Experiment set12IT075 for Ralstonia sp. UNC404CL21Col

Compare to:

Ra3_0.1

200 most important genes:

  gene name fitness t score description  
ABZR87_RS15250 -6.6 -9.0 PP2C family serine/threonine-protein phosphatase compare
ABZR87_RS07020 -6.4 -15.5 dynamin-like GTPase family protein compare
ABZR87_RS00390 -3.9 -15.2 hybrid sensor histidine kinase/response regulator compare
ABZR87_RS00385 -3.6 -1.9 response regulator transcription factor compare
ABZR87_RS00285 -3.4 -2.4 acetylornithine transaminase compare
ABZR87_RS12345 -3.0 -1.9 dethiobiotin synthase compare
ABZR87_RS22300 -3.0 -1.9 flagellar biosynthesis anti-sigma factor FlgM compare
ABZR87_RS08040 -2.7 -6.9 lipopolysaccharide heptosyltransferase II compare
ABZR87_RS08580 -2.7 -3.9 response regulator compare
ABZR87_RS07050 -2.6 -1.8 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS13175 -2.6 -3.0 tRNA-Leu compare
ABZR87_RS01685 -2.6 -6.3 histone H1-like DNA-binding protein compare
ABZR87_RS16180 -2.6 -5.1 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS22265 -2.6 -6.1 flagellar basal-body rod protein FlgG compare
ABZR87_RS05170 -2.4 -4.4 acetylglutamate kinase compare
ABZR87_RS16720 -2.3 -3.4 collagen-like triple helix repeat-containing protein compare
ABZR87_RS10240 -2.3 -3.0 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS05100 -2.3 -5.0 RNA polymerase-binding protein DksA compare
ABZR87_RS16170 -2.2 -5.7 argininosuccinate lyase compare
ABZR87_RS02535 -2.1 -7.5 phospholipid-binding protein MlaC compare
ABZR87_RS07700 -2.1 -2.0 peptidylprolyl isomerase compare
ABZR87_RS11420 -2.0 -3.0 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
ABZR87_RS00325 -2.0 -3.1 peptidylprolyl isomerase compare
ABZR87_RS02545 -2.0 -8.1 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR87_RS09500 -2.0 -3.7 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
ABZR87_RS02540 -2.0 -8.5 VacJ family lipoprotein compare
ABZR87_RS15485 -2.0 -4.5 glycosyltransferase family 2 protein compare
ABZR87_RS10610 -1.9 -2.1 inositol monophosphatase family protein compare
ABZR87_RS09935 -1.9 -3.9 amino acid aminotransferase compare
ABZR87_RS08795 -1.9 -5.1 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS08750 -1.9 -5.3 lipopolysaccharide heptosyltransferase I compare
ABZR87_RS07510 -1.9 -6.0 LysR family transcriptional regulator compare
ABZR87_RS02445 -1.9 -5.3 Sec-independent protein translocase protein TatB compare
ABZR87_RS02550 -1.9 -5.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR87_RS15705 -1.8 -3.4 UvrD-helicase domain-containing protein compare
ABZR87_RS15500 -1.8 -6.3 glycosyltransferase compare
ABZR87_RS03075 -1.8 -8.1 AGE family epimerase/isomerase compare
ABZR87_RS11790 -1.8 -3.9 cell division protein ZipA C-terminal FtsZ-binding domain-containing protein compare
ABZR87_RS20730 -1.7 -1.6 hypothetical protein compare
ABZR87_RS12790 -1.7 -4.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS11125 -1.7 -5.6 cell division protein ZapE compare
ABZR87_RS18030 -1.7 -9.4 flagellar biosynthesis protein FlhF compare
ABZR87_RS22255 -1.7 -4.8 flagellar basal body P-ring protein FlgI compare
ABZR87_RS00835 -1.7 -6.4 argininosuccinate synthase compare
ABZR87_RS02555 -1.7 -7.7 ABC transporter ATP-binding protein compare
ABZR87_RS11170 -1.7 -1.4 FixH family protein compare
ABZR87_RS11525 -1.7 -2.2 molybdopterin-binding protein compare
ABZR87_RS02440 -1.6 -9.1 twin-arginine translocase subunit TatC compare
ABZR87_RS13350 -1.6 -3.9 potassium transporter Kup compare
ABZR87_RS15495 -1.6 -9.4 O-antigen ligase family protein compare
ABZR87_RS22210 -1.6 -7.4 flagellar type III secretion system pore protein FliP compare
ABZR87_RS05645 -1.6 -4.1 SDR family oxidoreductase compare
ABZR87_RS09505 -1.5 -4.3 ADP-glyceromanno-heptose 6-epimerase compare
ABZR87_RS18040 -1.5 -7.2 RNA polymerase sigma factor FliA compare
ABZR87_RS21815 -1.5 -1.3 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS00875 -1.5 -5.2 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS22280 -1.5 -5.1 flagellar hook assembly protein FlgD compare
ABZR87_RS15440 -1.5 -3.3 ribonuclease G compare
ABZR87_RS11860 -1.5 -7.0 RIP metalloprotease RseP compare
ABZR87_RS15480 -1.5 -8.4 glycosyltransferase family 25 protein compare
ABZR87_RS18025 -1.5 -8.4 flagellar biosynthesis protein FlhA compare
ABZR87_RS22205 -1.5 -3.7 flagellar biosynthetic protein FliO compare
ABZR87_RS22290 -1.5 -5.0 flagellar basal body rod protein FlgB compare
ABZR87_RS08625 -1.4 -1.4 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS04295 -1.4 -5.4 HU family DNA-binding protein compare
ABZR87_RS22195 -1.4 -8.6 flagellar motor switch protein FliM compare
ABZR87_RS07620 -1.4 -3.6 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS10565 -1.4 -4.2 cupin domain-containing protein compare
ABZR87_RS18000 -1.4 -2.6 protein phosphatase CheZ compare
ABZR87_RS04265 -1.4 -7.2 phenylalanine 4-monooxygenase compare
ABZR87_RS08235 -1.4 -1.6 hypothetical protein compare
ABZR87_RS13475 -1.4 -5.7 PAS domain S-box protein compare
ABZR87_RS10165 -1.4 -9.6 RNA polymerase sigma factor RpoE compare
ABZR87_RS08685 -1.4 -11.0 hypothetical protein compare
ABZR87_RS15490 -1.4 -7.4 glycosyltransferase family 2 protein compare
ABZR87_RS22260 -1.4 -3.0 flagellar basal body L-ring protein FlgH compare
ABZR87_RS01615 -1.4 -3.0 RNB domain-containing ribonuclease compare
ABZR87_RS22295 -1.3 -9.4 flagellar basal body P-ring formation chaperone FlgA compare
ABZR87_RS00360 -1.3 -1.7 acyl-CoA desaturase compare
ABZR87_RS22275 -1.3 -8.2 flagellar hook protein FlgE compare
ABZR87_RS18015 -1.3 -7.8 flagellar biosynthesis protein FlhB compare
ABZR87_RS02640 -1.3 -10.4 diaminopimelate decarboxylase compare
ABZR87_RS11940 -1.3 -2.4 SsrA-binding protein SmpB compare
ABZR87_RS16060 -1.3 -6.5 DNA translocase FtsK compare
ABZR87_RS22245 -1.3 -9.2 flagellar hook-associated protein FlgK compare
ABZR87_RS05350 -1.2 -4.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS22080 -1.2 -8.1 flagellar basal-body MS-ring/collar protein FliF compare
ABZR87_RS01675 -1.2 -1.4 carbohydrate kinase family protein compare
ABZR87_RS10780 -1.2 -3.1 PD-(D/E)XK nuclease family protein compare
ABZR87_RS10980 -1.2 -1.1 tRNA-Leu compare
ABZR87_RS00795 -1.2 -3.4 site-specific tyrosine recombinase XerD compare
ABZR87_RS14955 -1.2 -4.8 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS12785 -1.2 -3.6 endopeptidase La compare
ABZR87_RS22075 -1.2 -5.3 flagellar motor switch protein FliG compare
ABZR87_RS22285 -1.2 -2.8 flagellar basal body rod protein FlgC compare
ABZR87_RS22220 -1.2 -5.6 flagellar biosynthetic protein FliR compare
ABZR87_RS05065 -1.2 -3.5 tyrosine recombinase XerC compare
ABZR87_RS22250 -1.2 -5.6 flagellar assembly peptidoglycan hydrolase FlgJ compare
ABZR87_RS09635 -1.2 -1.6 ribosome small subunit-dependent GTPase A compare
ABZR87_RS07730 -1.2 -1.8 lysophospholipid acyltransferase family protein compare
ABZR87_RS10550 -1.2 -1.2 outer membrane protein assembly factor BamC compare
ABZR87_RS10120 -1.2 -1.3 YceD family protein compare
ABZR87_RS22190 -1.2 -3.8 flagellar basal body-associated protein FliL compare
ABZR87_RS22240 -1.1 -6.7 flagellar hook-associated protein FlgL compare
ABZR87_RS22270 -1.1 -5.4 flagellar basal-body rod protein FlgF compare
ABZR87_RS01980 -1.1 -1.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS20250 -1.1 -2.1 type VI secretion system lipoprotein TssJ compare
ABZR87_RS07005 -1.1 -1.4 lipoprotein insertase outer membrane protein LolB compare
ABZR87_RS08740 -1.1 -8.2 hypothetical protein compare
ABZR87_RS15010 -1.1 -2.0 DUF924 family protein compare
ABZR87_RS01700 -1.1 -2.0 DUF2147 domain-containing protein compare
ABZR87_RS15305 -1.1 -3.0 pyroglutamyl-peptidase I compare
ABZR87_RS12795 -1.1 -4.2 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS07705 -1.1 -2.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS11245 -1.1 -4.3 translational GTPase TypA compare
ABZR87_RS16125 -1.1 -3.9 heme biosynthesis protein HemY compare
ABZR87_RS22065 -1.1 -5.1 flagellar protein export ATPase FliI compare
ABZR87_RS10395 -1.1 -4.0 single-stranded-DNA-specific exonuclease RecJ compare
ABZR87_RS08660 -1.1 -3.6 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS01420 -1.1 -1.7 outer membrane protein assembly factor BamE compare
ABZR87_RS13290 -1.1 -4.2 3-ketoacyl-ACP reductase compare
ABZR87_RS00100 -1.1 -2.0 hypothetical protein compare
ABZR87_RS10785 -1.0 -3.2 exodeoxyribonuclease V subunit beta compare
ABZR87_RS22055 -1.0 -2.8 flagellar hook-length control protein FliK compare
ABZR87_RS14115 -1.0 -5.4 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS02630 -1.0 -3.1 iron donor protein CyaY compare
ABZR87_RS05145 -1.0 -1.6 copper chaperone PCu(A)C compare
ABZR87_RS22305 -1.0 -3.8 flagella synthesis protein FlgN compare
ABZR87_RS04270 -1.0 -3.6 4a-hydroxytetrahydrobiopterin dehydratase compare
ABZR87_RS08635 -1.0 -5.0 lysophospholipid acyltransferase family protein compare
ABZR87_RS10930 -1.0 -1.6 outer membrane protein assembly factor BamB compare
ABZR87_RS03420 -1.0 -1.0 type II secretion system minor pseudopilin GspI compare
ABZR87_RS22060 -1.0 -2.0 flagellar export protein FliJ compare
ABZR87_RS14965 -1.0 -2.6 DUF3619 family protein compare
ABZR87_RS08045 -0.9 -2.5 zinc-finger domain-containing protein compare
ABZR87_RS16055 -0.9 -4.7 outer membrane lipoprotein chaperone LolA compare
ABZR87_RS09440 -0.9 -3.1 DUF2059 domain-containing protein compare
ABZR87_RS19305 -0.9 -2.4 SctK family type III secretion system sorting platform protein compare
ABZR87_RS06495 -0.9 -1.3 D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase compare
ABZR87_RS14375 -0.9 -2.0 fumarate hydratase compare
ABZR87_RS20945 -0.9 -1.8 DNA-3-methyladenine glycosylase I compare
ABZR87_RS06645 -0.9 -2.1 TlpA disulfide reductase family protein compare
ABZR87_RS10070 -0.9 -1.4 gephyrin-like molybdotransferase Glp compare
ABZR87_RS18035 -0.9 -1.9 flagellar synthesis regulator FleN compare
ABZR87_RS01780 -0.9 -0.9 MarC family protein compare
ABZR87_RS17945 -0.9 -5.7 flagellar motor stator protein MotA compare
ABZR87_RS01885 -0.8 -2.1 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
ABZR87_RS09710 -0.8 -2.6 tRNA-Arg compare
ABZR87_RS11990 -0.8 -2.2 hypothetical protein compare
ABZR87_RS10870 -0.8 -4.2 peptidoglycan DD-metalloendopeptidase family protein compare
ABZR87_RS11375 -0.8 -5.1 inorganic phosphate transporter compare
ABZR87_RS17990 -0.8 -3.1 chemotaxis response regulator protein-glutamate methylesterase compare
ABZR87_RS08645 -0.8 -0.8 dTDP-glucose 4,6-dehydratase compare
ABZR87_RS05570 -0.8 -3.4 lysophospholipid acyltransferase family protein compare
ABZR87_RS03915 -0.8 -5.8 UvrD-helicase domain-containing protein compare
ABZR87_RS13240 -0.8 -6.2 transcription-repair coupling factor compare
ABZR87_RS12480 -0.8 -3.2 endolytic transglycosylase MltG compare
ABZR87_RS05590 -0.8 -1.4 orotate phosphoribosyltransferase compare
ABZR87_RS12965 -0.8 -1.9 tail protein X compare
ABZR87_RS10800 -0.8 -1.7 YbaB/EbfC family nucleoid-associated protein compare
ABZR87_RS13120 -0.8 -3.6 helix-turn-helix transcriptional regulator compare
ABZR87_RS22485 -0.8 -3.9 FAD-dependent oxidoreductase compare
ABZR87_RS13300 -0.8 -4.3 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS17270 -0.8 -1.4 hypothetical protein compare
ABZR87_RS16185 -0.8 -1.3 dCTP deaminase compare
ABZR87_RS17995 -0.8 -1.5 chemotaxis response regulator CheY compare
ABZR87_RS07635 -0.7 -1.4 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS09700 -0.7 -2.7 DEAD/DEAH box helicase compare
ABZR87_RS01055 -0.7 -4.1 heat-inducible transcriptional repressor HrcA compare
ABZR87_RS04240 -0.7 -1.9 heavy-metal-associated domain-containing protein compare
ABZR87_RS13130 -0.7 -2.7 ogr/Delta-like zinc finger family protein compare
ABZR87_RS21585 -0.7 -1.7 multidrug efflux SMR transporter compare
ABZR87_RS14160 -0.7 -5.8 transglycosylase SLT domain-containing protein compare
ABZR87_RS16225 -0.7 -1.8 twin-arginine translocation signal domain-containing protein compare
ABZR87_RS05130 -0.7 -0.9 CsbD family protein compare
ABZR87_RS21285 -0.7 -1.9 TetR/AcrR family transcriptional regulator compare
ABZR87_RS09625 -0.7 -4.1 CobD/CbiB family protein compare
ABZR87_RS01005 -0.7 -1.9 RNA-binding S4 domain-containing protein compare
ABZR87_RS19050 -0.7 -2.5 glycosyltransferase family 39 protein compare
ABZR87_RS07710 -0.7 -2.4 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
ABZR87_RS07975 -0.7 -2.2 DUF2889 domain-containing protein compare
ABZR87_RS11760 -0.7 -0.8 membrane protein compare
ABZR87_RS12945 -0.7 -2.7 GPO family capsid scaffolding protein compare
ABZR87_RS11370 -0.7 -2.5 DUF47 domain-containing protein compare
ABZR87_RS01255 -0.7 -4.2 LysR substrate-binding domain-containing protein compare
ABZR87_RS16960 -0.7 -2.3 HAMP domain-containing sensor histidine kinase compare
ABZR87_RS22175 -0.7 -3.8 flagellin compare
ABZR87_RS10650 -0.7 -3.4 DNA-3-methyladenine glycosylase compare
ABZR87_RS00765 -0.7 -3.9 N-acetylmuramoyl-L-alanine amidase compare
ABZR87_RS11460 -0.6 -2.3 gephyrin-like molybdotransferase Glp compare
ABZR87_RS01430 -0.6 -4.8 LysR family transcriptional regulator compare
ABZR87_RS06825 -0.6 -1.0 twin transmembrane helix small protein compare
ABZR87_RS16400 -0.6 -1.5 LysR family transcriptional regulator compare
ABZR87_RS08200 -0.6 -4.6 HD-GYP domain-containing protein compare
ABZR87_RS11325 -0.6 -2.1 hypothetical protein compare
ABZR87_RS09560 -0.6 -4.3 D-amino acid dehydrogenase compare
ABZR87_RS01555 -0.6 -0.6 barstar family protein compare
ABZR87_RS09945 -0.6 -3.5 recombinase compare
ABZR87_RS02220 -0.6 -4.1 redox-regulated ATPase YchF compare
ABZR87_RS11185 -0.6 -4.4 sulfite exporter TauE/SafE family protein compare


Specific Phenotypes

For 5 genes in this experiment

For phage Kanamycin in Ralstonia sp. UNC404CL21Col

For phage Kanamycin across organisms