Experiment set12S362 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete Novobiocin sodium salt 0.05 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS08785 -6.6 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS01755 -5.9 -1.1 DUF2097 domain-containing protein compare
MMP_RS00300 -5.9 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS07555 -5.9 -0.8 monovalent cation/H+ antiporter subunit E compare
MMP_RS03315 -5.3 -1.2 ferrous iron transport protein A compare
MMP_RS05920 -5.3 -0.7 50S ribosomal protein L37e compare
MMP_RS08720 -4.2 -2.0 4Fe-4S binding protein compare
MMP_RS03475 -4.1 -0.7 hypothetical protein compare
MMP_RS07845 -3.8 -2.9 LL-diaminopimelate aminotransferase compare
MMP_RS00515 -3.6 -1.1 DUF655 domain-containing protein compare
MMP_RS02175 -3.6 -0.8 DUF1611 domain-containing protein compare
MMP_RS03435 -3.5 -1.6 ketol-acid reductoisomerase compare
MMP_RS08300 -2.7 -1.4 metal-sulfur cluster assembly factor compare
MMP_RS06350 -2.5 -4.8 HesA/MoeB/ThiF family protein compare
MMP_RS01900 -2.5 -9.8 hypothetical protein compare
MMP_RS01925 -2.5 -7.4 DUF1616 domain-containing protein compare
MMP_RS06840 -2.3 -1.2 DNA-directed RNA polymerase subunit N compare
MMP_RS01905 -2.3 -9.2 glycosyltransferase compare
MMP_RS05425 -2.3 -3.4 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01265 -2.3 -3.8 hypothetical protein compare
MMP_RS01500 -2.2 -1.2 CBS domain-containing protein compare
MMP_RS00520 -2.1 -1.1 RNA polymerase Rpb4 family protein compare
MMP_RS07075 -2.1 -2.2 phosphomannomutase/phosphoglucomutase compare
MMP_RS01325 -2.1 -1.4 dihydroneopterin aldolase family protein compare
MMP_RS01175 -2.1 -2.9 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08195 -2.0 -6.3 hypothetical protein compare
MMP_RS01195 -2.0 -1.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07635 -2.0 -5.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS02145 -1.9 -3.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS06625 -1.9 -1.5 DNA primase compare
MMP_RS01890 -1.8 -2.3 nucleotide sugar dehydrogenase compare
MMP_RS06110 -1.8 -1.8 ATP-dependent protease LonB compare
MMP_RS08435 -1.7 -1.4 Era-like GTP-binding protein compare
MMP_RS05550 -1.7 -0.7 cation:proton antiporter compare
MMP_RS07420 -1.7 -2.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01885 -1.7 -3.9 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS00695 -1.7 -1.0 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06670 -1.7 -3.6 glucose-6-phosphate isomerase compare
MMP_RS03600 -1.7 -1.6 triose-phosphate isomerase compare
MMP_RS07755 -1.6 -1.2 DUF555 domain-containing protein compare
MMP_RS03960 -1.6 -1.1 hypothetical protein compare
MMP_RS07710 -1.6 -4.5 cell division protein FtsZ compare
MMP_RS06355 -1.6 -1.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07390 -1.6 -1.8 cell division protein FtsZ compare
MMP_RS04720 -1.6 -1.2 DedA family protein compare
MMP_RS07380 -1.6 -1.5 transcription elongation factor Spt5 compare
MMP_RS03080 -1.6 -2.7 universal stress protein compare
MMP_RS06395 -1.6 -2.0 ThiF family adenylyltransferase compare
MMP_RS06725 -1.5 -4.6 hypothetical protein compare
MMP_RS06885 -1.5 -1.7 50S ribosome-binding GTPase compare
MMP_RS08745 -1.5 -3.5 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01270 -1.5 -8.9 prepilin peptidase compare
MMP_RS00040 -1.5 -3.8 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS01910 -1.5 -4.8 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS06295 -1.5 -4.3 methanogenesis marker 14 protein compare
MMP_RS05515 -1.5 -4.1 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS01975 -1.5 -6.7 hypothetical protein compare
MMP_RS08645 -1.5 -4.4 UPF0179 family protein compare
MMP_RS08855 -1.5 -4.9 hypothetical protein compare
MMP_RS03035 -1.5 -1.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06105 -1.5 -5.2 hydrogenase maturation peptidase HycI compare
MMP_RS01020 -1.5 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06120 -1.4 -1.2 UPF0147 family protein compare
MMP_RS04090 -1.4 -2.0 hypothetical protein compare
MMP_RS03110 -1.4 -2.5 glycosyltransferase family 2 protein compare
MMP_RS07355 -1.4 -0.8 transcription factor S compare
MMP_RS01875 -1.4 -4.7 N-acetyltransferase compare
MMP_RS06340 -1.4 -4.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04900 -1.4 -9.8 hypothetical protein compare
MMP_RS08675 -1.4 -2.6 class III signal peptide-containing protein compare
MMP_RS00915 -1.4 -3.7 DUF116 domain-containing protein compare
MMP_RS03125 -1.4 -2.8 cell division ATPase MinD compare
MMP_RS00730 -1.4 -3.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02345 -1.4 -2.2 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01285 -1.3 -4.8 hypothetical protein compare
MMP_RS08210 -1.3 -1.0 phosphatidylglycerophosphatase A compare
MMP_RS05555 -1.3 -1.2 DUF4040 domain-containing protein compare
MMP_RS08790 -1.3 -0.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS00725 -1.3 -3.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS07200 -1.3 -3.5 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01085 -1.3 -1.6 hypothetical protein compare
MMP_RS00685 -1.3 -2.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00240 -1.3 -6.4 type II secretion system F family protein compare
MMP_RS01880 -1.3 -3.7 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS06980 -1.3 -6.1 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS03015 -1.3 -4.1 GTP 3' 8-cyclase MoaA compare
MMP_RS00320 -1.3 -1.4 class I SAM-dependent methyltransferase compare
MMP_RS06630 -1.3 -0.6 UPF0058 family protein compare
MMP_RS07955 -1.3 -2.8 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06895 -1.3 -1.2 selenocysteine-specific translation elongation factor compare
MMP_RS07330 -1.2 -8.4 membrane protein compare
MMP_RS01305 -1.2 -8.4 hypothetical protein compare
MMP_RS07695 -1.2 -4.1 DUF3236 domain-containing protein compare
MMP_RS03700 -1.2 -4.1 sodium:proton antiporter compare
MMP_RS03400 -1.2 -1.2 archease compare
MMP_RS00250 -1.2 -7.4 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01610 -1.2 -2.2 hypothetical protein compare
MMP_RS02010 -1.2 -5.3 PHP domain-containing protein compare
MMP_RS01745 -1.2 -4.2 AMP phosphorylase compare
MMP_RS01290 -1.2 -7.0 class III signal peptide-containing protein compare
MMP_RS03025 -1.2 -2.8 molybdenum cofactor guanylyltransferase compare
MMP_RS07545 -1.2 -0.7 HTH domain-containing protein compare
MMP_RS02235 -1.2 -6.1 CBS domain-containing protein compare
MMP_RS01310 -1.2 -8.0 hypothetical protein compare
MMP_RS01545 -1.2 -0.9 CBS domain-containing protein compare
MMP_RS00245 -1.2 -8.2 type II secretion system F family protein compare
MMP_RS00315 -1.2 -2.9 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00720 -1.2 -4.1 metal-dependent hydrolase compare
MMP_RS01915 -1.2 -5.5 DUF354 domain-containing protein compare
MMP_RS01155 -1.2 -2.9 XRE family transcriptional regulator compare
MMP_RS05635 -1.2 -4.3 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS01315 -1.1 -9.2 DUF2341 domain-containing protein compare
MMP_RS00900 -1.1 -1.1 50S ribosomal protein L39e compare
MMP_RS05535 -1.1 -2.6 hypothetical protein compare
MMP_RS01955 -1.1 -1.2 hypothetical protein compare
MMP_RS02790 -1.1 -0.8 class III signal peptide-containing protein compare
MMP_RS01380 -1.1 -2.2 PHP domain-containing protein compare
MMP_RS00750 -1.1 -1.3 fumarate hydratase compare
MMP_RS05640 -1.1 -2.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS07875 -1.1 -2.9 hypothetical protein compare
MMP_RS01970 -1.1 -5.4 TIGR04279 domain-containing protein compare
MMP_RS01225 -1.1 -2.9 DUF5379 domain-containing protein compare
MMP_RS08320 -1.1 -2.1 molybdopterin molybdotransferase MoeA compare
MMP_RS01795 -1.0 -0.8 methanogenesis marker 6 protein compare
MMP_RS03390 -1.0 -3.3 malate dehydrogenase compare
MMP_RS06600 -1.0 -0.8 class III signal peptide-containing protein compare
MMP_RS01295 -1.0 -3.9 hypothetical protein compare
MMP_RS05295 -1.0 -4.7 minichromosome maintenance protein MCM compare
MMP_RS07730 -1.0 -0.8 pyruvate synthase subunit beta compare
MMP_RS01300 -1.0 -7.0 hypothetical protein compare
MMP_RS08820 -1.0 -2.2 hypothetical protein compare
MMP_RS04850 -1.0 -6.4 UPF0254 family protein compare
MMP_RS01280 -1.0 -6.3 DUF515 domain-containing protein compare
MMP_RS08600 -1.0 -1.3 flagellar protein D compare
MMP_RS06525 -1.0 -0.9 YciI family protein compare
MMP_RS07115 -1.0 -3.0 MBL fold metallo-hydrolase compare
MMP_RS04195 -0.9 -1.6 flavodoxin compare
MMP_RS06435 -0.9 -3.3 CBS domain-containing protein compare
MMP_RS04585 -0.9 -4.4 AIR synthase related protein compare
MMP_RS05695 -0.9 -2.5 phospholipase D-like domain-containing protein compare
MMP_RS01960 -0.9 -0.6 hypothetical protein compare
MMP_RS03485 -0.9 -1.5 TIGR00267 family protein compare
MMP_RS05580 -0.9 -5.7 glycosyltransferase compare
MMP_RS09055 -0.9 -0.7 CAP domain-containing protein compare
MMP_RS01800 -0.9 -1.5 TIGR00303 family protein compare
MMP_RS01920 -0.9 -4.7 glycosyltransferase family 2 protein compare
MMP_RS03420 -0.9 -1.7 acetolactate synthase small subunit compare
MMP_RS01365 -0.9 -1.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS04710 -0.9 -1.2 hypothetical protein compare
MMP_RS06940 -0.9 -2.0 polyprenyl diphosphate synthase compare
MMP_RS03640 -0.9 -1.3 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04955 -0.9 -2.3 DNA topoisomerase I compare
MMP_RS08330 -0.9 -2.7 NADH-quinone oxidoreductase subunit H compare
MMP_RS01275 -0.9 -3.6 class III signal peptide-containing protein compare
MMP_RS05945 -0.9 -2.7 CBS domain-containing protein compare
MMP_RS00555 -0.9 -2.2 MFS transporter compare
MMP_RS08370 -0.9 -0.4 cation:proton antiporter subunit C compare
MMP_RS05765 -0.9 -2.4 M42 family metallopeptidase compare
MMP_RS03550 -0.9 -0.9 DUF2124 domain-containing protein compare
MMP_RS04695 -0.9 -2.7 selenide water dikinase SelD compare
MMP_RS05250 -0.9 -1.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00895 -0.8 -1.8 hypothetical protein compare
MMP_RS06035 -0.8 -4.1 glycosyltransferase family 2 protein compare
MMP_RS07525 -0.8 -2.5 4Fe-4S binding protein compare
MMP_RS01665 -0.8 -1.5 DUF2111 domain-containing protein compare
MMP_RS04360 -0.8 -1.6 hypothetical protein compare
MMP_RS04485 -0.8 -5.0 putative beta-lysine N-acetyltransferase compare
MMP_RS05430 -0.8 -2.5 TIGR00288 family NYN domain-containing protein compare
MMP_RS03580 -0.8 -2.2 signal recognition particle-docking protein FtsY compare
MMP_RS08440 -0.8 -0.9 cell division protein SepF compare
MMP_RS02290 -0.8 -2.7 MBL fold metallo-hydrolase compare
MMP_RS06230 -0.8 -1.1 helix-turn-helix domain-containing protein compare
MMP_RS03305 -0.8 -2.6 winged helix-turn-helix domain-containing protein compare
MMP_RS06535 -0.8 -1.9 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS08750 -0.8 -1.5 hypothetical protein compare
MMP_RS08240 -0.8 -2.6 methanogenesis marker 16 metalloprotein compare
MMP_RS03155 -0.8 -2.5 precorrin-6A reductase compare
MMP_RS06370 -0.8 -1.4 biotin synthase BioB compare
MMP_RS08835 -0.8 -2.4 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS06730 -0.7 -0.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS01075 -0.7 -0.7 hypothetical protein compare
MMP_RS03250 -0.7 -1.4 MJ1244 family protein compare
MMP_RS05245 -0.7 -2.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS05950 -0.7 -2.6 nickel-dependent hydrogenase large subunit compare
MMP_RS05255 -0.7 -4.1 CBS domain-containing protein compare
MMP_RS02745 -0.7 -0.9 hypothetical protein compare
MMP_RS01100 -0.7 -0.6 ABC transporter ATP-binding protein compare
MMP_RS09045 -0.7 -4.1 class III signal peptide-containing protein compare
MMP_RS03145 -0.7 -1.9 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS08350 -0.7 -0.5 hypothetical protein compare
MMP_RS06855 -0.7 -2.6 hypothetical protein compare
MMP_RS01865 -0.7 -0.7 GPR1/FUN34/YaaH family transporter compare
MMP_RS08860 -0.7 -2.3 MinD/ParA family protein compare
MMP_RS08200 -0.7 -4.4 archaeosine synthase subunit alpha compare
MMP_RS08355 -0.7 -1.7 Na(+)/H(+) antiporter subunit B compare
MMP_RS07700 -0.7 -3.4 DUF1188 domain-containing protein compare
MMP_RS02720 -0.7 -1.1 molybdate ABC transporter substrate-binding protein compare
MMP_RS01140 -0.7 -1.5 molybdate ABC transporter permease subunit compare
MMP_RS02395 -0.7 -2.8 hypothetical protein compare
MMP_RS07365 -0.7 -3.4 2-phosphoglycerate kinase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Novobiocin sodium salt across organisms