Experiment set12S337 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete Anhydrotetracycline hydrochloride 0.05 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS04710 -8.0 -1.4 hypothetical protein compare
MMP_RS04720 -7.4 -1.9 DedA family protein compare
MMP_RS06230 -6.2 -1.7 helix-turn-helix domain-containing protein compare
MMP_RS08300 -6.2 -1.1 metal-sulfur cluster assembly factor compare
MMP_RS08720 -6.0 -1.2 4Fe-4S binding protein compare
MMP_RS09020 -5.9 -1.4 hypothetical protein compare
MMP_RS03475 -5.5 -0.6 hypothetical protein compare
MMP_RS08440 -5.4 -2.6 cell division protein SepF compare
MMP_RS01175 -5.3 -3.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06670 -5.2 -5.6 glucose-6-phosphate isomerase compare
MMP_RS02900 -5.1 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS07730 -5.0 -1.6 pyruvate synthase subunit beta compare
MMP_RS02280 -5.0 -0.5 DUF211 domain-containing protein compare
MMP_RS06120 -4.9 -1.6 UPF0147 family protein compare
MMP_RS03960 -4.8 -1.0 hypothetical protein compare
MMP_RS01380 -4.7 -3.8 PHP domain-containing protein compare
MMP_RS07755 -4.7 -1.0 DUF555 domain-containing protein compare
MMP_RS07390 -4.7 -2.4 cell division protein FtsZ compare
MMP_RS08650 -4.6 -2.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS03435 -4.5 -1.8 ketol-acid reductoisomerase compare
MMP_RS04890 -4.3 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01755 -4.2 -1.0 DUF2097 domain-containing protein compare
MMP_RS01890 -4.2 -4.0 nucleotide sugar dehydrogenase compare
MMP_RS07845 -4.1 -2.1 LL-diaminopimelate aminotransferase compare
MMP_RS07545 -4.0 -0.8 HTH domain-containing protein compare
MMP_RS00515 -4.0 -0.8 DUF655 domain-containing protein compare
MMP_RS06630 -3.9 -0.8 UPF0058 family protein compare
MMP_RS00305 -3.8 -1.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS06355 -3.6 -2.0 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS05250 -3.6 -3.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01265 -3.6 -2.7 hypothetical protein compare
MMP_RS07075 -3.6 -3.4 phosphomannomutase/phosphoglucomutase compare
MMP_RS00750 -3.6 -1.9 fumarate hydratase compare
MMP_RS01925 -3.5 -7.4 DUF1616 domain-containing protein compare
MMP_RS06895 -3.5 -1.2 selenocysteine-specific translation elongation factor compare
MMP_RS01880 -3.5 -5.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS02145 -3.5 -8.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS01900 -3.5 -12.3 hypothetical protein compare
MMP_RS01875 -3.4 -7.2 N-acetyltransferase compare
MMP_RS08635 -3.4 -1.6 UbiA family prenyltransferase compare
MMP_RS01955 -3.4 -2.5 hypothetical protein compare
MMP_RS03445 -3.4 -0.8 methanogenesis marker 17 protein compare
MMP_RS01225 -3.4 -3.8 DUF5379 domain-containing protein compare
MMP_RS01905 -3.4 -11.7 glycosyltransferase compare
MMP_RS01885 -3.3 -6.9 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS01325 -3.3 -1.7 dihydroneopterin aldolase family protein compare
MMP_RS03580 -3.3 -3.2 signal recognition particle-docking protein FtsY compare
MMP_RS05845 -3.3 -1.6 tRNA-intron lyase compare
MMP_RS06625 -3.2 -1.4 DNA primase compare
MMP_RS03600 -3.2 -2.1 triose-phosphate isomerase compare
MMP_RS00040 -3.1 -3.9 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06725 -3.1 -9.2 hypothetical protein compare
MMP_RS03640 -3.0 -3.8 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04900 -3.0 -20.1 hypothetical protein compare
MMP_RS08210 -3.0 -1.8 phosphatidylglycerophosphatase A compare
MMP_RS07735 -3.0 -0.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01500 -3.0 -1.9 CBS domain-containing protein compare
MMP_RS07600 -3.0 -1.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07635 -3.0 -6.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS04685 -3.0 -2.5 DUF126 domain-containing protein compare
MMP_RS08820 -3.0 -4.9 hypothetical protein compare
MMP_RS01960 -3.0 -0.9 hypothetical protein compare
MMP_RS01385 -3.0 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01915 -2.9 -10.9 DUF354 domain-containing protein compare
MMP_RS01940 -2.9 -3.5 MoxR family ATPase compare
MMP_RS06315 -2.9 -0.7 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08715 -2.8 -1.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08595 -2.8 -1.0 flagellar protein C compare
MMP_RS02345 -2.8 -3.6 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS05640 -2.7 -4.5 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01800 -2.7 -3.3 TIGR00303 family protein compare
MMP_RS06285 -2.7 -1.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS04775 -2.7 -2.8 adenosylhomocysteinase compare
MMP_RS01910 -2.7 -7.2 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS00915 -2.7 -6.2 DUF116 domain-containing protein compare
MMP_RS03250 -2.7 -3.0 MJ1244 family protein compare
MMP_RS07330 -2.7 -14.9 membrane protein compare
MMP_RS08745 -2.7 -4.8 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS03035 -2.6 -3.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07200 -2.6 -4.6 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07875 -2.5 -4.3 hypothetical protein compare
MMP_RS06400 -2.5 -1.2 4Fe-4S binding protein compare
MMP_RS06350 -2.5 -7.0 HesA/MoeB/ThiF family protein compare
MMP_RS02800 -2.5 -6.8 nucleotidyltransferase domain-containing protein compare
MMP_RS07605 -2.4 -2.6 diadenylate cyclase compare
MMP_RS03700 -2.4 -5.7 sodium:proton antiporter compare
MMP_RS08995 -2.4 -1.1 hypothetical protein compare
MMP_RS02240 -2.4 -2.5 methanogenesis marker 7 protein compare
MMP_RS06295 -2.3 -5.0 methanogenesis marker 14 protein compare
MMP_RS03110 -2.3 -4.4 glycosyltransferase family 2 protein compare
MMP_RS01725 -2.3 -2.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS00115 -2.3 -9.6 radical SAM protein compare
MMP_RS07380 -2.3 -1.7 transcription elongation factor Spt5 compare
MMP_RS07420 -2.3 -3.5 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS00895 -2.3 -3.5 hypothetical protein compare
MMP_RS07005 -2.2 -0.5 4Fe-4S binding protein compare
MMP_RS05635 -2.2 -9.6 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS06980 -2.2 -5.2 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS08435 -2.1 -1.7 Era-like GTP-binding protein compare
MMP_RS01795 -2.1 -1.2 methanogenesis marker 6 protein compare
MMP_RS03315 -2.1 -0.7 ferrous iron transport protein A compare
MMP_RS00325 -2.1 -1.3 RNA-binding protein compare
MMP_RS08790 -2.1 -1.2 translation initiation factor IF-2 subunit alpha compare
MMP_RS01020 -2.1 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00300 -2.1 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01970 -2.1 -8.1 TIGR04279 domain-containing protein compare
MMP_RS02195 -2.1 -2.8 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03025 -2.1 -4.2 molybdenum cofactor guanylyltransferase compare
MMP_RS02235 -2.1 -7.3 CBS domain-containing protein compare
MMP_RS01895 -2.1 -6.5 flippase compare
MMP_RS04780 -2.0 -1.7 ribonuclease P compare
MMP_RS06020 -2.0 -3.1 archaeoflavoprotein AfpA compare
MMP_RS06925 -2.0 -1.7 ribonuclease VapC4 compare
MMP_RS01830 -2.0 -1.0 tRNA-Val compare
MMP_RS01365 -2.0 -2.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00810 -1.9 -5.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07750 -1.9 -4.8 DUF357 domain-containing protein compare
MMP_RS07525 -1.9 -5.5 4Fe-4S binding protein compare
MMP_RS08195 -1.9 -7.7 hypothetical protein compare
MMP_RS07695 -1.9 -3.9 DUF3236 domain-containing protein compare
MMP_RS06885 -1.9 -1.9 50S ribosome-binding GTPase compare
MMP_RS05265 -1.9 -1.5 2-isopropylmalate synthase compare
MMP_RS08890 -1.9 -7.1 glycosyltransferase family 4 protein compare
MMP_RS05540 -1.8 -2.4 hypothetical protein compare
MMP_RS07355 -1.8 -0.7 transcription factor S compare
MMP_RS01610 -1.8 -2.0 hypothetical protein compare
MMP_RS03095 -1.8 -4.3 diphthine synthase compare
MMP_RS01220 -1.8 -4.9 hypothetical protein compare
MMP_RS01650 -1.8 -0.6 sulfurtransferase TusA family protein compare
MMP_RS06395 -1.8 -2.0 ThiF family adenylyltransferase compare
MMP_RS05245 -1.8 -6.8 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07710 -1.8 -4.4 cell division protein FtsZ compare
MMP_RS06600 -1.8 -1.0 class III signal peptide-containing protein compare
MMP_RS00295 -1.7 -1.3 gamma carbonic anhydrase family protein compare
MMP_RS00985 -1.7 -3.0 CDC48 family AAA ATPase compare
MMP_RS06035 -1.7 -6.4 glycosyltransferase family 2 protein compare
MMP_RS01935 -1.7 -6.9 DUF58 domain-containing protein compare
MMP_RS01745 -1.7 -4.1 AMP phosphorylase compare
MMP_RS01665 -1.7 -2.4 DUF2111 domain-containing protein compare
MMP_RS05580 -1.7 -9.6 glycosyltransferase compare
MMP_RS07540 -1.7 -2.6 CBS domain-containing protein compare
MMP_RS05430 -1.7 -3.0 TIGR00288 family NYN domain-containing protein compare
MMP_RS08155 -1.7 -3.8 hypothetical protein compare
MMP_RS02135 -1.7 -3.3 DUF5612 domain-containing protein compare
MMP_RS07445 -1.7 -5.0 helix-turn-helix domain-containing protein compare
MMP_RS00695 -1.6 -0.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05835 -1.6 -0.6 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS07700 -1.6 -5.8 DUF1188 domain-containing protein compare
MMP_RS03400 -1.6 -1.4 archease compare
MMP_RS00520 -1.6 -0.8 RNA polymerase Rpb4 family protein compare
MMP_RS08460 -1.6 -1.5 proteasome-activating nucleotidase compare
MMP_RS06340 -1.6 -4.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01920 -1.6 -5.8 glycosyltransferase family 2 protein compare
MMP_RS04850 -1.5 -9.3 UPF0254 family protein compare
MMP_RS04090 -1.5 -2.0 hypothetical protein compare
MMP_RS06310 -1.5 -2.4 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS04955 -1.5 -4.5 DNA topoisomerase I compare
MMP_RS00685 -1.5 -1.7 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01945 -1.5 -3.9 DUF4350 domain-containing protein compare
MMP_RS02340 -1.5 -1.4 DNA-directed RNA polymerase subunit E'' compare
MMP_RS03205 -1.5 -1.0 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07820 -1.5 -2.0 UPF0104 family protein compare
MMP_RS04615 -1.5 -2.2 PDGLE domain-containing protein compare
MMP_RS03145 -1.5 -4.4 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS07090 -1.4 -4.0 tRNA (adenine-N1)-methyltransferase compare
MMP_RS06475 -1.4 -2.4 FAD-dependent oxidoreductase compare
MMP_RS02190 -1.4 -1.6 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS00315 -1.4 -3.7 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS08590 -1.4 -3.4 flagellin compare
MMP_RS06940 -1.4 -2.0 polyprenyl diphosphate synthase compare
MMP_RS06110 -1.4 -2.2 ATP-dependent protease LonB compare
MMP_RS03125 -1.4 -4.0 cell division ATPase MinD compare
MMP_RS01930 -1.4 -5.1 hypothetical protein compare
MMP_RS01840 -1.4 -3.4 TIGR00289 family protein compare
MMP_RS08645 -1.3 -3.0 UPF0179 family protein compare
MMP_RS01950 -1.3 -3.7 hypothetical protein compare
MMP_RS02595 -1.3 -0.7 putative zinc-binding protein compare
MMP_RS05930 -1.3 -1.0 3-isopropylmalate dehydratase large subunit compare
MMP_RS03390 -1.3 -4.3 malate dehydrogenase compare
MMP_RS07955 -1.3 -3.2 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS01005 -1.3 -0.8 riboflavin synthase compare
MMP_RS01975 -1.3 -5.1 hypothetical protein compare
MMP_RS00720 -1.3 -3.0 metal-dependent hydrolase compare
MMP_RS05425 -1.3 -2.7 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS00735 -1.3 -2.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS03245 -1.3 -2.3 DNA repair and recombination protein RadB compare
MMP_RS08600 -1.2 -1.0 flagellar protein D compare
MMP_RS05345 -1.2 -3.7 hypothetical protein compare
MMP_RS06105 -1.2 -4.3 hydrogenase maturation peptidase HycI compare
MMP_RS06270 -1.2 -2.7 TIGR00300 family protein compare
MMP_RS05295 -1.2 -4.1 minichromosome maintenance protein MCM compare
MMP_RS03015 -1.2 -4.7 GTP 3' 8-cyclase MoaA compare
MMP_RS07580 -1.2 -1.5 DUF356 domain-containing protein compare
MMP_RS05550 -1.2 -0.5 cation:proton antiporter compare
MMP_RS03080 -1.2 -1.7 universal stress protein compare
MMP_RS04690 -1.2 -1.6 class III signal peptide-containing protein compare
MMP_RS05535 -1.2 -2.3 hypothetical protein compare
MMP_RS02355 -1.2 -1.4 30S ribosomal protein S27ae compare
MMP_RS06730 -1.1 -0.9 phosphopantothenate/pantothenate synthetase compare
MMP_RS00675 -1.1 -0.5 nitroreductase family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Anhydrotetracycline hydrochloride across organisms