Experiment set12IT074 for Desulfovibrio vulgaris Hildenborough JW710

Compare to:

MoYLS4 with Polyethylene glycol 5%

200 most detrimental genes:

  gene name fitness t score description  
DVU2867 +1.4 2.4 holin (TIGR) compare
DVU1033 cinA +1.3 1.1 competence/damage-inducible protein CinA protein, truncation (TIGR) compare
DVU1844 +1.2 0.8 septum formation initiator family protein (TIGR) compare
DVU2957 +1.0 0.5 hypothetical protein (TIGR) compare
DVUA0089 +1.0 0.7 hypothetical protein (TIGR) compare
DVU2075 parA +1.0 1.9 ParA family protein (TIGR) compare
DVU0024 +1.0 1.1 conserved hypothetical protein (TIGR) compare
DVU3364 +1.0 3.1 conserved hypothetical protein (TIGR) compare
DVU0787 +1.0 2.3 hypothetical protein (TIGR) compare
DVU2649 +0.9 2.8 hypothetical protein (TIGR) compare
DORF47110 +0.9 1.8 no description compare
DVU1061 +0.8 1.0 glycosyl transferase, group 1 family protein (TIGR) compare
DVU0620 +0.8 1.2 endoribonuclease, L-PSP family (TIGR) compare
DVU0318 +0.8 3.0 TPR domain protein (TIGR) compare
DORF9585 +0.8 0.9 no description compare
DORF26446 +0.8 1.0 no description compare
DVU0043 fliQ +0.8 3.2 flagellar biosynthetic protein FliQ (TIGR) compare
DVUA0071 +0.8 1.3 glycosyl transferase, group 1/2 family protein (TIGR) compare
DVU2203 +0.7 1.8 endoribonuclease, L-PSP family (TIGR) compare
DVU2863 +0.7 0.8 hypothetical protein (TIGR) compare
DVU2498 +0.7 2.2 hypothetical protein (TIGR) compare
DVU0590 +0.7 1.8 hypothetical protein (TIGR) compare
DVU1251 +0.7 2.8 hypothetical protein (TIGR) compare
DVU1632 +0.7 3.2 PTS system, IIA component (TIGR) compare
DVU0232 +0.7 0.6 hypothetical protein (TIGR) compare
DVU2454 +0.7 0.4 hypothetical protein (TIGR) compare
DVU1737 +0.7 1.8 conserved hypothetical protein (TIGR) compare
DVU1726 +0.7 1.3 hypothetical protein (TIGR) compare
DVU2946 +0.7 2.4 hypothetical protein (TIGR) compare
DVU1944 oorD +0.6 1.7 pyruvate ferredoxin oxidoreductase, iron-sulfur binding subunit, putative (TIGR) compare
DVU1253 +0.6 1.9 hypothetical protein (TIGR) compare
DVU1862 +0.6 3.5 GGDEF domain protein (TIGR) compare
DVU1827 +0.6 4.2 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase family protein (TIGR) compare
DVU0314 fliE +0.6 1.9 flagellar basal body component FliE (TIGR) compare
DVU1996 +0.6 1.7 quaternary ammonium compound-resistance protein QacC, putative (TIGR) compare
DVU0312 fliG +0.6 3.8 flagellar motor switch protein FliG (TIGR) compare
DVU0001 dnaA-1 +0.6 2.4 chromosomal replication initiator protein DnaA (TIGR) compare
DVU0726 tgt +0.6 4.1 queuine tRNA-ribosyltransferase (TIGR) compare
DORF26828 +0.6 1.7 SEED: FIG00605560: hypothetical protein compare
DVU0859 +0.6 4.1 hypothetical protein (TIGR) compare
DVU0257 +0.6 1.0 acetyltransferase, GNAT family (TIGR) compare
DVU1816 +0.6 2.2 conserved hypothetical protein (TIGR) compare
DVU3133 glpF +0.6 1.4 glycerol uptake facilitator protein (TIGR) compare
DVU0533 hmcD +0.6 0.7 HmcD, 5.8 kd protein in hmc operon (voordouw) compare
DVU1075 rnpA +0.6 0.3 ribonuclease P protein component (TIGR) compare
DVU2097 +0.6 1.7 transcriptional regulator, putative (TIGR) compare
DVU2083 relA +0.6 2.1 GTP pyrophosphokinase (TIGR) compare
DVU0511 +0.6 1.3 conserved hypothetical protein (TIGR) compare
DVU2126 +0.6 2.5 hypothetical protein (TIGR) compare
DVU0302 +0.5 2.3 chemotaxis protein CheX, putative (TIGR) compare
DORF12455 +0.5 2.1 SEED: helix-turn-helix protein, CopG family compare
DVU0448 gmd +0.5 0.6 GDP-mannose 4,6-dehydratase (TIGR) compare
DVU3177 +0.5 2.3 hypothetical protein (TIGR) compare
DVU0698 rfbC +0.5 3.6 dTDP-4-dehydrorhamnose 3,5-epimerase (TIGR) compare
DVU2150 dksA +0.5 0.9 dnaK suppressor protein, putative (TIGR) compare
DVU1863 +0.5 2.8 flagellar synthesis regulator FleN, putative (TIGR) compare
DVU1679 idi +0.5 1.2 isopentenyl-diphosphate delta-isomerase (TIGR) compare
DVU1479 +0.5 0.4 conserved hypothetical protein (TIGR) compare
DVU0899 +0.5 0.7 conserved hypothetical protein (TIGR) compare
DVU0280 wbaZ-2 +0.5 1.4 glycosyl transferase, group 1 family protein (TIGR) compare
DVU2881 +0.5 1.1 phage/plasmid primase, P4 family (TIGR) compare
DVU1851 +0.5 2.3 peptidase, M23/M37 family (TIGR) compare
DVU2600 +0.5 1.4 hypothetical protein (TIGR) compare
DORF20226 +0.5 2.2 no description compare
DVU2512 mraW +0.5 1.0 S-adenosyl-methyltransferase MraW (TIGR) compare
DVU1609 dapB +0.5 1.8 dihydrodipicolinate reductase (TIGR) compare
DVU1420 +0.5 0.7 Hpt domain protein (TIGR) compare
DVU0773 +0.5 0.7 hypothetical protein (TIGR) compare
DVU1408 +0.5 1.7 hypothetical protein (TIGR) compare
DVU3351 queA +0.5 3.7 S-adenosylmethionine:tRNA ribosyltransferase-isomerase (TIGR) compare
DVU1946 oorB +0.5 3.0 pyruvate ferredoxin oxidoreductase, beta subunit, putative (TIGR) compare
DVU1084 pstB-1 +0.5 2.1 phosphate ABC transporter, ATP-binding protein (TIGR) compare
DVU3049 +0.5 1.4 hemerythrin family protein (TIGR) compare
DVU2577 +0.5 1.4 DNA-binding response regulator, LuxR family (TIGR) compare
DVU0912 +0.5 2.1 conserved domain protein (TIGR) compare
DVU2624 +0.5 1.2 hypothetical protein (TIGR) compare
DVU3009 +0.5 3.3 radical SAM domain protein (TIGR) compare
DVU1395 +0.5 0.7 C4-type zinc finger protein, DksA/TraR family (TIGR) compare
DVU1720 +0.5 1.8 hypothetical protein (TIGR) compare
DVU0311 +0.5 1.9 flagellar assembly protein FliH, putative (TIGR) compare
DVU0595 +0.5 1.7 conserved hypothetical protein (TIGR) compare
DVU2496 +0.5 1.7 lipoprotein, putative (TIGR) compare
DVU1285 +0.5 0.8 response regulator (TIGR) compare
DVU0937 +0.5 1.9 hypothetical protein (TIGR) compare
DVU0234 +0.4 2.0 hypothetical protein (TIGR) compare
DVU2873 +0.4 0.4 hypothetical protein (TIGR) compare
DVU2430 +0.4 2.6 RNA-binding protein (TIGR) compare
DVU0551 livF +0.4 1.8 high-affinity branched-chain amino acid ABC transporter ATP-binding protein (TIGR) compare
DVU2232 +0.4 2.3 hypothetical protein (TIGR) compare
DVU2712 +0.4 1.1 hypothetical protein (TIGR) compare
DVU0478 +0.4 2.1 Ser/Thr protein phosphatase family (TIGR) compare
DVU1363 rfbD +0.4 1.6 dTDP-4-dehydrorhamnose reductase (TIGR) compare
DVU1669 rluB +0.4 1.4 ribosomal large subunit pseudouridine synthase B (TIGR) compare
DVU1943 +0.4 1.1 hypothetical protein (TIGR) compare
DVU1682 +0.4 1.2 GAF domain protein (TIGR) compare
DVU1129 +0.4 1.7 conserved hypothetical protein (TIGR) compare
DVU2582 +0.4 1.6 transcriptional regulator, TetR family (TIGR) compare
DVU0047 +0.4 2.6 flagellar protein FliL (TIGR) compare
DVU2821 +0.4 1.1 hypothetical protein (TIGR) compare
DVU2060 +0.4 0.9 hypothetical protein (TIGR) compare
DVU2209 +0.4 1.8 conserved hypothetical protein (TIGR) compare
DVU1444 flgD +0.4 2.7 basal-body rod modification protein FlgD (TIGR) compare
DVU1210 +0.4 0.2 conserved hypothetical protein (TIGR) compare
DVU3027 glcD +0.4 1.8 glycolate oxidase, subunit GlcD (TIGR) compare
DVU0046 fliN +0.4 2.6 flagellar motor switch protein FliN (TIGR) compare
DVU1082 +0.4 1.3 3- 5 exonuclease domain protein (TIGR) compare
DVU0164 +0.4 2.0 cation efflux family protein (TIGR) compare
DVU2268 +0.4 0.9 hypothetical protein (TIGR) compare
DVU1375 +0.4 2.3 hypothetical protein (TIGR) compare
DVU2947 +0.4 1.8 anaerobic ribonucleoside-triphosphate reductase, putative (TIGR) compare
DVU0975 +0.4 1.2 conserved hypothetical protein (TIGR) compare
DORF10446 +0.4 3.0 SEED: FIG00604570: hypothetical protein compare
DVU3229 fliA +0.4 2.1 RNA polymerase sigma factor for flagellar operon FliA (TIGR) compare
DVU0013 +0.4 1.6 sensory box histidine kinase (TIGR) compare
DVU2055 metG +0.4 0.4 methionyl-tRNA synthetase (TIGR) compare
DVU1550 +0.4 1.7 phosphoglycerate mutase family protein (TIGR) compare
DVU0305 fd II +0.4 1.4 ferredoxin II (Sean Caffrey) compare
DVU2847 +0.4 1.5 hypothetical protein (TIGR) compare
DVU2553 nifU-3 +0.4 0.9 NifU family protein (TIGR) compare
DVU3016 +0.4 2.4 B12 binding domain protein/radical SAM domain protein (TIGR) compare
DVU2539 +0.4 0.4 hypothetical protein (TIGR) compare
DVU0045 +0.4 2.1 flagellar biosynthesis protein, FliO, putative (TIGR) compare
DVU2720 +0.4 1.2 hypothetical protein (TIGR) compare
DVU0215 +0.4 2.9 tail protein, putative (TIGR) compare
DVU2915 +0.4 1.4 hypothetical protein (TIGR) compare
DVU0205 +0.4 0.8 hypothetical protein (TIGR) compare
DORF38058 +0.4 0.4 SEED: FIG00604017: hypothetical protein compare
DVU1685 +0.4 1.7 conserved hypothetical protein TIGR00046 (TIGR) compare
DVU0339 serA +0.4 2.5 D-isomer specific 2-hydroxyacid dehydrogenase family protein (TIGR) compare
DVU1023 +0.4 2.0 rhomboid family protein (TIGR) compare
DVU0677 +0.4 2.3 transglycosylase domain protein (TIGR) compare
DVU1853 +0.4 0.3 hypothetical protein (TIGR) compare
DVU1621 +0.4 1.0 hypothetical protein (TIGR) compare
DVU3352 +0.4 1.6 lipoprotein, putative (TIGR) compare
DVU1850 +0.4 0.8 CBS domain protein (TIGR) compare
DORF19110 +0.4 2.4 SEED: FIG00607238: hypothetical protein compare
DVU1900 +0.4 2.0 conserved hypothetical protein (TIGR) compare
DVU2809 +0.4 1.5 cytochrome c3 (TIGR) compare
DVU0705 dctM +0.4 2.0 TRAP dicarboxylate transporter, putative (TIGR) compare
DVU1409 +0.4 1.5 hypothetical protein (TIGR) compare
DVU2606 +0.4 1.4 hypothetical protein (TIGR) compare
DVU3215 drrA +0.4 0.5 response regulator (TIGR) compare
DVU0044 fliP +0.4 1.9 flagellar biosynthetic protein fliP (TIGR) compare
DVU0079 gufA +0.4 2.2 ZIP zinc transporter family protein (TIGR) compare
DVU0227 +0.4 1.2 conserved hypothetical protein (TIGR) compare
DORF11409 +0.4 1.4 SEED: FIG00606517: hypothetical protein compare
DVU0451 +0.4 2.9 chloride channel family protein (TIGR) compare
DVU3302 +0.4 1.4 hypothetical protein (TIGR) compare
DVU2909 +0.4 2.6 transcriptional regulator, MarR family (TIGR) compare
DVU2578 +0.4 2.8 response regulator (TIGR) compare
DVU2022 +0.4 2.8 conserved hypothetical protein (TIGR) compare
DVU0515 flgH +0.4 2.3 flagellar L-ring protein FlgH (TIGR) compare
DORF831 +0.4 0.4 SEED: FIG00602593: hypothetical protein compare
DVU0747 cysA +0.4 1.1 ABC transporter, ATP-binding protein (TIGR) compare
DVU3339.1 kdpF +0.4 1.4 potassium-transporting ATPase, KdpF subunit (TIGR) compare
DVU3329 +0.4 2.3 hypothetical protein (TIGR) compare
DVU0790 +0.4 1.8 radical SAM protein, TIGR01212 family (TIGR) compare
DVU0910 fliM +0.4 2.0 flagellar motor switch protein FliM (TIGR) compare
DVU0359 +0.4 2.3 HesB-like domain (TIGR) compare
DVU0630 +0.4 0.9 hypothetical protein (TIGR) compare
DVU1443 flgE +0.4 2.2 flagellar hook protein FlgE (TIGR) compare
DVU1257 +0.4 0.8 RNA-binding protein (TIGR) compare
DVU3232 flhA +0.4 2.8 flagellar biosynthetic protein FlhA (TIGR) compare
DVU1268 +0.4 1.6 hypothetical protein (TIGR) compare
DVU2396 adh +0.4 1.8 alcohol dehydrogenase (Chris Hemme) compare
DORF27863 +0.4 2.5 no description compare
DORF35977 +0.4 1.7 no description compare
DVU2780 +0.4 2.0 membrane protein, putative (TIGR) compare
DVU0376 +0.3 0.5 hypothetical protein (TIGR) compare
DVU1073 +0.3 2.1 conserved domain protein (TIGR) compare
DVU2479 pstA-2 +0.3 2.0 phosphate ABC transporter, permease protein, putative (TIGR) compare
DVU2251 +0.3 0.9 DNA-binding protein (TIGR) compare
DVU3322 +0.3 1.0 conserved domain protein (TIGR) compare
DVU3289 +0.3 0.9 hypothetical protein (TIGR) compare
DVU2661 CueO +0.3 2.5 twin-arginine translocation pathway signal sequence domain protein (TIGR) compare
DVU1670 +0.3 1.5 conserved hypothetical protein (TIGR) compare
DVU1858 +0.3 1.7 cold shock domain protein (TIGR) compare
DVU2183 +0.3 0.5 hypothetical protein (TIGR) compare
DVU3199 +0.3 2.4 conserved hypothetical protein TIGR00103 (TIGR) compare
DVUA0084 +0.3 0.4 transcriptional regulator, AbrB family (TIGR) compare
DVU0310 fliI +0.3 2.5 flagellum-specific ATP synthase FliI (TIGR) compare
DVU1188 +0.3 1.3 hypothetical protein (TIGR) compare
DVU2198 +0.3 0.2 hypothetical protein (TIGR) compare
DVU2212 +0.3 1.9 conserved hypothetical protein (TIGR) compare
DVU0863 +0.3 2.3 flagellar hook-associated protein 2, putative (TIGR) compare
DVU0862 +0.3 1.5 flagellar protein FliS/hypothetical protein, fusion (TIGR) compare
DVU0307 +0.3 2.4 flagella basal body rod domain protein (TIGR) compare
DVU1842 +0.3 0.4 lipoprotein, putative (TIGR) compare
DVU0033 +0.3 1.7 isochorismatase family protein (TIGR) compare
DVU2605 +0.3 1.6 hypothetical protein (TIGR) compare
DVU0903 +0.3 1.6 HD domain protein (TIGR) compare
DVU1634 +0.3 0.4 membrane protein, putative (TIGR) compare
DVU0150 +0.3 0.6 membrane protein, putative (TIGR) compare
DVU0316 flgB +0.3 1.1 flagellar basal-body rod protein FlgB (TIGR) compare
DVU0315 flgC +0.3 2.4 flagellar basal-body rod protein FlgC (TIGR) compare
DVU0690 +0.3 1.1 conserved hypothetical protein (TIGR) compare
DVU0512 flgF +0.3 2.0 flagellar basal-body rod protein, putative (TIGR) compare
DVU0034 +0.3 2.1 DSBA-like thioredoxin domain protein (TIGR) compare
DVU0134 +0.3 2.1 glycosyl transferase, group 2 family protein (TIGR) compare
DVU2331 +0.3 1.4 Smr family protein (TIGR) compare


Specific Phenotypes

None in this experiment

For Desulfovibrio vulgaris Hildenborough JW710 in stress experiments

For stress Polyethylene glycol across organisms