Experiment set12IT044 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26570 -5.9 -4.1 anion permease compare
BWI76_RS24400 -5.4 -3.7 outer membrane channel protein TolC compare
BWI76_RS04465 -4.7 -5.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS01210 -4.2 -3.5 tyrosine recombinase XerC compare
BWI76_RS23920 -4.0 -8.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04470 -3.9 -12.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS20650 -3.9 -2.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS18135 -3.8 -7.3 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS05015 -3.8 -3.5 transcriptional regulator compare
BWI76_RS09755 -3.7 -7.1 phosphoserine transaminase compare
BWI76_RS18940 -3.5 -4.8 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS25225 -3.4 -11.1 ABC transporter permease compare
BWI76_RS19845 -3.4 -12.1 phosphatase compare
BWI76_RS18140 -3.2 -4.9 zinc ABC transporter permease compare
BWI76_RS25215 -3.2 -5.9 phospholipid-binding protein MlaC compare
BWI76_RS25115 -3.1 -10.6 argininosuccinate synthase compare
BWI76_RS20895 -3.1 -5.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS18130 -3.0 -5.3 zinc ABC transporter substrate-binding protein compare
BWI76_RS02530 -3.0 -3.3 tRNA dimethylallyltransferase compare
BWI76_RS04160 -3.0 -7.0 phosphoserine phosphatase compare
BWI76_RS09660 -3.0 -2.0 DNA translocase FtsK compare
BWI76_RS25230 -3.0 -8.8 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS18935 -2.9 -9.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04250 -2.8 -7.2 homoserine kinase compare
BWI76_RS01615 -2.8 -11.9 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS07070 -2.8 -6.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS20435 -2.8 -2.3 chorismate synthase compare
BWI76_RS17720 -2.7 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS27310 -2.7 -10.5 glycosyltransferase compare
BWI76_RS20475 -2.7 -5.6 phospholipid-binding lipoprotein MlaA compare
BWI76_RS23480 -2.7 -11.1 EAL domain-containing protein compare
BWI76_RS01610 -2.6 -9.2 phosphoribosylamine--glycine ligase compare
BWI76_RS00850 -2.6 -11.2 acetylglutamate kinase compare
BWI76_RS23240 -2.6 -4.3 exonuclease V subunit gamma compare
BWI76_RS00845 -2.6 -9.2 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04255 -2.6 -8.2 threonine synthase compare
BWI76_RS23360 -2.6 -3.3 diaminopimelate decarboxylase compare
BWI76_RS23230 -2.6 -4.2 exodeoxyribonuclease V subunit beta compare
BWI76_RS03010 -2.5 -7.7 ornithine carbamoyltransferase compare
BWI76_RS00400 -2.5 -2.5 glutamine synthetase compare
BWI76_RS05840 -2.5 -6.9 glutamate 5-kinase compare
BWI76_RS00855 -2.5 -9.4 argininosuccinate lyase compare
BWI76_RS21265 -2.4 -14.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS26460 -2.4 -3.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS20355 -2.4 -4.7 colicin V production protein compare
BWI76_RS18950 -2.4 -5.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS05260 -2.4 -3.0 chaperone compare
BWI76_RS09760 -2.3 -8.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS04240 -2.3 -4.0 thr operon leader peptide compare
BWI76_RS18930 -2.3 -7.7 histidinol-phosphate transaminase compare
BWI76_RS06775 -2.2 -11.3 multidrug efflux RND transporter permease subunit compare
BWI76_RS23220 -2.2 -5.6 amino-acid N-acetyltransferase compare
BWI76_RS00805 -2.1 -6.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS20350 -2.1 -9.6 amidophosphoribosyltransferase compare
BWI76_RS25220 -2.1 -4.5 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS06765 -2.1 -5.0 transcriptional regulator compare
BWI76_RS08500 -2.1 -4.6 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS18920 -2.1 -3.3 ATP phosphoribosyltransferase compare
BWI76_RS20965 -2.1 -3.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26200 -2.0 -8.1 starch synthase compare
BWI76_RS06780 -2.0 -4.3 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS17975 -2.0 -5.2 tail-specific protease compare
BWI76_RS18925 -2.0 -4.6 histidinol dehydrogenase compare
BWI76_RS09635 -2.0 -3.0 amino acid ABC transporter ATP-binding protein compare
BWI76_RS04245 -2.0 -11.9 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00990 -2.0 -8.8 ketol-acid reductoisomerase compare
BWI76_RS01330 -2.0 -3.9 twin-arginine translocase subunit TatC compare
BWI76_RS21565 -1.9 -1.6 outer membrane protein assembly factor BamE compare
BWI76_RS22805 -1.9 -9.0 GTP diphosphokinase compare
BWI76_RS04685 -1.9 -9.8 putative leucine operon leader peptide compare
BWI76_RS00975 -1.9 -8.0 dihydroxy-acid dehydratase compare
BWI76_RS08385 -1.9 -3.1 citrate (Si)-synthase compare
BWI76_RS04670 -1.9 -7.0 3-isopropylmalate dehydratase large subunit compare
BWI76_RS00345 -1.9 -3.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS00980 -1.8 -9.5 PLP-dependent threonine dehydratase compare
BWI76_RS07065 -1.8 -6.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS18955 -1.8 -6.5 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS09640 -1.8 -3.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS00835 -1.7 -10.0 phosphoenolpyruvate carboxylase compare
BWI76_RS04665 -1.7 -12.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS21070 -1.7 -3.0 outer membrane protein assembly factor BamB compare
BWI76_RS26620 -1.7 -1.7 Fe-S biogenesis protein NfuA compare
BWI76_RS26455 -1.7 -4.5 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04680 -1.7 -11.4 2-isopropylmalate synthase compare
BWI76_RS04675 -1.7 -5.0 3-isopropylmalate dehydrogenase compare
BWI76_RS08495 -1.7 -6.0 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS04645 -1.7 -5.6 3-dehydroquinase compare
BWI76_RS23365 -1.7 -3.9 LysR family transcriptional regulator compare
BWI76_RS05835 -1.6 -2.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS26000 -1.6 -8.1 aspartate aminotransferase family protein compare
BWI76_RS06770 -1.5 -8.4 Hha toxicity attenuator compare
BWI76_RS01800 -1.5 -4.1 glucose-6-phosphate isomerase compare
BWI76_RS21350 -1.5 -2.1 anti-RNA polymerase sigma factor SigE compare
BWI76_RS23885 -1.5 -1.4 2-octaprenylphenol hydroxylase compare
BWI76_RS21475 -1.5 -3.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS08525 -1.4 -2.5 colicin transporter compare
BWI76_RS01275 -1.4 -6.5 LysR family transcriptional regulator compare
BWI76_RS10990 -1.4 -3.2 dihydroorotase compare
BWI76_RS05200 -1.4 -2.6 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS15060 -1.4 -2.1 MarR family transcriptional regulator compare
BWI76_RS27440 -1.3 -3.2 DNA helicase RecG compare
BWI76_RS11965 -1.3 -5.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26390 -1.3 -2.6 cell division protein FtsX compare
BWI76_RS01995 -1.3 -1.6 AraC family transcriptional regulator compare
BWI76_RS08530 -1.3 -2.4 protein TolA compare
BWI76_RS27430 -1.3 -1.3 (p)ppGpp synthetase compare
BWI76_RS17190 -1.3 -2.1 TonB system transport protein TonB compare
BWI76_RS10835 -1.3 -1.7 hypothetical protein compare
BWI76_RS04530 -1.3 -1.5 peptidylprolyl isomerase SurA compare
BWI76_RS25065 -1.3 -2.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS11840 -1.3 -2.5 tryptophan synthase subunit alpha compare
BWI76_RS18065 -1.2 -2.2 DNA polymerase III subunit theta compare
BWI76_RS00970 -1.2 -2.7 branched chain amino acid aminotransferase compare
BWI76_RS26475 -1.2 -4.9 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
BWI76_RS18710 -1.2 -8.4 GGDEF-domain containing protein compare
BWI76_RS08640 -1.2 -2.1 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS00940 -1.2 -5.6 transcriptional regulator HdfR compare
BWI76_RS02995 -1.2 -5.2 aspartate carbamoyltransferase compare
BWI76_RS27305 -1.2 -5.5 glycosyl transferase compare
BWI76_RS21465 -1.1 -3.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11860 -1.1 -5.8 anthranilate synthase component I compare
BWI76_RS09655 -1.1 -3.6 leucine-responsive regulatory protein compare
BWI76_RS17980 -1.1 -1.9 RNA chaperone ProQ compare
BWI76_RS00960 -1.1 -5.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS09970 -1.1 -1.6 porin OmpA compare
BWI76_RS21000 -1.1 -3.5 exopolyphosphatase compare
BWI76_RS11850 -1.1 -5.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS23265 -1.1 -2.2 hypothetical protein compare
BWI76_RS19685 -1.1 -4.9 lysine transporter compare
BWI76_RS26085 -1.0 -1.3 3-dehydroquinate synthase compare
BWI76_RS24825 -1.0 -2.2 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS22755 -1.0 -2.9 phosphoadenosine phosphosulfate reductase compare
BWI76_RS10820 -1.0 -4.0 iron uptake system protein EfeO compare
BWI76_RS24285 -1.0 -4.2 cystathionine beta-lyase compare
BWI76_RS26065 -1.0 -2.5 phosphoglycolate phosphatase compare
BWI76_RS23485 -1.0 -4.8 hypothetical protein compare
BWI76_RS18715 -1.0 -4.6 hypothetical protein compare
BWI76_RS15835 -1.0 -1.0 hypothetical protein compare
BWI76_RS26480 -1.0 -4.8 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS05350 -1.0 -4.9 Rcs stress response system protein RcsF compare
BWI76_RS19805 -1.0 -3.4 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS26395 -1.0 -1.8 cell division protein FtsE compare
BWI76_RS24930 -1.0 -4.7 osmotically-inducible protein OsmY compare
BWI76_RS11610 -0.9 -1.7 glutamate dehydrogenase compare
BWI76_RS05915 -0.9 -2.8 helix-turn-helix transcriptional regulator compare
BWI76_RS02725 -0.9 -1.1 HxlR family transcriptional regulator compare
BWI76_RS21075 -0.9 -1.2 membrane protein compare
BWI76_RS14615 -0.9 -1.3 hypothetical protein compare
BWI76_RS23915 -0.9 -1.6 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS07730 -0.9 -1.4 iron-enterobactin transporter membrane protein compare
BWI76_RS25505 -0.9 -4.8 RNase E specificity factor CsrD compare
BWI76_RS24280 -0.9 -2.0 biopolymer transporter ExbB compare
BWI76_RS12495 -0.9 -1.6 2-Cys peroxiredoxin compare
BWI76_RS11170 -0.9 -1.1 hypothetical protein compare
BWI76_RS11235 -0.9 -1.1 hypothetical protein compare
BWI76_RS00965 -0.9 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS02410 -0.9 -1.1 EF-P beta-lysylation protein EpmB compare
BWI76_RS08380 -0.9 -1.6 endonuclease VIII compare
BWI76_RS11275 -0.9 -3.4 sensor protein PhoQ compare
BWI76_RS20380 -0.9 -1.1 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS14570 -0.9 -3.1 hypothetical protein compare
BWI76_RS06465 -0.9 -1.5 IclR family transcriptional regulator compare
BWI76_RS25425 -0.8 -1.8 arginine repressor compare
BWI76_RS16090 -0.8 -1.5 two-component system response regulator DcuR compare
BWI76_RS07740 -0.8 -1.4 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS13645 -0.8 -2.4 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS06475 -0.8 -1.4 protoheme IX farnesyltransferase compare
BWI76_RS18190 -0.8 -2.1 carboxy-S-adenosyl-L-methionine synthase CmoA compare
BWI76_RS11845 -0.8 -1.6 tryptophan synthase subunit beta compare
BWI76_RS26485 -0.8 -4.9 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
BWI76_RS24275 -0.8 -3.3 biopolymer transport protein ExbD compare
BWI76_RS19215 -0.8 -1.5 proline-specific peptidase compare
BWI76_RS08605 -0.8 -1.8 phosphoglyceromutase compare
BWI76_RS27680 -0.8 -3.4 TetR family transcriptional regulator compare
BWI76_RS11130 -0.8 -4.5 PTS glucose transporter subunit IIBC compare
BWI76_RS20740 -0.8 -3.8 coproporphyrinogen III oxidase compare
BWI76_RS11855 -0.8 -3.3 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS26775 -0.8 -2.2 endo-1,4-D-glucanase compare
BWI76_RS15605 -0.8 -1.9 hypothetical protein compare
BWI76_RS16470 -0.8 -1.4 transcriptional repressor NemR compare
BWI76_RS23930 -0.8 -4.1 transcriptional regulator ArgP compare
BWI76_RS10825 -0.8 -3.5 deferrochelatase/peroxidase EfeB compare
BWI76_RS25645 -0.8 -3.7 shikimate dehydrogenase compare
BWI76_RS06540 -0.8 -1.1 DNA-binding protein HU-beta compare
BWI76_RS24180 -0.8 -1.3 hypothetical protein compare
BWI76_RS04305 -0.8 -0.8 molecular chaperone DnaJ compare
BWI76_RS13775 -0.8 -1.5 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS12345 -0.8 -1.6 nitrite transporter compare
BWI76_RS17780 -0.8 -3.2 septum formation inhibitor compare
BWI76_RS17195 -0.7 -1.9 hypothetical protein compare
BWI76_RS09910 -0.7 -5.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS26465 -0.7 -4.5 4-amino-4-deoxy-L-arabinose lipid A transferase compare
BWI76_RS22485 -0.7 -2.2 hypothetical protein compare
BWI76_RS22760 -0.7 -3.2 sulfite reductase subunit beta compare
BWI76_RS15435 -0.7 -1.1 hypothetical protein compare
BWI76_RS21345 -0.7 -1.2 sigma-E factor regulatory protein RseB compare
BWI76_RS16990 -0.7 -2.7 ABC transporter ATP-binding protein compare
BWI76_RS06530 -0.7 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS04100 -0.7 -2.8 peptide chain release factor 3 compare
BWI76_RS20050 -0.7 -1.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms