Experiment set12IT070 for Ralstonia sp. UNC404CL21Col

Compare to:

Ra1_0.1

200 most important genes:

  gene name fitness t score description  
ABZR87_RS15250 -5.7 -3.9 PP2C family serine/threonine-protein phosphatase compare
ABZR87_RS07020 -5.1 -10.5 dynamin-like GTPase family protein compare
ABZR87_RS00390 -3.9 -12.3 hybrid sensor histidine kinase/response regulator compare
ABZR87_RS08580 -3.8 -3.7 response regulator compare
ABZR87_RS22210 -3.7 -7.8 flagellar type III secretion system pore protein FliP compare
ABZR87_RS22260 -3.4 -3.4 flagellar basal body L-ring protein FlgH compare
ABZR87_RS22255 -3.4 -4.6 flagellar basal body P-ring protein FlgI compare
ABZR87_RS11860 -3.1 -7.0 RIP metalloprotease RseP compare
ABZR87_RS22055 -2.9 -3.5 flagellar hook-length control protein FliK compare
ABZR87_RS08040 -2.9 -4.8 lipopolysaccharide heptosyltransferase II compare
ABZR87_RS02485 -2.8 -1.2 MarC family protein compare
ABZR87_RS01980 -2.7 -1.9 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH compare
ABZR87_RS18040 -2.7 -8.0 RNA polymerase sigma factor FliA compare
ABZR87_RS02550 -2.7 -4.1 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
ABZR87_RS22240 -2.6 -7.8 flagellar hook-associated protein FlgL compare
ABZR87_RS22265 -2.6 -4.9 flagellar basal-body rod protein FlgG compare
ABZR87_RS13130 -2.6 -6.0 ogr/Delta-like zinc finger family protein compare
ABZR87_RS22290 -2.6 -5.2 flagellar basal body rod protein FlgB compare
ABZR87_RS18030 -2.5 -7.2 flagellar biosynthesis protein FlhF compare
ABZR87_RS02555 -2.5 -6.0 ABC transporter ATP-binding protein compare
ABZR87_RS08795 -2.5 -4.1 undecaprenyl-diphosphate phosphatase compare
ABZR87_RS18025 -2.5 -9.0 flagellar biosynthesis protein FlhA compare
ABZR87_RS01685 -2.4 -4.9 histone H1-like DNA-binding protein compare
ABZR87_RS22190 -2.4 -5.1 flagellar basal body-associated protein FliL compare
ABZR87_RS10165 -2.4 -11.2 RNA polymerase sigma factor RpoE compare
ABZR87_RS03780 -2.3 -1.3 thiosulfate oxidation carrier protein SoxY compare
ABZR87_RS22220 -2.3 -5.6 flagellar biosynthetic protein FliR compare
ABZR87_RS22295 -2.2 -12.3 flagellar basal body P-ring formation chaperone FlgA compare
ABZR87_RS14745 -2.2 -1.7 urease subunit gamma compare
ABZR87_RS07510 -2.2 -3.9 LysR family transcriptional regulator compare
ABZR87_RS01690 -2.2 -1.4 collagen-like triple helix repeat-containing protein compare
ABZR87_RS22080 -2.1 -9.8 flagellar basal-body MS-ring/collar protein FliF compare
ABZR87_RS15490 -2.1 -8.5 glycosyltransferase family 2 protein compare
ABZR87_RS22270 -2.1 -6.7 flagellar basal-body rod protein FlgF compare
ABZR87_RS16060 -2.1 -6.0 DNA translocase FtsK compare
ABZR87_RS09500 -2.0 -2.7 D-glycero-beta-D-manno-heptose-7-phosphate kinase compare
ABZR87_RS02535 -2.0 -4.6 phospholipid-binding protein MlaC compare
ABZR87_RS18015 -2.0 -7.1 flagellar biosynthesis protein FlhB compare
ABZR87_RS22195 -2.0 -8.8 flagellar motor switch protein FliM compare
ABZR87_RS11790 -2.0 -2.3 cell division protein ZipA C-terminal FtsZ-binding domain-containing protein compare
ABZR87_RS22280 -2.0 -4.0 flagellar hook assembly protein FlgD compare
ABZR87_RS02640 -1.9 -11.6 diaminopimelate decarboxylase compare
ABZR87_RS22250 -1.9 -6.4 flagellar assembly peptidoglycan hydrolase FlgJ compare
ABZR87_RS22305 -1.9 -4.8 flagella synthesis protein FlgN compare
ABZR87_RS00385 -1.9 -1.6 response regulator transcription factor compare
ABZR87_RS02545 -1.9 -5.5 outer membrane lipid asymmetry maintenance protein MlaD compare
ABZR87_RS14625 -1.9 -2.4 hypothetical protein compare
ABZR87_RS05645 -1.9 -3.1 SDR family oxidoreductase compare
ABZR87_RS05100 -1.9 -5.3 RNA polymerase-binding protein DksA compare
ABZR87_RS10045 -1.9 -1.2 lactate utilization protein C compare
ABZR87_RS22075 -1.9 -4.8 flagellar motor switch protein FliG compare
ABZR87_RS22275 -1.9 -8.2 flagellar hook protein FlgE compare
ABZR87_RS11015 -1.8 -4.6 amino-acid N-acetyltransferase compare
ABZR87_RS22245 -1.8 -11.0 flagellar hook-associated protein FlgK compare
ABZR87_RS17595 -1.8 -1.9 hypothetical protein compare
ABZR87_RS02445 -1.8 -3.7 Sec-independent protein translocase protein TatB compare
ABZR87_RS00875 -1.8 -3.6 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
ABZR87_RS22205 -1.8 -2.6 flagellar biosynthetic protein FliO compare
ABZR87_RS16125 -1.7 -4.2 heme biosynthesis protein HemY compare
ABZR87_RS09180 -1.7 -2.9 thioredoxin domain-containing protein compare
ABZR87_RS01580 -1.7 -3.0 CinA family protein compare
ABZR87_RS02440 -1.7 -8.0 twin-arginine translocase subunit TatC compare
ABZR87_RS18080 -1.7 -1.7 hypothetical protein compare
ABZR87_RS07005 -1.7 -1.6 lipoprotein insertase outer membrane protein LolB compare
ABZR87_RS20785 -1.7 -1.3 DUF2783 domain-containing protein compare
ABZR87_RS21815 -1.7 -1.0 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS16185 -1.6 -1.1 dCTP deaminase compare
ABZR87_RS22285 -1.6 -2.7 flagellar basal body rod protein FlgC compare
ABZR87_RS22165 -1.6 -3.0 flagellar export chaperone FliS compare
ABZR87_RS02540 -1.6 -5.2 VacJ family lipoprotein compare
ABZR87_RS01615 -1.6 -2.0 RNB domain-containing ribonuclease compare
ABZR87_RS04865 -1.6 -3.3 methylenetetrahydrofolate reductase [NAD(P)H] compare
ABZR87_RS00325 -1.6 -1.5 peptidylprolyl isomerase compare
ABZR87_RS10565 -1.5 -2.5 cupin domain-containing protein compare
ABZR87_RS08200 -1.5 -7.7 HD-GYP domain-containing protein compare
ABZR87_RS10275 -1.5 -2.1 DUF5818 domain-containing protein compare
ABZR87_RS19435 -1.5 -3.4 trehalose-phosphatase compare
ABZR87_RS13515 -1.5 -3.6 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
ABZR87_RS17995 -1.5 -1.9 chemotaxis response regulator CheY compare
ABZR87_RS01780 -1.5 -0.9 MarC family protein compare
ABZR87_RS10610 -1.5 -1.4 inositol monophosphatase family protein compare
ABZR87_RS04295 -1.5 -3.7 HU family DNA-binding protein compare
ABZR87_RS16885 -1.4 -1.4 hypothetical protein compare
ABZR87_RS04265 -1.4 -6.3 phenylalanine 4-monooxygenase compare
ABZR87_RS16180 -1.4 -1.4 arginine/lysine/ornithine decarboxylase compare
ABZR87_RS10395 -1.4 -4.1 single-stranded-DNA-specific exonuclease RecJ compare
ABZR87_RS05170 -1.3 -1.6 acetylglutamate kinase compare
ABZR87_RS00625 -1.3 -1.8 hypothetical protein compare
ABZR87_RS13175 -1.3 -1.3 tRNA-Leu compare
ABZR87_RS13290 -1.3 -3.7 3-ketoacyl-ACP reductase compare
ABZR87_RS13145 -1.3 -1.4 hypothetical protein compare
ABZR87_RS05350 -1.3 -3.5 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE compare
ABZR87_RS09505 -1.3 -3.9 ADP-glyceromanno-heptose 6-epimerase compare
ABZR87_RS14330 -1.3 -0.8 hypothetical protein compare
ABZR87_RS14160 -1.3 -7.1 transglycosylase SLT domain-containing protein compare
ABZR87_RS11760 -1.3 -1.0 membrane protein compare
ABZR87_RS22060 -1.3 -2.5 flagellar export protein FliJ compare
ABZR87_RS04270 -1.3 -2.8 4a-hydroxytetrahydrobiopterin dehydratase compare
ABZR87_RS11420 -1.3 -1.2 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
ABZR87_RS23360 -1.3 -1.9 chemotaxis response regulator protein-glutamate methylesterase compare
ABZR87_RS02400 -1.3 -5.5 Do family serine endopeptidase compare
ABZR87_RS16130 -1.2 -3.5 fused uroporphyrinogen-III synthase HemD/membrane protein HemX compare
ABZR87_RS06300 -1.2 -2.5 SDR family oxidoreductase compare
ABZR87_RS08045 -1.2 -3.2 zinc-finger domain-containing protein compare
ABZR87_RS11245 -1.2 -3.5 translational GTPase TypA compare
ABZR87_RS17945 -1.2 -5.5 flagellar motor stator protein MotA compare
ABZR87_RS11990 -1.2 -1.8 hypothetical protein compare
ABZR87_RS01055 -1.2 -4.9 heat-inducible transcriptional repressor HrcA compare
ABZR87_RS22300 -1.2 -0.9 flagellar biosynthesis anti-sigma factor FlgM compare
ABZR87_RS06645 -1.2 -1.6 TlpA disulfide reductase family protein compare
ABZR87_RS17990 -1.2 -4.6 chemotaxis response regulator protein-glutamate methylesterase compare
ABZR87_RS00835 -1.2 -2.7 argininosuccinate synthase compare
ABZR87_RS22105 -1.2 -3.4 dTDP-4-dehydrorhamnose 3,5-epimerase compare
ABZR87_RS16225 -1.1 -2.1 twin-arginine translocation signal domain-containing protein compare
ABZR87_RS11330 -1.1 -1.0 transcriptional repressor LexA compare
ABZR87_RS22415 -1.1 -1.7 universal stress protein compare
ABZR87_RS17290 -1.1 -7.5 EAL domain-containing protein compare
ABZR87_RS09565 -1.1 -4.8 Lrp/AsnC ligand binding domain-containing protein compare
ABZR87_RS22175 -1.1 -4.6 flagellin compare
ABZR87_RS02660 -1.1 -3.0 RNA polymerase sigma factor compare
ABZR87_RS09710 -1.1 -2.1 tRNA-Arg compare
ABZR87_RS22065 -1.1 -3.0 flagellar protein export ATPase FliI compare
ABZR87_RS13240 -1.1 -6.5 transcription-repair coupling factor compare
ABZR87_RS09560 -1.1 -5.7 D-amino acid dehydrogenase compare
ABZR87_RS15380 -1.1 -1.5 SDR family oxidoreductase compare
ABZR87_RS11375 -1.1 -6.1 inorganic phosphate transporter compare
ABZR87_RS03665 -1.1 -2.8 MarR family transcriptional regulator compare
ABZR87_RS08750 -1.1 -2.5 lipopolysaccharide heptosyltransferase I compare
ABZR87_RS03075 -1.1 -3.7 AGE family epimerase/isomerase compare
ABZR87_RS05130 -1.1 -1.0 CsbD family protein compare
ABZR87_RS09440 -1.1 -3.4 DUF2059 domain-containing protein compare
ABZR87_RS17625 -1.1 -2.5 SDR family oxidoreductase compare
ABZR87_RS10945 -1.1 -3.6 GTPase HflX compare
ABZR87_RS15505 -1.1 -0.8 DNA polymerase III subunit alpha compare
ABZR87_RS18400 -1.1 -1.1 hypothetical protein compare
ABZR87_RS16055 -1.0 -3.5 outer membrane lipoprotein chaperone LolA compare
ABZR87_RS20735 -1.0 -4.7 surface-adhesin E family protein compare
ABZR87_RS22370 -1.0 -1.1 four-helix bundle copper-binding protein compare
ABZR87_RS22485 -1.0 -3.9 FAD-dependent oxidoreductase compare
ABZR87_RS09945 -1.0 -4.2 recombinase compare
ABZR87_RS22710 -1.0 -3.0 VOC family protein compare
ABZR87_RS11940 -1.0 -1.2 SsrA-binding protein SmpB compare
ABZR87_RS03420 -1.0 -0.8 type II secretion system minor pseudopilin GspI compare
ABZR87_RS10070 -1.0 -1.3 gephyrin-like molybdotransferase Glp compare
ABZR87_RS11170 -1.0 -0.8 FixH family protein compare
ABZR87_RS01255 -1.0 -5.4 LysR substrate-binding domain-containing protein compare
ABZR87_RS19970 -1.0 -1.0 hypothetical protein compare
ABZR87_RS10240 -1.0 -1.0 elongation factor P maturation arginine rhamnosyltransferase EarP compare
ABZR87_RS02565 -1.0 -3.1 glutamate synthase subunit beta compare
ABZR87_RS22090 -1.0 -5.5 glycosyltransferase family 2 protein compare
ABZR87_RS13475 -1.0 -2.3 PAS domain S-box protein compare
ABZR87_RS05065 -1.0 -2.2 tyrosine recombinase XerC compare
ABZR87_RS22860 -1.0 -2.8 hypothetical protein compare
ABZR87_RS00285 -0.9 -0.9 acetylornithine transaminase compare
ABZR87_RS09635 -0.9 -0.6 ribosome small subunit-dependent GTPase A compare
ABZR87_RS16875 -0.9 -2.4 response regulator transcription factor compare
ABZR87_RS23265 -0.9 -1.8 MarR family winged helix-turn-helix transcriptional regulator compare
ABZR87_RS18860 -0.9 -2.4 hypothetical protein compare
ABZR87_RS08635 -0.9 -3.8 lysophospholipid acyltransferase family protein compare
ABZR87_RS13300 -0.9 -3.5 class I poly(R)-hydroxyalkanoic acid synthase compare
ABZR87_RS11470 -0.9 -2.3 molybdenum cofactor biosynthesis protein MoaE compare
ABZR87_RS21270 -0.9 -2.7 SRPBCC family protein compare
ABZR87_RS10120 -0.9 -0.8 YceD family protein compare
ABZR87_RS19760 -0.9 -2.3 DUF2282 domain-containing protein compare
ABZR87_RS12385 -0.9 -1.0 AraC family transcriptional regulator compare
ABZR87_RS22830 -0.9 -1.3 Crp/Fnr family transcriptional regulator compare
ABZR87_RS12795 -0.9 -2.3 ATP-dependent Clp endopeptidase proteolytic subunit ClpP compare
ABZR87_RS19980 -0.9 -1.9 DUF1488 domain-containing protein compare
ABZR87_RS19050 -0.9 -1.9 glycosyltransferase family 39 protein compare
ABZR87_RS16720 -0.9 -1.4 collagen-like triple helix repeat-containing protein compare
ABZR87_RS13120 -0.9 -2.1 helix-turn-helix transcriptional regulator compare
ABZR87_RS09940 -0.9 -4.8 excinuclease ABC subunit UvrB compare
ABZR87_RS14445 -0.9 -2.2 PRC-barrel domain-containing protein compare
ABZR87_RS07625 -0.8 -1.1 Holliday junction branch migration protein RuvA compare
ABZR87_RS09625 -0.8 -4.2 CobD/CbiB family protein compare
ABZR87_RS11735 -0.8 -0.9 chitin-binding domain-containing protein compare
ABZR87_RS17360 -0.8 -4.3 glucan biosynthesis protein compare
ABZR87_RS10525 -0.8 -0.7 L-threonylcarbamoyladenylate synthase compare
ABZR87_RS04125 -0.8 -2.9 tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG compare
ABZR87_RS15485 -0.8 -1.5 glycosyltransferase family 2 protein compare
ABZR87_RS07700 -0.8 -0.6 peptidylprolyl isomerase compare
ABZR87_RS18105 -0.8 -0.8 hypothetical protein compare
ABZR87_RS03705 -0.8 -1.0 DUF2892 domain-containing protein compare
ABZR87_RS08035 -0.8 -2.8 nuclear transport factor 2 family protein compare
ABZR87_RS20730 -0.8 -0.8 hypothetical protein compare
ABZR87_RS07010 -0.8 -3.9 tetratricopeptide repeat protein compare
ABZR87_RS06825 -0.8 -1.0 twin transmembrane helix small protein compare
ABZR87_RS14595 -0.8 -2.6 hypothetical protein compare
ABZR87_RS16115 -0.8 -3.2 SDR family oxidoreductase compare
ABZR87_RS01785 -0.8 -3.3 2OG-Fe(II) oxygenase compare
ABZR87_RS17850 -0.8 -2.2 2-hydroxychromene-2-carboxylate isomerase compare
ABZR87_RS02075 -0.8 -0.9 23S ribosomal RNA compare
ABZR87_RS17315 -0.8 -2.0 MarR family transcriptional regulator compare
ABZR87_RS18730 -0.8 -1.9 redoxin domain-containing protein compare
ABZR87_RS18065 -0.8 -2.3 LuxR family transcriptional regulator compare
ABZR87_RS07620 -0.8 -1.2 Holliday junction branch migration DNA helicase RuvB compare
ABZR87_RS15705 -0.8 -0.9 UvrD-helicase domain-containing protein compare
ABZR87_RS11125 -0.8 -2.0 cell division protein ZapE compare
ABZR87_RS18320 -0.8 -0.7 HEAT repeat domain-containing protein compare
ABZR87_RS18910 -0.8 -1.0 DUF2239 family protein compare


Specific Phenotypes

For 22 genes in this experiment

For phage Kanamycin in Ralstonia sp. UNC404CL21Col

For phage Kanamycin across organisms