_RS06400 -3.5 -1.4 4Fe-4S binding protein compare
MMP_RS06120 -3.5 -1.9 UPF0147 family protein compare
MMP_RS07730 -3.5 -2.2 pyruvate synthase subunit beta compare
MMP_RS00110 -3.5 -2.7 hypothetical protein compare
MMP_RS06350 -3.4 -6.1 HesA/MoeB/ThiF family protein compare
MMP_RS07600 -3.4 -1.9 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07845 -3.2 -2.5 LL-diaminopimelate aminotransferase compare
MMP_RS07005 -3.2 -0.6 4Fe-4S binding protein compare
MMP_RS06670 -3.2 -5.6 glucose-6-phosphate isomerase compare
MMP_RS02145 -3.2 -7.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS01325 -3.0 -1.8 dihydroneopterin aldolase family protein compare
MMP_RS01175 -3.0 -3.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS01545 -2.9 -1.1 CBS domain-containing protein compare
MMP_RS01960 -2.9 -1.1 hypothetical protein compare
MMP_RS01900 -2.9 -12.2 hypothetical protein compare
MMP_RS00040 -2.9 -6.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS08440 -2.9 -2.4 cell division protein SepF compare
MMP_RS08675 -2.8 -3.2 class III signal peptide-containing protein compare
MMP_RS08210 -2.8 -2.2 phosphatidylglycerophosphatase A compare
MMP_RS01265 -2.8 -2.3 hypothetical protein compare
MMP_RS01500 -2.8 -2.2 CBS domain-containing protein compare
MMP_RS01905 -2.8 -13.4 glycosyltransferase compare
MMP_RS04900 -2.8 -19.6 hypothetical protein compare
MMP_RS05250 -2.7 -2.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS08745 -2.7 -5.3 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS09020 -2.7 -1.3 hypothetical protein compare
MMP_RS01925 -2.6 -6.4 DUF1616 domain-containing protein compare
MMP_RS08860 -2.6 -5.5 MinD/ParA family protein compare
MMP_RS01880 -2.6 -5.9 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08820 -2.6 -4.9 hypothetical protein compare
MMP_RS06295 -2.6 -6.6 methanogenesis marker 14 protein compare
MMP_RS03035 -2.6 -2.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01890 -2.5 -3.7 nucleotide sugar dehydrogenase compare
MMP_RS03600 -2.5 -1.8 triose-phosphate isomerase compare
MMP_RS07635 -2.5 -5.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02345 -2.5 -3.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01610 -2.5 -2.9 hypothetical protein compare
MMP_RS03640 -2.5 -2.8 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01755 -2.5 -1.2 DUF2097 domain-containing protein compare
MMP_RS06130 -2.5 -3.2 peptidylprolyl isomerase compare
MMP_RS06230 -2.5 -2.4 helix-turn-helix domain-containing protein compare
MMP_RS08790 -2.4 -1.6 translation initiation factor IF-2 subunit alpha compare
MMP_RS05635 -2.4 -8.4 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS00685 -2.4 -3.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS03445 -2.4 -0.9 methanogenesis marker 17 protein compare
MMP_RS04710 -2.3 -1.6 hypothetical protein compare
MMP_RS05815 -2.3 -1.8 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS03025 -2.3 -5.0 molybdenum cofactor guanylyltransferase compare
MMP_RS06725 -2.3 -7.3 hypothetical protein compare
MMP_RS05640 -2.3 -5.4 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01875 -2.3 -6.7 N-acetyltransferase compare
MMP_RS03580 -2.3 -3.1 signal recognition particle-docking protein FtsY compare
MMP_RS08635 -2.2 -1.6 UbiA family prenyltransferase compare
MMP_RS06315 -2.2 -0.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00985 -2.2 -3.8 CDC48 family AAA ATPase compare
MMP_RS08715 -2.2 -1.3 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06020 -2.2 -3.4 archaeoflavoprotein AfpA compare
MMP_RS03475 -2.2 -0.6 hypothetical protein compare
MMP_RS00750 -2.2 -2.1 fumarate hydratase compare
MMP_RS00240 -2.2 -12.3 type II secretion system F family protein compare
MMP_RS06730 -2.2 -1.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS03700 -2.2 -6.9 sodium:proton antiporter compare
MMP_RS06885 -2.1 -2.6 50S ribosome-binding GTPase compare
MMP_RS02195 -2.1 -3.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS07330 -2.1 -14.2 membrane protein compare
MMP_RS06310 -2.1 -3.1 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS04090 -2.1 -2.3 hypothetical protein compare
MMP_RS07750 -2.1 -3.6 DUF357 domain-containing protein compare
MMP_RS01195 -2.0 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS02235 -2.0 -8.3 CBS domain-containing protein compare
MMP_RS00115 -2.0 -10.3 radical SAM protein compare
MMP_RS03400 -2.0 -2.2 archease compare
MMP_RS07710 -2.0 -5.2 cell division protein FtsZ compare
MMP_RS07200 -2.0 -4.8 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00810 -2.0 -5.6 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS01295 -2.0 -10.1 hypothetical protein compare
MMP_RS06340 -2.0 -5.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04780 -2.0 -2.6 ribonuclease P compare
MMP_RS01005 -2.0 -0.6 riboflavin synthase compare
MMP_RS06980 -2.0 -6.5 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01270 -2.0 -10.9 prepilin peptidase compare
MMP_RS01380 -1.9 -4.4 PHP domain-containing protein compare
MMP_RS01725 -1.9 -3.2 class I SAM-dependent methyltransferase family protein compare
MMP_RS01310 -1.9 -10.8 hypothetical protein compare
MMP_RS01795 -1.9 -0.9 methanogenesis marker 6 protein compare
MMP_RS01915 -1.9 -9.3 DUF354 domain-containing protein compare
MMP_RS08350 -1.9 -0.8 hypothetical protein compare
MMP_RS00250 -1.9 -13.8 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01800 -1.9 -2.5 TIGR00303 family protein compare
MMP_RS00725 -1.9 -7.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05580 -1.9 -10.2 glycosyltransferase compare
MMP_RS01290 -1.9 -9.6 class III signal peptide-containing protein compare
MMP_RS08300 -1.9 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS01885 -1.9 -3.5 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS00245 -1.8 -13.2 type II secretion system F family protein compare
MMP_RS01970 -1.8 -9.0 TIGR04279 domain-containing protein compare
MMP_RS07630 -1.8 -1.3 ATP-binding cassette domain-containing protein compare
MMP_RS06630 -1.8 -0.8 UPF0058 family protein compare
MMP_RS06395 -1.8 -2.8 ThiF family adenylyltransferase compare
MMP_RS00315 -1.8 -4.4 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS07390 -1.8 -2.0 cell division protein FtsZ compare
MMP_RS00895 -1.8 -2.5 hypothetical protein compare
MMP_RS08435 -1.8 -1.1 Era-like GTP-binding protein compare
MMP_RS01285 -1.8 -6.8 hypothetical protein compare
MMP_RS04585 -1.8 -7.9 AIR synthase related protein compare
MMP_RS01280 -1.8 -11.2 DUF515 domain-containing protein compare
MMP_RS03125 -1.8 -5.8 cell division ATPase MinD compare
MMP_RS01895 -1.8 -9.5 flippase compare
MMP_RS01910 -1.7 -6.6 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS08155 -1.7 -5.2 hypothetical protein compare
MMP_RS07575 -1.7 -3.4 RNA ligase partner protein compare
MMP_RS01225 -1.7 -3.2 DUF5379 domain-containing protein compare
MMP_RS02800 -1.7 -4.7 nucleotidyltransferase domain-containing protein compare
MMP_RS06355 -1.7 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS08645 -1.7 -4.3 UPF0179 family protein compare
MMP_RS06035 -1.7 -7.6 glycosyltransferase family 2 protein compare
MMP_RS04850 -1.7 -10.2 UPF0254 family protein compare
MMP_RS07075 -1.7 -1.8 phosphomannomutase/phosphoglucomutase compare
MMP_RS00735 -1.7 -3.9 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08370 -1.7 -0.5 cation:proton antiporter subunit C compare
MMP_RS05245 -1.7 -6.8 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07605 -1.7 -2.6 diadenylate cyclase compare
MMP_RS05345 -1.7 -4.9 hypothetical protein compare
MMP_RS01365 -1.6 -2.1 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01305 -1.6 -12.2 hypothetical protein compare
MMP_RS03205 -1.6 -1.1 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00520 -1.6 -1.3 RNA polymerase Rpb4 family protein compare
MMP_RS05425 -1.6 -3.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS03015 -1.6 -5.8 GTP 3' 8-cyclase MoaA compare
MMP_RS03110 -1.6 -3.1 glycosyltransferase family 2 protein compare
MMP_RS01920 -1.6 -8.4 glycosyltransferase family 2 protein compare
MMP_RS07355 -1.6 -0.7 transcription factor S compare
MMP_RS02135 -1.6 -2.9 DUF5612 domain-containing protein compare
MMP_RS01315 -1.6 -12.7 DUF2341 domain-containing protein compare
MMP_RS06940 -1.6 -2.7 polyprenyl diphosphate synthase compare
MMP_RS06600 -1.6 -1.1 class III signal peptide-containing protein compare
MMP_RS01220 -1.6 -5.5 hypothetical protein compare
MMP_RS07700 -1.6 -7.0 DUF1188 domain-containing protein compare
MMP_RS03140 -1.6 -6.6 hypothetical protein compare
MMP_RS07755 -1.6 -1.0 DUF555 domain-containing protein compare
MMP_RS07555 -1.6 -0.5 monovalent cation/H+ antiporter subunit E compare
MMP_RS01975 -1.5 -8.1 hypothetical protein compare
MMP_RS02190 -1.5 -1.5 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS08330 -1.5 -5.1 NADH-quinone oxidoreductase subunit H compare
MMP_RS04685 -1.5 -1.6 DUF126 domain-containing protein compare
MMP_RS02010 -1.5 -5.4 PHP domain-containing protein compare
MMP_RS05540 -1.5 -2.4 hypothetical protein compare
MMP_RS07445 -1.5 -3.8 helix-turn-helix domain-containing protein compare
MMP_RS02470 -1.5 -1.1 helix-turn-helix transcriptional regulator compare
MMP_RS07420 -1.5 -4.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06105 -1.4 -4.8 hydrogenase maturation peptidase HycI compare
MMP_RS07875 -1.4 -3.4 hypothetical protein compare
MMP_RS07525 -1.4 -3.8 4Fe-4S binding protein compare
MMP_RS05460 -1.4 -6.1 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS08855 -1.4 -7.4 hypothetical protein compare
MMP_RS03960 -1.4 -0.9 hypothetical protein compare
MMP_RS04615 -1.4 -2.6 PDGLE domain-containing protein compare
MMP_RS01745 -1.4 -4.5 AMP phosphorylase compare
MMP_RS02280 -1.4 -0.4 DUF211 domain-containing protein compare
MMP_RS00060 -1.4 -1.4 3-dehydroquinate synthase II compare
MMP_RS03145 -1.4 -3.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS08195 -1.4 -6.0 hypothetical protein compare
MMP_RS01575 -1.3 -4.4 aldolase compare
MMP_RS00730 -1.3 -2.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS04955 -1.3 -3.9 DNA topoisomerase I compare
MMP_RS03435 -1.3 -0.9 ketol-acid reductoisomerase compare
MMP_RS04485 -1.3 -5.8 putative beta-lysine N-acetyltransferase compare
MMP_RS05515 -1.3 -4.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05445 -1.3 -4.5 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS03080 -1.3 -1.8 universal stress protein compare
MMP_RS03095 -1.3 -3.4 diphthine synthase compare
MMP_RS00720 -1.3 -4.3 metal-dependent hydrolase compare
MMP_RS06215 -1.3 -1.4 30S ribosomal protein S6e compare
MMP_RS03385 -1.2 -0.7 cation diffusion facilitator family transporter compare
MMP_RS06925 -1.2 -1.7 ribonuclease VapC4 compare
MMP_RS05930 -1.2 -1.5 3-isopropylmalate dehydratase large subunit compare
MMP_RS03390 -1.2 -4.8 malate dehydrogenase compare
MMP_RS02175 -1.2 -0.5 DUF1611 domain-containing protein compare
MMP_RS08595 -1.2 -0.7 flagellar protein C compare
MMP_RS07350 -1.2 -1.1 preprotein translocase subunit Sec61beta compare
MMP_RS07695 -1.2 -2.8 DUF3236 domain-containing protein compare
MMP_RS08445 -1.2 -2.3 DUF2099 family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments