Experiment set12IT071 for Ralstonia sp. UNC404CL21Col

Compare to:

Ra1_0.01

200 most important genes:

  gene name fitness t score description  
ABZR87_RS15250 -5.4 -10.9 PP2C family serine/threonine-protein phosphatase compare
ABZR87_RS07020 -5.3 -16.8 dynamin-like GTPase family protein compare
ABZR87_RS00390 -3.6 -10.8 hybrid sensor histidine kinase/response regulator compare
ABZR87_RS01980 -3.6 -3.4 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS00385 -3.5 -1.9 response regulator transcription factor compare
ABZR87_RS05170 -3.3 -3.2 acetylglutamate kinase compare
ABZR87_RS13175 -3.2 -3.1 tRNA-Leu compare
ABZR87_RS10240 -3.2 -2.2 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS16180 -3.1 -3.7 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS20730 -3.1 -1.9 hypothetical protein compare
ABZR87_RS16170 -2.9 -6.7 argininosuccinate lyase compare
ABZR87_RS11940 -2.9 -2.8 SsrA-binding protein SmpB compare
ABZR87_RS07510 -2.7 -6.4 LysR family transcriptional regulator compare
ABZR87_RS01685 -2.6 -6.9 histone H1-like DNA-binding protein compare
ABZR87_RS01700 -2.4 -2.2 DUF2147 domain-containing protein compare
ABZR87_RS08795 -2.4 -5.5 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS14375 -2.4 -3.8 fumarate hydratase compare
ABZR87_RS00285 -2.3 -2.7 acetylornithine transaminase compare
ABZR87_RS15705 -2.3 -3.1 UvrD-helicase domain-containing protein compare
ABZR87_RS10565 -2.3 -5.2 cupin domain-containing protein compare
ABZR87_RS05590 -2.2 -2.1 orotate phosphoribosyltransferase compare
ABZR87_RS00325 -2.2 -2.8 peptidylprolyl isomerase compare
ABZR87_RS10610 -2.0 -2.3 inositol monophosphatase family protein compare
ABZR87_RS04265 -2.0 -9.8 phenylalanine 4-monooxygenase compare
ABZR87_RS11420 -2.0 -2.9 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
ABZR87_RS08580 -2.0 -3.7 response regulator compare
ABZR87_RS00835 -1.9 -6.2 argininosuccinate synthase compare
ABZR87_RS11125 -1.8 -6.4 cell division protein ZapE compare
ABZR87_RS08750 -1.8 -5.0 lipopolysaccharide heptosyltransferase I compare
ABZR87_RS07705 -1.8 -3.7 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
ABZR87_RS07050 -1.8 -1.7 PTS IIA-like nitrogen regulatory protein PtsN compare
ABZR87_RS13705 -1.7 -1.9 integration host factor subunit alpha compare
ABZR87_RS05645 -1.7 -4.4 SDR family oxidoreductase compare
ABZR87_RS02550 -1.7 -3.7 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR87_RS22280 -1.7 -5.5 flagellar hook assembly protein FlgD compare
ABZR87_RS05100 -1.6 -5.8 RNA polymerase-binding protein DksA compare
ABZR87_RS02535 -1.6 -5.4 phospholipid-binding protein MlaC compare
ABZR87_RS22300 -1.6 -1.4 flagellar biosynthesis anti-sigma factor FlgM compare
ABZR87_RS21225 -1.6 -2.5 LysR family transcriptional regulator compare
ABZR87_RS22190 -1.6 -3.9 flagellar basal body-associated protein FliL compare
ABZR87_RS02545 -1.5 -7.1 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR87_RS08660 -1.5 -5.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS04295 -1.5 -5.5 HU family DNA-binding protein compare
ABZR87_RS07620 -1.5 -3.4 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS02540 -1.5 -7.1 VacJ family lipoprotein compare
ABZR87_RS02485 -1.5 -1.1 MarC family protein compare
ABZR87_RS22260 -1.5 -3.0 flagellar basal body L-ring protein FlgH compare
ABZR87_RS22265 -1.4 -5.0 flagellar basal-body rod protein FlgG compare
ABZR87_RS02555 -1.4 -6.7 ABC transporter ATP-binding protein compare
ABZR87_RS23290 -1.4 -2.2 2-hydroxychromene-2-carboxylate isomerase compare
ABZR87_RS22220 -1.4 -6.2 flagellar biosynthetic protein FliR compare
ABZR87_RS19050 -1.4 -4.0 glycosyltransferase family 39 protein compare
ABZR87_RS10780 -1.4 -3.2 PD-(D/E)XK nuclease family protein compare
ABZR87_RS07700 -1.4 -1.9 peptidylprolyl isomerase compare
ABZR87_RS02445 -1.3 -4.8 Sec-independent protein translocase protein TatB compare
ABZR87_RS22205 -1.3 -3.0 flagellar biosynthetic protein FliO compare
ABZR87_RS05350 -1.3 -4.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS16185 -1.3 -1.9 dCTP deaminase compare
ABZR87_RS16125 -1.3 -5.0 heme biosynthesis protein HemY compare
ABZR87_RS14955 -1.3 -4.8 acetolactate synthase 3 catalytic subunit compare
ABZR87_RS00795 -1.3 -3.4 site-specific tyrosine recombinase XerD compare
ABZR87_RS14965 -1.3 -2.9 DUF3619 family protein compare
ABZR87_RS22075 -1.3 -3.7 flagellar motor switch protein FliG compare
ABZR87_RS14135 -1.3 -3.4 transcription elongation factor GreA compare
ABZR87_RS02850 -1.2 -2.9 elongation factor Tu compare
ABZR87_RS10930 -1.2 -1.3 outer membrane protein assembly factor BamB compare
ABZR87_RS22210 -1.2 -5.3 flagellar type III secretion system pore protein FliP compare
ABZR87_RS08040 -1.2 -4.0 lipopolysaccharide heptosyltransferase II compare
ABZR87_RS22240 -1.2 -6.7 flagellar hook-associated protein FlgL compare
ABZR87_RS12790 -1.2 -3.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
ABZR87_RS09635 -1.2 -1.7 ribosome small subunit-dependent GTPase A compare
ABZR87_RS13350 -1.2 -3.0 potassium transporter Kup compare
ABZR87_RS11015 -1.2 -4.0 amino-acid N-acetyltransferase compare
ABZR87_RS23095 -1.2 -1.4 MarR family transcriptional regulator compare
ABZR87_RS18040 -1.2 -5.8 RNA polymerase sigma factor FliA compare
ABZR87_RS04270 -1.2 -3.6 4a-hydroxytetrahydrobiopterin dehydratase compare
ABZR87_RS00360 -1.2 -1.5 acyl-CoA desaturase compare
ABZR87_RS18030 -1.2 -4.5 flagellar biosynthesis protein FlhF compare
ABZR87_RS09935 -1.2 -3.1 amino acid aminotransferase compare
ABZR87_RS22245 -1.2 -9.0 flagellar hook-associated protein FlgK compare
ABZR87_RS01615 -1.2 -2.6 RNB domain-containing ribonuclease compare
ABZR87_RS10785 -1.2 -3.3 exodeoxyribonuclease V subunit beta compare
ABZR87_RS07710 -1.2 -3.7 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
ABZR87_RS14950 -1.2 -2.0 acetolactate synthase small subunit compare
ABZR87_RS22295 -1.2 -8.6 flagellar basal body P-ring formation chaperone FlgA compare
ABZR87_RS02440 -1.2 -6.8 twin-arginine translocase subunit TatC compare
ABZR87_RS13300 -1.2 -6.0 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS11860 -1.1 -5.1 RIP metalloprotease RseP compare
ABZR87_RS18025 -1.1 -6.7 flagellar biosynthesis protein FlhA compare
ABZR87_RS22255 -1.1 -4.0 flagellar basal body P-ring protein FlgI compare
ABZR87_RS22270 -1.1 -5.6 flagellar basal-body rod protein FlgF compare
ABZR87_RS02640 -1.1 -7.4 diaminopimelate decarboxylase compare
ABZR87_RS18015 -1.1 -5.3 flagellar biosynthesis protein FlhB compare
ABZR87_RS11495 -1.1 -2.4 NADPH-dependent FMN reductase compare
ABZR87_RS13475 -1.1 -4.6 PAS domain S-box protein compare
ABZR87_RS22015 -1.1 -2.2 hypothetical protein compare
ABZR87_RS22290 -1.1 -4.6 flagellar basal body rod protein FlgB compare
ABZR87_RS10165 -1.1 -6.7 RNA polymerase sigma factor RpoE compare
ABZR87_RS22275 -1.1 -7.0 flagellar hook protein FlgE compare
ABZR87_RS22080 -1.0 -6.8 flagellar basal-body MS-ring/collar protein FliF compare
ABZR87_RS04125 -1.0 -4.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS22195 -1.0 -6.8 flagellar motor switch protein FliM compare
ABZR87_RS12795 -1.0 -3.7 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS06645 -1.0 -2.4 TlpA disulfide reductase family protein compare
ABZR87_RS22285 -1.0 -1.9 flagellar basal body rod protein FlgC compare
ABZR87_RS08625 -1.0 -1.3 aspartate carbamoyltransferase catalytic subunit compare
ABZR87_RS09710 -1.0 -1.9 tRNA-Arg compare
ABZR87_RS22305 -1.0 -3.8 flagella synthesis protein FlgN compare
ABZR87_RS20450 -1.0 -1.1 HAD family phosphatase compare
ABZR87_RS01690 -1.0 -1.1 collagen-like triple helix repeat-containing protein compare
ABZR87_RS01255 -1.0 -5.9 LysR substrate-binding domain-containing protein compare
ABZR87_RS07625 -1.0 -1.7 Holliday junction branch migration protein RuvA compare
ABZR87_RS16055 -1.0 -4.2 outer membrane lipoprotein chaperone LolA compare
ABZR87_RS20495 -0.9 -1.2 hypothetical protein compare
ABZR87_RS22065 -0.9 -3.9 flagellar protein export ATPase FliI compare
ABZR87_RS12070 -0.9 -1.7 porin compare
ABZR87_RS18105 -0.9 -1.2 hypothetical protein compare
ABZR87_RS09820 -0.9 -2.3 RidA family protein compare
ABZR87_RS03915 -0.9 -6.2 UvrD-helicase domain-containing protein compare
ABZR87_RS09500 -0.9 -2.1 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
ABZR87_RS21940 -0.9 -0.7 hypothetical protein compare
ABZR87_RS16060 -0.9 -4.2 DNA translocase FtsK compare
ABZR87_RS22250 -0.9 -4.2 flagellar assembly peptidoglycan hydrolase FlgJ compare
ABZR87_RS20500 -0.9 -1.0 hypothetical protein compare
ABZR87_RS13995 -0.9 -3.4 aldo/keto reductase compare
ABZR87_RS18035 -0.9 -2.5 flagellar synthesis regulator FleN compare
ABZR87_RS01885 -0.9 -2.1 bifunctional glutamate N-acetyltransferase/amino-acid acetyltransferase ArgJ compare
ABZR87_RS11790 -0.9 -2.3 cell division protein ZipA C-terminal FtsZ-binding domain-containing protein compare
ABZR87_RS15490 -0.9 -5.0 glycosyltransferase family 2 protein compare
ABZR87_RS13500 -0.8 -1.9 homoprotocatechuate degradation operon regulator HpaR compare
ABZR87_RS22485 -0.8 -4.1 FAD-dependent oxidoreductase compare
ABZR87_RS13205 -0.8 -2.1 hypothetical protein compare
ABZR87_RS05145 -0.8 -1.3 copper chaperone PCu(A)C compare
ABZR87_RS07635 -0.8 -1.4 crossover junction endodeoxyribonuclease RuvC compare
ABZR87_RS16580 -0.8 -2.6 ABC transporter ATP-binding protein compare
ABZR87_RS14115 -0.8 -3.1 ATP-dependent zinc metalloprotease FtsH compare
ABZR87_RS02145 -0.8 -1.1 aminodeoxychorismate/anthranilate synthase component II compare
ABZR87_RS23035 -0.8 -1.0 PIG-L family deacetylase compare
ABZR87_RS00875 -0.8 -3.2 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS17995 -0.8 -1.9 chemotaxis response regulator CheY compare
ABZR87_RS13290 -0.8 -3.5 3-ketoacyl-ACP reductase compare
ABZR87_RS21170 -0.8 -1.6 ABC transporter ATP-binding protein compare
ABZR87_RS05065 -0.8 -2.6 tyrosine recombinase XerC compare
ABZR87_RS23115 -0.8 -4.6 hypothetical protein compare
ABZR87_RS17945 -0.8 -4.5 flagellar motor stator protein MotA compare
ABZR87_RS11245 -0.8 -3.3 translational GTPase TypA compare
ABZR87_RS19760 -0.8 -3.1 DUF2282 domain-containing protein compare
ABZR87_RS09505 -0.8 -2.9 ADP-glyceromanno-heptose 6-epimerase compare
ABZR87_RS22920 -0.8 -2.6 phosphogluconate dehydratase compare
ABZR87_RS02565 -0.8 -3.1 glutamate synthase subunit beta compare
ABZR87_RS05580 -0.8 -1.6 diaminopimelate epimerase compare
ABZR87_RS10395 -0.8 -3.2 single-stranded-DNA-specific exonuclease RecJ compare
ABZR87_RS18730 -0.7 -1.8 redoxin domain-containing protein compare
ABZR87_RS14680 -0.7 -1.1 SDR family oxidoreductase compare
ABZR87_RS19010 -0.7 -1.4 acyloxyacyl hydrolase compare
ABZR87_RS09700 -0.7 -1.8 DEAD/DEAH box helicase compare
ABZR87_RS00200 -0.7 -3.1 phosphoadenylyl-sulfate reductase compare
ABZR87_RS00690 -0.7 -2.0 ester cyclase compare
ABZR87_RS13240 -0.7 -5.3 transcription-repair coupling factor compare
ABZR87_RS00085 -0.7 -1.8 ABC transporter ATP-binding protein compare
ABZR87_RS13315 -0.7 -4.1 RluA family pseudouridine synthase compare
ABZR87_RS22055 -0.7 -1.6 flagellar hook-length control protein FliK compare
ABZR87_RS09560 -0.7 -4.7 D-amino acid dehydrogenase compare
ABZR87_RS10525 -0.7 -1.2 L-threonylcarbamoyladenylate synthase compare
ABZR87_RS04865 -0.7 -2.9 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS09940 -0.7 -5.2 excinuclease ABC subunit UvrB compare
ABZR87_RS13050 -0.7 -0.9 GpE family phage tail protein compare
ABZR87_RS04940 -0.7 -2.8 PAS domain-containing sensor histidine kinase compare
ABZR87_RS03705 -0.7 -1.0 DUF2892 domain-containing protein compare
ABZR87_RS01270 -0.7 -4.0 ATP-dependent DNA helicase RecG compare
ABZR87_RS11180 -0.7 -2.6 fumarate/nitrate reduction transcriptional regulator Fnr compare
ABZR87_RS08235 -0.7 -0.9 hypothetical protein compare
ABZR87_RS22625 -0.7 -2.5 hypothetical protein compare
ABZR87_RS12785 -0.7 -2.3 endopeptidase La compare
ABZR87_RS03180 -0.7 -1.0 hypothetical protein compare
ABZR87_RS19980 -0.7 -1.3 DUF1488 domain-containing protein compare
ABZR87_RS07535 -0.7 -1.5 amino acid ABC transporter ATP-binding protein compare
ABZR87_RS07730 -0.7 -1.0 lysophospholipid acyltransferase family protein compare
ABZR87_RS14090 -0.7 -3.2 phosphate ABC transporter permease PstA compare
ABZR87_RS01055 -0.7 -3.9 heat-inducible transcriptional repressor HrcA compare
ABZR87_RS16130 -0.7 -2.3 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
ABZR87_RS19455 -0.6 -2.8 NADPH-dependent 2,4-dienoyl-CoA reductase compare
ABZR87_RS10700 -0.6 -4.0 C40 family peptidase compare
ABZR87_RS09440 -0.6 -2.2 DUF2059 domain-containing protein compare
ABZR87_RS13330 -0.6 -1.5 DUF465 domain-containing protein compare
ABZR87_RS07100 -0.6 -2.6 DJ-1/PfpI family protein compare
ABZR87_RS12300 -0.6 -2.3 muconolactone Delta-isomerase compare
ABZR87_RS02345 -0.6 -1.7 hypothetical protein compare
ABZR87_RS14160 -0.6 -5.1 transglycosylase SLT domain-containing protein compare
ABZR87_RS15305 -0.6 -1.3 pyroglutamyl-peptidase I compare
ABZR87_RS11375 -0.6 -4.1 inorganic phosphate transporter compare
ABZR87_RS09625 -0.6 -4.0 CobD/CbiB family protein compare
ABZR87_RS15030 -0.6 -3.7 substrate-binding domain-containing protein compare
ABZR87_RS10650 -0.6 -3.0 DNA-3-methyladenine glycosylase compare
ABZR87_RS02630 -0.6 -2.4 iron donor protein CyaY compare
ABZR87_RS08530 -0.6 -1.7 Flp family type IVb pilin compare
ABZR87_RS10195 -0.6 -1.3 signal peptidase I compare
ABZR87_RS20090 -0.6 -1.8 universal stress protein compare
ABZR87_RS22090 -0.6 -4.3 glycosyltransferase family 2 protein compare
ABZR87_RS05570 -0.6 -3.2 lysophospholipid acyltransferase family protein compare


Specific Phenotypes

For 4 genes in this experiment

For phage Kanamycin in Ralstonia sp. UNC404CL21Col

For phage Kanamycin across organisms