Experiment set12S366 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete sodium bromide 250 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS08720 -6.4 -1.4 4Fe-4S binding protein compare
MMP_RS00300 -5.9 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07545 -5.2 -0.8 HTH domain-containing protein compare
MMP_RS07555 -4.5 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS01960 -3.8 -1.2 hypothetical protein compare
MMP_RS03315 -3.3 -1.3 ferrous iron transport protein A compare
MMP_RS08790 -3.0 -2.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS07355 -2.8 -0.9 transcription factor S compare
MMP_RS02900 -2.8 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01545 -2.7 -1.2 CBS domain-containing protein compare
MMP_RS02175 -2.7 -0.7 DUF1611 domain-containing protein compare
MMP_RS01955 -2.6 -2.3 hypothetical protein compare
MMP_RS00110 -2.4 -2.5 hypothetical protein compare
MMP_RS07635 -2.4 -6.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04480 -2.4 -15.0 lysine 2 3-aminomutase compare
MMP_RS08435 -2.3 -2.0 Era-like GTP-binding protein compare
MMP_RS04485 -2.3 -10.9 putative beta-lysine N-acetyltransferase compare
MMP_RS08300 -2.1 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS03445 -2.1 -0.9 methanogenesis marker 17 protein compare
MMP_RS01755 -2.1 -1.3 DUF2097 domain-containing protein compare
MMP_RS06295 -2.1 -7.5 methanogenesis marker 14 protein compare
MMP_RS08820 -2.1 -4.8 hypothetical protein compare
MMP_RS01265 -2.1 -3.4 hypothetical protein compare
MMP_RS02800 -2.0 -6.2 nucleotidyltransferase domain-containing protein compare
MMP_RS03035 -2.0 -2.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05920 -2.0 -0.6 50S ribosomal protein L37e compare
MMP_RS06350 -1.9 -5.6 HesA/MoeB/ThiF family protein compare
MMP_RS00040 -1.9 -4.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS07420 -1.9 -4.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08745 -1.9 -5.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04720 -1.9 -1.7 DedA family protein compare
MMP_RS00985 -1.9 -6.6 CDC48 family AAA ATPase compare
MMP_RS01500 -1.9 -2.2 CBS domain-containing protein compare
MMP_RS05540 -1.9 -3.0 hypothetical protein compare
MMP_RS04955 -1.9 -5.0 DNA topoisomerase I compare
MMP_RS03640 -1.8 -2.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS00515 -1.8 -0.8 DUF655 domain-containing protein compare
MMP_RS06630 -1.8 -0.7 UPF0058 family protein compare
MMP_RS01175 -1.8 -2.8 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02145 -1.8 -3.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS06525 -1.8 -1.1 YciI family protein compare
MMP_RS08210 -1.8 -1.9 phosphatidylglycerophosphatase A compare
MMP_RS03700 -1.7 -6.2 sodium:proton antiporter compare
MMP_RS07605 -1.7 -3.3 diadenylate cyclase compare
MMP_RS04710 -1.7 -1.4 hypothetical protein compare
MMP_RS01365 -1.7 -1.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01795 -1.7 -0.8 methanogenesis marker 6 protein compare
MMP_RS05640 -1.7 -4.7 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS08645 -1.7 -5.0 UPF0179 family protein compare
MMP_RS03435 -1.7 -1.4 ketol-acid reductoisomerase compare
MMP_RS01085 -1.7 -1.7 hypothetical protein compare
MMP_RS03080 -1.6 -2.5 universal stress protein compare
MMP_RS01225 -1.6 -4.0 DUF5379 domain-containing protein compare
MMP_RS06355 -1.6 -1.7 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05815 -1.6 -2.0 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS01610 -1.6 -2.7 hypothetical protein compare
MMP_RS01380 -1.6 -2.9 PHP domain-containing protein compare
MMP_RS06940 -1.6 -2.6 polyprenyl diphosphate synthase compare
MMP_RS08860 -1.6 -5.3 MinD/ParA family protein compare
MMP_RS04790 -1.6 -6.7 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS07845 -1.6 -2.4 LL-diaminopimelate aminotransferase compare
MMP_RS07380 -1.6 -1.6 transcription elongation factor Spt5 compare
MMP_RS04585 -1.5 -6.1 AIR synthase related protein compare
MMP_RS00915 -1.5 -3.9 DUF116 domain-containing protein compare
MMP_RS03600 -1.5 -1.8 triose-phosphate isomerase compare
MMP_RS07750 -1.5 -3.0 DUF357 domain-containing protein compare
MMP_RS06400 -1.5 -1.1 4Fe-4S binding protein compare
MMP_RS00060 -1.5 -1.6 3-dehydroquinate synthase II compare
MMP_RS05425 -1.5 -2.8 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01800 -1.5 -2.1 TIGR00303 family protein compare
MMP_RS01725 -1.5 -2.4 class I SAM-dependent methyltransferase family protein compare
MMP_RS07730 -1.5 -1.6 pyruvate synthase subunit beta compare
MMP_RS07350 -1.5 -1.6 preprotein translocase subunit Sec61beta compare
MMP_RS04615 -1.5 -2.0 PDGLE domain-containing protein compare
MMP_RS02245 -1.4 -1.6 hypothetical protein compare
MMP_RS05245 -1.4 -5.8 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS04780 -1.4 -1.9 ribonuclease P compare
MMP_RS08675 -1.4 -2.1 class III signal peptide-containing protein compare
MMP_RS06670 -1.4 -2.7 glucose-6-phosphate isomerase compare
MMP_RS00895 -1.4 -3.3 hypothetical protein compare
MMP_RS05295 -1.4 -7.6 minichromosome maintenance protein MCM compare
MMP_RS07755 -1.4 -1.0 DUF555 domain-containing protein compare
MMP_RS08855 -1.4 -5.8 hypothetical protein compare
MMP_RS08440 -1.4 -2.4 cell division protein SepF compare
MMP_RS05345 -1.4 -3.6 hypothetical protein compare
MMP_RS02235 -1.4 -5.9 CBS domain-containing protein compare
MMP_RS04900 -1.4 -11.1 hypothetical protein compare
MMP_RS01270 -1.4 -9.4 prepilin peptidase compare
MMP_RS01905 -1.4 -5.4 glycosyltransferase compare
MMP_RS00325 -1.4 -1.0 RNA-binding protein compare
MMP_RS03400 -1.4 -1.7 archease compare
MMP_RS01925 -1.3 -4.3 DUF1616 domain-containing protein compare
MMP_RS05910 -1.3 -2.1 cell division ATPase MinD compare
MMP_RS03250 -1.3 -2.3 MJ1244 family protein compare
MMP_RS02195 -1.3 -1.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06865 -1.3 -2.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS01195 -1.3 -1.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07390 -1.3 -0.9 cell division protein FtsZ compare
MMP_RS01900 -1.3 -6.2 hypothetical protein compare
MMP_RS01275 -1.3 -3.7 class III signal peptide-containing protein compare
MMP_RS00535 -1.3 -0.9 TIGR00375 family protein compare
MMP_RS02010 -1.3 -3.6 PHP domain-containing protein compare
MMP_RS05535 -1.3 -4.3 hypothetical protein compare
MMP_RS05845 -1.3 -1.3 tRNA-intron lyase compare
MMP_RS07695 -1.3 -4.6 DUF3236 domain-containing protein compare
MMP_RS00115 -1.2 -6.4 radical SAM protein compare
MMP_RS05550 -1.2 -0.6 cation:proton antiporter compare
MMP_RS00245 -1.2 -9.8 type II secretion system F family protein compare
MMP_RS06725 -1.2 -3.4 hypothetical protein compare
MMP_RS00125 -1.2 -1.0 DUF2798 domain-containing protein compare
MMP_RS03485 -1.2 -4.3 TIGR00267 family protein compare
MMP_RS05925 -1.2 -2.4 small nuclear ribonucleoprotein compare
MMP_RS03205 -1.2 -1.0 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07860 -1.2 -0.4 hypothetical protein compare
MMP_RS07600 -1.2 -1.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS02135 -1.2 -2.9 DUF5612 domain-containing protein compare
MMP_RS00685 -1.2 -2.5 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01290 -1.2 -5.6 class III signal peptide-containing protein compare
MMP_RS03025 -1.2 -2.5 molybdenum cofactor guanylyltransferase compare
MMP_RS08635 -1.1 -1.3 UbiA family prenyltransferase compare
MMP_RS06020 -1.1 -2.2 archaeoflavoprotein AfpA compare
MMP_RS00695 -1.1 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS03015 -1.1 -4.5 GTP 3' 8-cyclase MoaA compare
MMP_RS09020 -1.1 -1.1 hypothetical protein compare
MMP_RS02240 -1.1 -1.7 methanogenesis marker 7 protein compare
MMP_RS06105 -1.1 -4.5 hydrogenase maturation peptidase HycI compare
MMP_RS01180 -1.1 -1.5 XTP/dITP diphosphatase compare
MMP_RS01295 -1.1 -6.2 hypothetical protein compare
MMP_RS01880 -1.1 -3.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS01310 -1.1 -6.4 hypothetical protein compare
MMP_RS01895 -1.1 -5.7 flippase compare
MMP_RS03095 -1.1 -2.7 diphthine synthase compare
MMP_RS01305 -1.1 -8.3 hypothetical protein compare
MMP_RS06285 -1.1 -1.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS05635 -1.1 -3.1 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS01600 -1.1 -1.4 50S ribosomal protein L15e compare
MMP_RS05515 -1.1 -3.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS00240 -1.1 -5.4 type II secretion system F family protein compare
MMP_RS06895 -1.1 -1.1 selenocysteine-specific translation elongation factor compare
MMP_RS07200 -1.1 -3.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS04090 -1.1 -1.7 hypothetical protein compare
MMP_RS00305 -1.1 -1.1 phosphoribosyl-ATP diphosphatase compare
MMP_RS07710 -1.1 -3.0 cell division protein FtsZ compare
MMP_RS08760 -1.0 -1.3 hypothetical protein compare
MMP_RS00880 -1.0 -2.3 ribosome assembly RNA-binding protein YhbY compare
MMP_RS01285 -1.0 -5.5 hypothetical protein compare
MMP_RS00310 -1.0 -5.1 CBS domain-containing protein compare
MMP_RS04785 -1.0 -6.0 hypothetical protein compare
MMP_RS09055 -1.0 -0.7 CAP domain-containing protein compare
MMP_RS00250 -1.0 -6.5 Flp pilus assembly complex ATPase component TadA compare
MMP_RS08195 -1.0 -3.7 hypothetical protein compare
MMP_RS01830 -1.0 -1.0 tRNA-Val compare
MMP_RS05955 -1.0 -1.3 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS07685 -1.0 -3.9 TIGR01212 family radical SAM protein compare
MMP_RS04685 -1.0 -1.3 DUF126 domain-containing protein compare
MMP_RS07875 -1.0 -2.0 hypothetical protein compare
MMP_RS07700 -1.0 -4.8 DUF1188 domain-containing protein compare
MMP_RS08650 -1.0 -1.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03580 -1.0 -1.8 signal recognition particle-docking protein FtsY compare
MMP_RS00720 -1.0 -3.9 metal-dependent hydrolase compare
MMP_RS01315 -1.0 -7.8 DUF2341 domain-containing protein compare
MMP_RS04690 -1.0 -2.1 class III signal peptide-containing protein compare
MMP_RS04850 -0.9 -6.4 UPF0254 family protein compare
MMP_RS07445 -0.9 -2.7 helix-turn-helix domain-containing protein compare
MMP_RS02190 -0.9 -1.5 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS06340 -0.9 -3.5 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02020 -0.9 -1.5 gamma-glutamylcyclotransferase compare
MMP_RS01280 -0.9 -5.8 DUF515 domain-containing protein compare
MMP_RS02930 -0.9 -1.9 class I SAM-dependent methyltransferase compare
MMP_RS08240 -0.9 -2.8 methanogenesis marker 16 metalloprotein compare
MMP_RS02345 -0.9 -1.7 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06325 -0.9 -0.7 hypothetical protein compare
MMP_RS08660 -0.9 -3.8 DHH family phosphoesterase compare
MMP_RS03340 -0.9 -0.6 ABC transporter ATP-binding protein compare
MMP_RS00810 -0.9 -2.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03210 -0.9 -5.6 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS06395 -0.9 -1.5 ThiF family adenylyltransferase compare
MMP_RS00735 -0.9 -2.3 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00725 -0.9 -2.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06980 -0.9 -2.6 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01075 -0.9 -0.8 hypothetical protein compare
MMP_RS03535 -0.8 -1.6 helix-turn-helix transcriptional regulator compare
MMP_RS06885 -0.8 -1.3 50S ribosome-binding GTPase compare
MMP_RS05765 -0.8 -2.3 M42 family metallopeptidase compare
MMP_RS00730 -0.8 -2.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS05445 -0.8 -2.8 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS02470 -0.8 -0.6 helix-turn-helix transcriptional regulator compare
MMP_RS02280 -0.8 -0.3 DUF211 domain-containing protein compare
MMP_RS08200 -0.8 -5.3 archaeosine synthase subunit alpha compare
MMP_RS02545 -0.8 -2.2 hypothetical protein compare
MMP_RS06485 -0.8 -0.5 zinc ribbon domain-containing protein compare
MMP_RS00965 -0.8 -1.0 hypothetical protein compare
MMP_RS00320 -0.8 -0.8 class I SAM-dependent methyltransferase compare
MMP_RS07075 -0.8 -1.1 phosphomannomutase/phosphoglucomutase compare
MMP_RS07580 -0.8 -0.9 DUF356 domain-containing protein compare
MMP_RS01910 -0.7 -2.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS03460 -0.7 -3.3 U32 family peptidase compare
MMP_RS07425 -0.7 -2.0 GTP-binding protein compare
MMP_RS06435 -0.7 -1.8 CBS domain-containing protein compare
MMP_RS01665 -0.7 -1.7 DUF2111 domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress sodium bromide across organisms