Experiment set12IT081 for Paraburkholderia graminis OAS925
Chlorogenic acid 5 mM in soil extract
Group: soil extractMedia: Soil Extract + Chlorogenic acid (5 mM) + Dimethyl Sulfoxide (1 vol%)
Culturing: Burkholderia_OAS925_ML2, 24-well transparent microplate; Multitron, Aerobic, at 30 (C), shaken=700 rpm
By: Albina on 15-Mar-22
Specific Phenotypes
For 1 genes in this experiment
For soil extract Chlorogenic acid in Paraburkholderia graminis OAS925
For soil extract Chlorogenic acid across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Aromatic amino acid degradation | 1 |
| Homogentisate pathway of aromatic compound degradation | 1 |
| Plastoquinone Biosynthesis | 1 |
| Tocopherol Biosynthesis | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| plastoquinol-9 biosynthesis I | 3 | 1 | 1 |
| L-tyrosine degradation I | 5 | 5 | 1 |
| superpathway of plastoquinol biosynthesis | 5 | 2 | 1 |
| vitamin E biosynthesis (tocopherols) | 7 | 1 | 1 |
| L-phenylalanine degradation IV (mammalian, via side chain) | 9 | 3 | 1 |