Experiment set12S343 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete sodium iodide 250 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS05920 -4.9 -0.5 50S ribosomal protein L37e compare
MMP_RS06630 -3.5 -0.7 UPF0058 family protein compare
MMP_RS03315 -3.4 -0.8 ferrous iron transport protein A compare
MMP_RS06350 -2.9 -4.2 HesA/MoeB/ThiF family protein compare
MMP_RS01385 -2.8 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06730 -2.5 -1.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS05355 -2.4 -0.7 hypothetical protein compare
MMP_RS01665 -2.4 -3.6 DUF2111 domain-containing protein compare
MMP_RS07735 -2.3 -0.7 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS07355 -2.2 -0.7 transcription factor S compare
MMP_RS06885 -2.2 -2.0 50S ribosome-binding GTPase compare
MMP_RS04900 -2.1 -15.2 hypothetical protein compare
MMP_RS08720 -2.1 -1.1 4Fe-4S binding protein compare
MMP_RS05550 -2.1 -0.6 cation:proton antiporter compare
MMP_RS05925 -2.1 -2.4 small nuclear ribonucleoprotein compare
MMP_RS01545 -2.0 -0.9 CBS domain-containing protein compare
MMP_RS08715 -2.0 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS05425 -1.9 -3.8 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00915 -1.9 -5.4 DUF116 domain-containing protein compare
MMP_RS02800 -1.9 -5.1 nucleotidyltransferase domain-containing protein compare
MMP_RS06315 -1.9 -0.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS04955 -1.9 -5.4 DNA topoisomerase I compare
MMP_RS01085 -1.9 -1.4 hypothetical protein compare
MMP_RS03080 -1.9 -2.3 universal stress protein compare
MMP_RS01610 -1.8 -2.3 hypothetical protein compare
MMP_RS07635 -1.8 -6.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04615 -1.8 -3.1 PDGLE domain-containing protein compare
MMP_RS08785 -1.8 -0.7 RNA-protein complex protein Nop10 compare
MMP_RS00735 -1.7 -3.0 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00110 -1.7 -1.8 hypothetical protein compare
MMP_RS03400 -1.7 -1.8 archease compare
MMP_RS01755 -1.7 -1.0 DUF2097 domain-containing protein compare
MMP_RS07350 -1.7 -1.5 preprotein translocase subunit Sec61beta compare
MMP_RS01175 -1.6 -2.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS05460 -1.6 -6.0 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS01195 -1.6 -0.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01830 -1.6 -1.0 tRNA-Val compare
MMP_RS01265 -1.6 -2.5 hypothetical protein compare
MMP_RS07075 -1.5 -2.9 phosphomannomutase/phosphoglucomutase compare
MMP_RS08675 -1.5 -2.1 class III signal peptide-containing protein compare
MMP_RS06355 -1.5 -1.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06295 -1.5 -4.2 methanogenesis marker 14 protein compare
MMP_RS04710 -1.5 -1.3 hypothetical protein compare
MMP_RS05700 -1.4 -5.8 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS08165 -1.4 -1.3 phosphoglycerate dehydrogenase compare
MMP_RS06105 -1.4 -4.8 hydrogenase maturation peptidase HycI compare
MMP_RS07600 -1.4 -0.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04485 -1.4 -7.6 putative beta-lysine N-acetyltransferase compare
MMP_RS08820 -1.4 -2.8 hypothetical protein compare
MMP_RS07750 -1.4 -3.4 DUF357 domain-containing protein compare
MMP_RS08210 -1.4 -1.5 phosphatidylglycerophosphatase A compare
MMP_RS02245 -1.4 -1.8 hypothetical protein compare
MMP_RS01575 -1.4 -3.8 aldolase compare
MMP_RS07695 -1.3 -3.7 DUF3236 domain-containing protein compare
MMP_RS03390 -1.3 -4.7 malate dehydrogenase compare
MMP_RS01720 -1.3 -1.3 replication factor C large subunit compare
MMP_RS02175 -1.3 -0.4 DUF1611 domain-containing protein compare
MMP_RS00720 -1.3 -5.0 metal-dependent hydrolase compare
MMP_RS01420 -1.3 -1.2 hypothetical protein compare
MMP_RS04780 -1.3 -1.4 ribonuclease P compare
MMP_RS03445 -1.3 -0.6 methanogenesis marker 17 protein compare
MMP_RS03600 -1.3 -1.1 triose-phosphate isomerase compare
MMP_RS02240 -1.3 -1.8 methanogenesis marker 7 protein compare
MMP_RS08940 -1.2 -0.8 MetS family NSS transporter small subunit compare
MMP_RS01225 -1.2 -2.2 DUF5379 domain-containing protein compare
MMP_RS01325 -1.2 -1.1 dihydroneopterin aldolase family protein compare
MMP_RS08195 -1.2 -5.3 hypothetical protein compare
MMP_RS08645 -1.2 -4.3 UPF0179 family protein compare
MMP_RS08995 -1.2 -0.7 hypothetical protein compare
MMP_RS03960 -1.2 -0.7 hypothetical protein compare
MMP_RS02605 -1.2 -0.5 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS03700 -1.2 -4.5 sodium:proton antiporter compare
MMP_RS05540 -1.2 -2.6 hypothetical protein compare
MMP_RS06600 -1.2 -0.7 class III signal peptide-containing protein compare
MMP_RS03580 -1.2 -2.0 signal recognition particle-docking protein FtsY compare
MMP_RS02135 -1.2 -2.8 DUF5612 domain-containing protein compare
MMP_RS07420 -1.2 -2.8 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS03440 -1.2 -0.6 MoaD/ThiS family protein compare
MMP_RS01955 -1.2 -1.4 hypothetical protein compare
MMP_RS05535 -1.2 -2.7 hypothetical protein compare
MMP_RS00985 -1.2 -2.8 CDC48 family AAA ATPase compare
MMP_RS08435 -1.2 -0.9 Era-like GTP-binding protein compare
MMP_RS03035 -1.2 -1.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01960 -1.1 -0.7 hypothetical protein compare
MMP_RS04480 -1.1 -7.1 lysine 2 3-aminomutase compare
MMP_RS01075 -1.1 -1.3 hypothetical protein compare
MMP_RS08240 -1.1 -3.4 methanogenesis marker 16 metalloprotein compare
MMP_RS00450 -1.1 -0.9 4Fe-4S binding protein compare
MMP_RS01285 -1.1 -5.6 hypothetical protein compare
MMP_RS00245 -1.1 -8.5 type II secretion system F family protein compare
MMP_RS07815 -1.1 -0.6 DUF2120 domain-containing protein compare
MMP_RS01315 -1.1 -9.1 DUF2341 domain-containing protein compare
MMP_RS01270 -1.1 -6.8 prepilin peptidase compare
MMP_RS02235 -1.1 -3.1 CBS domain-containing protein compare
MMP_RS02195 -1.1 -1.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00900 -1.1 -0.9 50S ribosomal protein L39e compare
MMP_RS03015 -1.1 -3.9 GTP 3' 8-cyclase MoaA compare
MMP_RS03090 -1.0 -3.0 cation:proton antiporter compare
MMP_RS01310 -1.0 -6.1 hypothetical protein compare
MMP_RS09035 -1.0 -1.7 hypothetical protein compare
MMP_RS07005 -1.0 -0.3 4Fe-4S binding protein compare
MMP_RS04585 -1.0 -6.1 AIR synthase related protein compare
MMP_RS00250 -1.0 -7.1 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00725 -1.0 -2.5 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS03450 -1.0 -1.1 glycine synthesis protein GlyXS (from data) compare
MMP_RS06970 -1.0 -3.7 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS01305 -1.0 -7.2 hypothetical protein compare
MMP_RS00240 -1.0 -6.6 type II secretion system F family protein compare
MMP_RS03250 -1.0 -2.0 MJ1244 family protein compare
MMP_RS05515 -1.0 -2.5 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS02940 -1.0 -4.0 TatD family hydrolase compare
MMP_RS05640 -1.0 -2.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS00115 -1.0 -4.9 radical SAM protein compare
MMP_RS02010 -1.0 -3.0 PHP domain-containing protein compare
MMP_RS03110 -1.0 -3.2 glycosyltransferase family 2 protein compare
MMP_RS01800 -1.0 -1.6 TIGR00303 family protein compare
MMP_RS01925 -1.0 -3.9 DUF1616 domain-containing protein compare
MMP_RS04850 -1.0 -6.4 UPF0254 family protein compare
MMP_RS02900 -1.0 -0.3 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01275 -1.0 -3.8 class III signal peptide-containing protein compare
MMP_RS06230 -0.9 -1.1 helix-turn-helix domain-containing protein compare
MMP_RS03095 -0.9 -2.1 diphthine synthase compare
MMP_RS02145 -0.9 -3.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS06725 -0.9 -4.0 hypothetical protein compare
MMP_RS08600 -0.9 -1.3 flagellar protein D compare
MMP_RS04790 -0.9 -5.2 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS01295 -0.9 -4.5 hypothetical protein compare
MMP_RS07845 -0.9 -1.6 LL-diaminopimelate aminotransferase compare
MMP_RS05295 -0.9 -4.5 minichromosome maintenance protein MCM compare
MMP_RS00810 -0.9 -3.0 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS08790 -0.9 -0.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS03485 -0.9 -2.4 TIGR00267 family protein compare
MMP_RS00895 -0.9 -1.9 hypothetical protein compare
MMP_RS01005 -0.9 -0.6 riboflavin synthase compare
MMP_RS01180 -0.9 -1.0 XTP/dITP diphosphatase compare
MMP_RS08855 -0.9 -4.2 hypothetical protein compare
MMP_RS07200 -0.9 -2.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00380 -0.9 -1.6 P-II family nitrogen regulator compare
MMP_RS06395 -0.9 -1.5 ThiF family adenylyltransferase compare
MMP_RS00620 -0.9 -1.6 4Fe-4S binding protein compare
MMP_RS05245 -0.9 -3.7 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS01290 -0.9 -4.5 class III signal peptide-containing protein compare
MMP_RS08200 -0.9 -5.2 archaeosine synthase subunit alpha compare
MMP_RS00730 -0.9 -2.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02780 -0.9 -3.9 hypothetical protein compare
MMP_RS00740 -0.8 -1.2 cyclase family protein compare
MMP_RS01280 -0.8 -5.5 DUF515 domain-containing protein compare
MMP_RS07330 -0.8 -6.0 membrane protein compare
MMP_RS06170 -0.8 -2.5 ABC transporter ATP-binding protein compare
MMP_RS06980 -0.8 -2.9 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS01020 -0.8 -0.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02930 -0.8 -1.7 class I SAM-dependent methyltransferase compare
MMP_RS07700 -0.8 -4.2 DUF1188 domain-containing protein compare
MMP_RS08385 -0.8 -2.5 ABC transporter substrate-binding protein compare
MMP_RS00520 -0.8 -0.7 RNA polymerase Rpb4 family protein compare
MMP_RS04890 -0.8 -0.4 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS05965 -0.8 -1.1 carboxymuconolactone decarboxylase family protein compare
MMP_RS06855 -0.8 -3.4 hypothetical protein compare
MMP_RS02875 -0.8 -2.6 chorismate pyruvate-lyase family protein compare
MMP_RS00315 -0.8 -2.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03535 -0.8 -1.0 helix-turn-helix transcriptional regulator compare
MMP_RS07445 -0.8 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS02805 -0.8 -0.5 HEPN domain-containing protein compare
MMP_RS08860 -0.8 -2.2 MinD/ParA family protein compare
MMP_RS03025 -0.8 -2.1 molybdenum cofactor guanylyltransferase compare
MMP_RS01495 -0.8 -3.8 TraB/GumN family protein compare
MMP_RS05910 -0.8 -0.8 cell division ATPase MinD compare
MMP_RS05955 -0.7 -0.6 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS02225 -0.7 -3.2 carbohydrate kinase family protein compare
MMP_RS06445 -0.7 -1.8 DUF89 domain-containing protein compare
MMP_RS04055 -0.7 -0.6 hypothetical protein compare
MMP_RS03300 -0.7 -0.3 TOBE domain-containing protein compare
MMP_RS01335 -0.7 -0.5 prefoldin subunit beta compare
MMP_RS05415 -0.7 -1.6 DUF22 domain-containing protein compare
MMP_RS06165 -0.7 -3.2 ABC transporter permease compare
MMP_RS02470 -0.7 -0.7 helix-turn-helix transcriptional regulator compare
MMP_RS01750 -0.7 -3.3 DUF63 family protein compare
MMP_RS06340 -0.7 -2.6 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06035 -0.7 -3.0 glycosyltransferase family 2 protein compare
MMP_RS06965 -0.7 -2.2 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS03245 -0.7 -2.2 DNA repair and recombination protein RadB compare
MMP_RS06280 -0.7 -2.4 alpha-glucan family phosphorylase compare
MMP_RS09010 -0.7 -3.2 hypothetical protein compare
MMP_RS04475 -0.7 -2.6 nitrogen fixation compare
MMP_RS00300 -0.7 -0.3 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08690 -0.7 -2.6 RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5 compare
MMP_RS08745 -0.7 -1.9 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07545 -0.7 -0.4 HTH domain-containing protein compare
MMP_RS05770 -0.7 -2.3 YkgJ family cysteine cluster protein compare
MMP_RS06120 -0.7 -0.7 UPF0147 family protein compare
MMP_RS01380 -0.7 -1.8 PHP domain-containing protein compare
MMP_RS00040 -0.7 -2.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00685 -0.7 -1.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS05580 -0.7 -4.3 glycosyltransferase compare
MMP_RS08335 -0.7 -1.9 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS01155 -0.7 -2.2 XRE family transcriptional regulator compare
MMP_RS09055 -0.7 -0.4 CAP domain-containing protein compare
MMP_RS08315 -0.7 -1.3 S-methyl-5-thioribose-1-phosphate isomerase compare
MMP_RS05555 -0.7 -0.5 DUF4040 domain-containing protein compare
MMP_RS01790 -0.7 -1.9 restriction endonuclease compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress sodium iodide across organisms