Experiment set12IT076 for Ralstonia sp. UNC404CL21Col

Compare to:

Ra3_0.01

200 most important genes:

  gene name fitness t score description  
ABZR87_RS15250 -4.5 -13.1 PP2C family serine/threonine-protein phosphatase compare
ABZR87_RS07020 -4.0 -14.6 dynamin-like GTPase family protein compare
ABZR87_RS00285 -3.6 -2.4 acetylornithine transaminase compare
ABZR87_RS16180 -2.9 -5.1 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS07510 -2.8 -5.6 LysR family transcriptional regulator compare
ABZR87_RS05170 -2.7 -5.3 acetylglutamate kinase compare
ABZR87_RS00385 -2.7 -2.8 response regulator transcription factor compare
ABZR87_RS10240 -2.7 -3.1 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS01780 -2.6 -1.5 MarC family protein compare
ABZR87_RS10120 -2.5 -1.8 YceD family protein compare
ABZR87_RS13175 -2.5 -2.5 tRNA-Leu compare
ABZR87_RS00835 -2.4 -7.5 argininosuccinate synthase compare
ABZR87_RS02485 -2.3 -1.4 MarC family protein compare
ABZR87_RS06030 -2.3 -1.4 AraC family transcriptional regulator compare
ABZR87_RS16170 -2.1 -5.9 argininosuccinate lyase compare
ABZR87_RS00390 -2.1 -10.1 hybrid sensor histidine kinase/response regulator compare
ABZR87_RS07050 -2.0 -1.9 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS10525 -1.9 -2.6 L-threonylcarbamoyladenylate synthase compare
ABZR87_RS09635 -1.9 -2.2 ribosome small subunit-dependent GTPase A compare
ABZR87_RS07700 -1.9 -2.2 peptidylprolyl isomerase compare
ABZR87_RS09935 -1.9 -4.3 amino acid aminotransferase compare
ABZR87_RS22300 -1.9 -1.6 flagellar biosynthesis anti-sigma factor FlgM compare
ABZR87_RS14330 -1.8 -1.3 hypothetical protein compare
ABZR87_RS12795 -1.7 -5.8 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS08795 -1.6 -4.2 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS07635 -1.5 -2.2 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS04940 -1.5 -4.8 PAS domain-containing sensor histidine kinase compare
ABZR87_RS14955 -1.4 -5.6 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS08660 -1.4 -5.5 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS10170 -1.4 -3.9 RseA family anti-sigma factor compare
ABZR87_RS01615 -1.4 -3.3 RNB domain-containing ribonuclease compare
ABZR87_RS08580 -1.4 -2.9 response regulator compare
ABZR87_RS18190 -1.4 -2.2 Ivy family c-type lysozyme inhibitor compare
ABZR87_RS01980 -1.4 -2.7 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS10780 -1.4 -3.4 PD-(D/E)XK nuclease family protein compare
ABZR87_RS07705 -1.3 -3.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS16720 -1.3 -1.5 collagen-like triple helix repeat-containing protein compare
ABZR87_RS14375 -1.3 -3.2 fumarate hydratase compare
ABZR87_RS14115 -1.3 -5.7 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS08655 -1.3 -2.6 glucose-1-phosphate thymidylyltransferase RfbA compare
ABZR87_RS16165 -1.3 -0.9 anti-sigma factor compare
ABZR87_RS12790 -1.3 -3.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS20785 -1.3 -1.5 DUF2783 domain-containing protein compare
ABZR87_RS20730 -1.3 -1.4 hypothetical protein compare
ABZR87_RS05100 -1.3 -6.1 RNA polymerase-binding protein DksA compare
ABZR87_RS10565 -1.2 -3.6 cupin domain-containing protein compare
ABZR87_RS15705 -1.2 -3.1 UvrD-helicase domain-containing protein compare
ABZR87_RS02555 -1.2 -5.6 ABC transporter ATP-binding protein compare
ABZR87_RS01285 -1.2 -2.1 preprotein translocase subunit YajC compare
ABZR87_RS15275 -1.2 -1.3 hypothetical protein compare
ABZR87_RS02550 -1.2 -4.0 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR87_RS05590 -1.2 -1.7 orotate phosphoribosyltransferase compare
ABZR87_RS04265 -1.1 -5.8 phenylalanine 4-monooxygenase compare
ABZR87_RS12785 -1.1 -3.3 endopeptidase La compare
ABZR87_RS11125 -1.1 -4.6 cell division protein ZapE compare
ABZR87_RS00360 -1.1 -1.7 acyl-CoA desaturase compare
ABZR87_RS05350 -1.1 -4.1 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS12385 -1.1 -1.6 AraC family transcriptional regulator compare
ABZR87_RS04975 -1.1 -3.4 peptide deformylase compare
ABZR87_RS13350 -1.1 -3.2 potassium transporter Kup compare
ABZR87_RS13475 -1.0 -4.7 PAS domain S-box protein compare
ABZR87_RS06645 -1.0 -2.5 TlpA disulfide reductase family protein compare
ABZR87_RS00325 -1.0 -2.1 peptidylprolyl isomerase compare
ABZR87_RS10785 -1.0 -3.3 exodeoxyribonuclease V subunit beta compare
ABZR87_RS02850 -1.0 -3.2 elongation factor Tu compare
ABZR87_RS00970 -1.0 -1.4 molecular chaperone DnaJ compare
ABZR87_RS16250 -1.0 -2.8 iron-sulfur cluster carrier protein ApbC compare
ABZR87_RS05570 -1.0 -5.3 lysophospholipid acyltransferase family protein compare
ABZR87_RS17595 -1.0 -1.9 hypothetical protein compare
ABZR87_RS02535 -1.0 -4.3 phospholipid-binding protein MlaC compare
ABZR87_RS01675 -1.0 -1.3 carbohydrate kinase family protein compare
ABZR87_RS03780 -1.0 -1.6 thiosulfate oxidation carrier protein SoxY compare
ABZR87_RS10930 -0.9 -1.7 outer membrane protein assembly factor BamB compare
ABZR87_RS11420 -0.9 -1.9 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
ABZR87_RS19010 -0.9 -2.2 acyloxyacyl hydrolase compare
ABZR87_RS05145 -0.9 -1.5 copper chaperone PCu(A)C compare
ABZR87_RS17440 -0.9 -1.2 (2Fe-2S)-binding protein compare
ABZR87_RS02540 -0.9 -4.8 VacJ family lipoprotein compare
ABZR87_RS11650 -0.9 -3.5 ribosomal protein S18-alanine N-acetyltransferase compare
ABZR87_RS11495 -0.9 -2.2 NADPH-dependent FMN reductase compare
ABZR87_RS13300 -0.9 -5.1 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS02445 -0.9 -2.6 Sec-independent protein translocase protein TatB compare
ABZR87_RS04125 -0.9 -4.4 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS05130 -0.9 -1.1 CsbD family protein compare
ABZR87_RS01430 -0.9 -6.6 LysR family transcriptional regulator compare
ABZR87_RS07620 -0.9 -2.4 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS13705 -0.9 -1.0 integration host factor subunit alpha compare
ABZR87_RS08645 -0.9 -0.8 dTDP-glucose 4,6-dehydratase compare
ABZR87_RS19305 -0.8 -1.8 SctK family type III secretion system sorting platform protein compare
ABZR87_RS02100 -0.8 -3.4 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase PaaG compare
ABZR87_RS05645 -0.8 -2.9 SDR family oxidoreductase compare
ABZR87_RS11675 -0.8 -1.9 disulfide bond formation protein B compare
ABZR87_RS00795 -0.8 -2.6 site-specific tyrosine recombinase XerD compare
ABZR87_RS09615 -0.8 -1.3 50S ribosomal protein L19 compare
ABZR87_RS14910 -0.8 -3.2 polyribonucleotide nucleotidyltransferase compare
ABZR87_RS06395 -0.8 -3.1 response regulator compare
ABZR87_RS05065 -0.8 -2.9 tyrosine recombinase XerC compare
ABZR87_RS17335 -0.8 -3.3 pyroglutamyl-peptidase I compare
ABZR87_RS08040 -0.8 -3.9 lipopolysaccharide heptosyltransferase II compare
ABZR87_RS01555 -0.8 -1.2 barstar family protein compare
ABZR87_RS19175 -0.8 -2.6 AraC family transcriptional regulator compare
ABZR87_RS02440 -0.8 -5.2 twin-arginine translocase subunit TatC compare
ABZR87_RS09700 -0.8 -1.7 DEAD/DEAH box helicase compare
ABZR87_RS16270 -0.8 -1.9 cold-shock protein compare
ABZR87_RS22260 -0.8 -1.5 flagellar basal body L-ring protein FlgH compare
ABZR87_RS13290 -0.8 -2.2 3-ketoacyl-ACP reductase compare
ABZR87_RS09875 -0.8 -2.5 GNAT family protein compare
ABZR87_RS23295 -0.8 -1.0 hypothetical protein compare
ABZR87_RS08695 -0.8 -4.4 capsular polysaccharide biosynthesis protein CapF compare
ABZR87_RS10610 -0.7 -1.4 inositol monophosphatase family protein compare
ABZR87_RS23290 -0.7 -2.1 2-hydroxychromene-2-carboxylate isomerase compare
ABZR87_RS01145 -0.7 -1.8 glycolate oxidase subunit GlcE compare
ABZR87_RS02220 -0.7 -5.3 redox-regulated ATPase YchF compare
ABZR87_RS08620 -0.7 -2.3 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR compare
ABZR87_RS00830 -0.7 -2.1 pyrimidine/purine nucleoside phosphorylase compare
ABZR87_RS19050 -0.7 -2.7 glycosyltransferase family 39 protein compare
ABZR87_RS06300 -0.7 -2.4 SDR family oxidoreductase compare
ABZR87_RS22190 -0.7 -2.5 flagellar basal body-associated protein FliL compare
ABZR87_RS06850 -0.7 -4.8 SCO family protein compare
ABZR87_RS14950 -0.7 -1.7 acetolactate synthase small subunit compare
ABZR87_RS11135 -0.7 -5.0 heavy metal translocating P-type ATPase compare
ABZR87_RS00875 -0.7 -2.3 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS11940 -0.7 -1.6 SsrA-binding protein SmpB compare
ABZR87_RS18040 -0.7 -4.3 RNA polymerase sigma factor FliA compare
ABZR87_RS17100 -0.7 -3.0 cupredoxin family protein compare
ABZR87_RS05060 -0.7 -2.8 DUF484 family protein compare
ABZR87_RS19320 -0.7 -0.9 hypothetical protein compare
ABZR87_RS21110 -0.7 -1.7 GntR family transcriptional regulator compare
ABZR87_RS15500 -0.7 -3.0 glycosyltransferase compare
ABZR87_RS22265 -0.7 -3.6 flagellar basal-body rod protein FlgG compare
ABZR87_RS04565 -0.7 -1.8 PaaI family thioesterase compare
ABZR87_RS22075 -0.7 -3.2 flagellar motor switch protein FliG compare
ABZR87_RS14085 -0.7 -3.9 phosphate ABC transporter ATP-binding protein PstB compare
ABZR87_RS18030 -0.7 -4.2 flagellar biosynthesis protein FlhF compare
ABZR87_RS23175 -0.7 -1.8 ABC transporter ATP-binding protein compare
ABZR87_RS12345 -0.7 -0.8 dethiobiotin synthase compare
ABZR87_RS20955 -0.7 -1.2 MarR family transcriptional regulator compare
ABZR87_RS16620 -0.7 -1.8 hypothetical protein compare
ABZR87_RS17115 -0.7 -2.0 phytanoyl-CoA dioxygenase family protein compare
ABZR87_RS21550 -0.6 -2.0 glyoxylate/hydroxypyruvate reductase A compare
ABZR87_RS10175 -0.6 -2.7 MucB/RseB C-terminal domain-containing protein compare
ABZR87_RS03075 -0.6 -3.6 AGE family epimerase/isomerase compare
ABZR87_RS13645 -0.6 -0.5 hypothetical protein compare
ABZR87_RS00005 -0.6 -1.2 hypothetical protein compare
ABZR87_RS06295 -0.6 -1.6 acyl-CoA dehydrogenase family protein compare
ABZR87_RS16125 -0.6 -2.8 heme biosynthesis protein HemY compare
ABZR87_RS21095 -0.6 -0.6 TRAP transporter small permease compare
ABZR87_RS00340 -0.6 -1.9 50S ribosomal protein L33 compare
ABZR87_RS22255 -0.6 -2.7 flagellar basal body P-ring protein FlgI compare
ABZR87_RS17850 -0.6 -2.2 2-hydroxychromene-2-carboxylate isomerase compare
ABZR87_RS21445 -0.6 -2.5 LysR family transcriptional regulator compare
ABZR87_RS02545 -0.6 -3.5 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR87_RS11245 -0.6 -2.9 translational GTPase TypA compare
ABZR87_RS22290 -0.6 -2.4 flagellar basal body rod protein FlgB compare
ABZR87_RS09710 -0.6 -1.9 tRNA-Arg compare
ABZR87_RS22205 -0.6 -2.3 flagellar biosynthetic protein FliO compare
ABZR87_RS02385 -0.6 -2.3 ubiquinol-cytochrome c reductase iron-sulfur subunit compare
ABZR87_RS07330 -0.6 -2.0 hypothetical protein compare
ABZR87_RS08590 -0.6 -2.5 methyl-accepting chemotaxis protein compare
ABZR87_RS06715 -0.6 -2.0 PTS sugar transporter subunit IIA compare
ABZR87_RS00435 -0.6 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpA compare
ABZR87_RS22210 -0.6 -3.3 flagellar type III secretion system pore protein FliP compare
ABZR87_RS18025 -0.6 -3.2 flagellar biosynthesis protein FlhA compare
ABZR87_RS22340 -0.6 -1.2 hypothetical protein compare
ABZR87_RS04995 -0.6 -1.1 DNA topoisomerase III compare
ABZR87_RS16185 -0.6 -0.7 dCTP deaminase compare
ABZR87_RS22295 -0.6 -4.9 flagellar basal body P-ring formation chaperone FlgA compare
ABZR87_RS20140 -0.6 -1.2 PAAR domain-containing protein compare
ABZR87_RS11185 -0.6 -4.3 sulfite exporter TauE/SafE family protein compare
ABZR87_RS01580 -0.6 -1.9 CinA family protein compare
ABZR87_RS15485 -0.6 -2.1 glycosyltransferase family 2 protein compare
ABZR87_RS22080 -0.6 -4.2 flagellar basal-body MS-ring/collar protein FliF compare
ABZR87_RS14890 -0.6 -0.6 preprotein translocase subunit SecG compare
ABZR87_RS10195 -0.6 -1.3 signal peptidase I compare
ABZR87_RS11165 -0.6 -3.5 cytochrome c oxidase accessory protein CcoG compare
ABZR87_RS18015 -0.6 -3.7 flagellar biosynthesis protein FlhB compare
ABZR87_RS04120 -0.6 -2.2 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG compare
ABZR87_RS01685 -0.6 -2.1 histone H1-like DNA-binding protein compare
ABZR87_RS14510 -0.6 -1.9 tRNA pseudouridine(38-40) synthase TruA compare
ABZR87_RS15510 -0.6 -3.6 sulfurtransferase compare
ABZR87_RS11015 -0.6 -2.3 amino-acid N-acetyltransferase compare
ABZR87_RS03915 -0.6 -4.3 UvrD-helicase domain-containing protein compare
ABZR87_RS22280 -0.6 -2.3 flagellar hook assembly protein FlgD compare
ABZR87_RS17395 -0.6 -0.8 GNAT family protein compare
ABZR87_RS11140 -0.5 -1.5 cbb3-type cytochrome oxidase assembly protein CcoS compare
ABZR87_RS22195 -0.5 -3.8 flagellar motor switch protein FliM compare
ABZR87_RS14680 -0.5 -0.9 SDR family oxidoreductase compare
ABZR87_RS15405 -0.5 -1.8 YebC/PmpR family DNA-binding transcriptional regulator compare
ABZR87_RS06495 -0.5 -1.0 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS14575 -0.5 -2.1 GntR family transcriptional regulator compare
ABZR87_RS09625 -0.5 -3.8 CobD/CbiB family protein compare
ABZR87_RS16060 -0.5 -2.6 DNA translocase FtsK compare
ABZR87_RS11525 -0.5 -1.2 molybdopterin-binding protein compare
ABZR87_RS07730 -0.5 -0.9 lysophospholipid acyltransferase family protein compare
ABZR87_RS18630 -0.5 -1.5 class II fumarate hydratase compare
ABZR87_RS21700 -0.5 -1.0 hypothetical protein compare
ABZR87_RS09505 -0.5 -2.3 ADP-glyceromanno-heptose 6-epimerase compare
ABZR87_RS21925 -0.5 -0.9 hypothetical protein compare
ABZR87_RS09220 -0.5 -1.8 FKBP-type peptidyl-prolyl cis-trans isomerase compare
ABZR87_RS04295 -0.5 -2.3 HU family DNA-binding protein compare


Specific Phenotypes

None in this experiment

For Ralstonia sp. UNC404CL21Col in phage experiments

For phage Kanamycin across organisms