Experiment set12IT043 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS23920 -6.1 -7.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18920 -4.4 -4.3 ATP phosphoribosyltransferase compare
BWI76_RS07070 -4.3 -7.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS23240 -4.2 -2.9 exonuclease V subunit gamma compare
BWI76_RS25220 -4.1 -5.7 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS25230 -4.0 -9.4 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS20895 -4.0 -6.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS24400 -4.0 -7.7 outer membrane channel protein TolC compare
BWI76_RS25225 -3.9 -9.6 ABC transporter permease compare
BWI76_RS18140 -3.9 -5.9 zinc ABC transporter permease compare
BWI76_RS04470 -3.9 -14.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS20650 -3.8 -2.6 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS04160 -3.8 -5.1 phosphoserine phosphatase compare
BWI76_RS26085 -3.8 -3.4 3-dehydroquinate synthase compare
BWI76_RS09755 -3.7 -9.9 phosphoserine transaminase compare
BWI76_RS04465 -3.7 -6.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS20475 -3.5 -7.5 phospholipid-binding lipoprotein MlaA compare
BWI76_RS18135 -3.5 -4.6 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS21070 -3.5 -2.4 outer membrane protein assembly factor BamB compare
BWI76_RS23885 -3.4 -2.9 2-octaprenylphenol hydroxylase compare
BWI76_RS21265 -3.2 -14.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS25215 -3.2 -5.2 phospholipid-binding protein MlaC compare
BWI76_RS20355 -3.2 -6.0 colicin V production protein compare
BWI76_RS18950 -3.1 -5.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS01615 -3.0 -11.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00850 -2.9 -9.0 acetylglutamate kinase compare
BWI76_RS01610 -2.9 -9.7 phosphoribosylamine--glycine ligase compare
BWI76_RS09660 -2.9 -1.9 DNA translocase FtsK compare
BWI76_RS04250 -2.9 -10.6 homoserine kinase compare
BWI76_RS04305 -2.8 -1.7 molecular chaperone DnaJ compare
BWI76_RS03010 -2.8 -10.5 ornithine carbamoyltransferase compare
BWI76_RS19845 -2.8 -6.7 phosphatase compare
BWI76_RS20350 -2.8 -6.2 amidophosphoribosyltransferase compare
BWI76_RS00400 -2.8 -2.6 glutamine synthetase compare
BWI76_RS20965 -2.8 -5.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS00990 -2.8 -11.3 ketol-acid reductoisomerase compare
BWI76_RS18940 -2.8 -6.3 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS22755 -2.8 -9.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS07065 -2.7 -6.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00855 -2.7 -8.7 argininosuccinate lyase compare
BWI76_RS04530 -2.7 -2.6 peptidylprolyl isomerase SurA compare
BWI76_RS25115 -2.7 -7.2 argininosuccinate synthase compare
BWI76_RS04645 -2.7 -7.3 3-dehydroquinase compare
BWI76_RS09760 -2.7 -7.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS17720 -2.6 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS05015 -2.6 -2.6 transcriptional regulator compare
BWI76_RS05840 -2.6 -8.1 glutamate 5-kinase compare
BWI76_RS04255 -2.5 -9.1 threonine synthase compare
BWI76_RS23220 -2.5 -6.2 amino-acid N-acetyltransferase compare
BWI76_RS00975 -2.5 -9.8 dihydroxy-acid dehydratase compare
BWI76_RS23365 -2.5 -6.7 LysR family transcriptional regulator compare
BWI76_RS22690 -2.4 -3.6 adenylyl-sulfate kinase compare
BWI76_RS23360 -2.4 -1.7 diaminopimelate decarboxylase compare
BWI76_RS26200 -2.4 -6.7 starch synthase compare
BWI76_RS00845 -2.4 -9.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS21475 -2.3 -6.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS26620 -2.3 -2.0 Fe-S biogenesis protein NfuA compare
BWI76_RS27310 -2.3 -11.7 glycosyltransferase compare
BWI76_RS00805 -2.3 -4.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS10990 -2.3 -3.7 dihydroorotase compare
BWI76_RS18935 -2.3 -6.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS05835 -2.3 -4.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS25425 -2.3 -3.0 arginine repressor compare
BWI76_RS01330 -2.3 -5.2 twin-arginine translocase subunit TatC compare
BWI76_RS22765 -2.3 -8.2 sulfite reductase subunit alpha compare
BWI76_RS18130 -2.2 -5.2 zinc ABC transporter substrate-binding protein compare
BWI76_RS04245 -2.2 -12.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18930 -2.2 -5.1 histidinol-phosphate transaminase compare
BWI76_RS00980 -2.2 -9.6 PLP-dependent threonine dehydratase compare
BWI76_RS00835 -2.2 -12.1 phosphoenolpyruvate carboxylase compare
BWI76_RS17400 -2.2 -1.8 transporter compare
BWI76_RS09645 -2.2 -1.6 thioredoxin-disulfide reductase compare
BWI76_RS11845 -2.1 -5.4 tryptophan synthase subunit beta compare
BWI76_RS11965 -2.1 -3.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18925 -2.1 -5.6 histidinol dehydrogenase compare
BWI76_RS05260 -2.1 -2.8 chaperone compare
BWI76_RS09655 -2.1 -6.6 leucine-responsive regulatory protein compare
BWI76_RS08385 -2.1 -4.3 citrate (Si)-synthase compare
BWI76_RS18955 -2.1 -6.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS22805 -2.1 -8.5 GTP diphosphokinase compare
BWI76_RS11840 -2.1 -3.3 tryptophan synthase subunit alpha compare
BWI76_RS22760 -2.0 -6.1 sulfite reductase subunit beta compare
BWI76_RS02995 -2.0 -6.5 aspartate carbamoyltransferase compare
BWI76_RS23230 -2.0 -4.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS19805 -2.0 -5.1 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS15825 -2.0 -1.5 hypothetical protein compare
BWI76_RS00240 -2.0 -2.8 FMN-binding protein MioC compare
BWI76_RS26570 -2.0 -3.4 anion permease compare
BWI76_RS00345 -2.0 -4.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS02530 -2.0 -2.7 tRNA dimethylallyltransferase compare
BWI76_RS20380 -2.0 -1.9 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS06780 -1.8 -4.4 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS04665 -1.8 -12.5 3-isopropylmalate dehydratase small subunit compare
BWI76_RS07725 -1.7 -1.8 iron-enterobactin transporter permease compare
BWI76_RS06775 -1.7 -9.4 multidrug efflux RND transporter permease subunit compare
BWI76_RS26000 -1.7 -6.6 aspartate aminotransferase family protein compare
BWI76_RS04675 -1.7 -6.7 3-isopropylmalate dehydrogenase compare
BWI76_RS27430 -1.7 -1.6 (p)ppGpp synthetase compare
BWI76_RS01325 -1.7 -2.4 twin-arginine translocase subunit TatB compare
BWI76_RS04670 -1.7 -7.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS08530 -1.6 -2.7 protein TolA compare
BWI76_RS08500 -1.6 -3.2 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS06765 -1.6 -3.2 transcriptional regulator compare
BWI76_RS00355 -1.6 -3.1 DNA polymerase I compare
BWI76_RS18165 -1.6 -2.1 NUDIX pyrophosphatase compare
BWI76_RS20375 -1.6 -2.2 membrane protein compare
BWI76_RS24900 -1.6 -2.3 DeoR family transcriptional regulator compare
BWI76_RS00965 -1.6 -1.5 acetolactate synthase 2 small subunit compare
BWI76_RS20435 -1.6 -1.8 chorismate synthase compare
BWI76_RS09635 -1.5 -1.7 amino acid ABC transporter ATP-binding protein compare
BWI76_RS24285 -1.5 -6.3 cystathionine beta-lyase compare
BWI76_RS04685 -1.5 -8.8 putative leucine operon leader peptide compare
BWI76_RS02735 -1.5 -4.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS04680 -1.5 -8.9 2-isopropylmalate synthase compare
BWI76_RS08495 -1.5 -6.2 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS05140 -1.5 -3.2 Fe3+-hydroxamate ABC transporter permease FhuB conserved
BWI76_RS27680 -1.5 -6.0 TetR family transcriptional regulator compare
BWI76_RS22095 -1.5 -3.5 multidrug export protein EmrA compare
BWI76_RS23480 -1.5 -8.1 EAL domain-containing protein compare
BWI76_RS26480 -1.4 -3.5 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS09650 -1.4 -4.6 hypothetical protein compare
BWI76_RS26665 -1.4 -2.3 DNA-binding response regulator compare
BWI76_RS18065 -1.3 -2.2 DNA polymerase III subunit theta compare
BWI76_RS04240 -1.3 -2.0 thr operon leader peptide compare
BWI76_RS01275 -1.3 -4.6 LysR family transcriptional regulator compare
BWI76_RS11855 -1.3 -5.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS09640 -1.3 -2.4 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS11850 -1.3 -7.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS07475 -1.3 -1.2 DNA-binding transcriptional regulator RamA compare
BWI76_RS25335 -1.3 -2.5 stringent starvation protein A compare
BWI76_RS21675 -1.2 -1.6 hypothetical protein compare
BWI76_RS21000 -1.2 -5.5 exopolyphosphatase compare
BWI76_RS25920 -1.2 -1.9 peptidylprolyl isomerase compare
BWI76_RS01135 -1.2 -4.1 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS15060 -1.2 -2.7 MarR family transcriptional regulator compare
BWI76_RS23930 -1.2 -3.7 transcriptional regulator ArgP compare
BWI76_RS17980 -1.2 -2.8 RNA chaperone ProQ compare
BWI76_RS05135 -1.2 -3.1 iron-hydroxamate transporter substrate-binding subunit compare
BWI76_RS11860 -1.2 -4.7 anthranilate synthase component I compare
BWI76_RS24485 -1.2 -2.1 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS16980 -1.1 -4.2 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS23265 -1.1 -3.1 hypothetical protein compare
BWI76_RS00960 -1.1 -5.9 acetolactate synthase 2 catalytic subunit compare
BWI76_RS26405 -1.1 -1.2 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS17190 -1.1 -2.5 TonB system transport protein TonB compare
BWI76_RS15215 -1.1 -1.2 N-acetyltransferase compare
BWI76_RS26475 -1.1 -6.7 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
BWI76_RS24280 -1.1 -4.9 biopolymer transporter ExbB compare
BWI76_RS19765 -1.1 -4.8 membrane protein compare
BWI76_RS21350 -1.1 -2.3 anti-RNA polymerase sigma factor SigE compare
BWI76_RS25070 -1.1 -1.6 hypothetical protein compare
BWI76_RS07705 -1.1 -2.5 enterochelin esterase compare
BWI76_RS19685 -1.1 -3.1 lysine transporter compare
BWI76_RS01210 -1.1 -1.8 tyrosine recombinase XerC compare
BWI76_RS10480 -1.0 -5.7 amino acid ABC transporter substrate-binding protein compare
BWI76_RS14625 -1.0 -1.3 protein TolA compare
BWI76_RS25645 -1.0 -3.0 shikimate dehydrogenase compare
BWI76_RS21465 -1.0 -3.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS07740 -1.0 -1.7 Fe2+-enterobactin ABC transporter substrate-binding protein compare
BWI76_RS11130 -1.0 -3.8 PTS glucose transporter subunit IIBC compare
BWI76_RS26485 -1.0 -6.0 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
BWI76_RS00785 -1.0 -4.3 cystathionine gamma-synthase compare
BWI76_RS16995 -1.0 -5.6 Fe-S cluster assembly protein SufB compare
BWI76_RS25065 -1.0 -2.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00720 -1.0 -2.5 DNA-binding response regulator compare
BWI76_RS16485 -1.0 -1.6 ribonuclease T compare
BWI76_RS25060 -1.0 -1.8 lipoprotein NlpI compare
BWI76_RS09910 -1.0 -7.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04100 -1.0 -2.5 peptide chain release factor 3 compare
BWI76_RS02815 -1.0 -2.1 fructose-bisphosphatase class I compare
BWI76_RS12950 -1.0 -2.9 acriflavin resistance protein AcrA compare
BWI76_RS27290 -0.9 -5.7 hypothetical protein compare
BWI76_RS03045 -0.9 -1.2 hypothetical protein compare
BWI76_RS27390 -0.9 -3.8 ribonuclease PH compare
BWI76_RS01095 -0.9 -2.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS26670 -0.9 -5.5 two-component sensor histidine kinase compare
BWI76_RS27305 -0.9 -4.5 glycosyl transferase compare
BWI76_RS15845 -0.9 -0.9 hypothetical protein compare
BWI76_RS16975 -0.9 -3.6 cysteine desufuration protein SufE compare
BWI76_RS06770 -0.9 -6.0 Hha toxicity attenuator compare
BWI76_RS24275 -0.9 -3.7 biopolymer transport protein ExbD compare
BWI76_RS17195 -0.9 -2.1 hypothetical protein compare
BWI76_RS06240 -0.9 -3.0 branched-chain amino acid transport system 2 carrier protein BrnQ compare
BWI76_RS05200 -0.9 -1.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS19010 -0.9 -1.8 polysaccharide pyruvyl transferase yvff compare
BWI76_RS01085 -0.9 -3.4 polysaccharide chain length modulation protein compare
BWI76_RS06490 -0.9 -3.5 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS10780 -0.9 -2.6 pyrimidine utilization protein A compare
BWI76_RS16490 -0.9 -1.8 glutaredoxin compare
BWI76_RS24585 -0.9 -1.3 glycerol dehydrogenase compare
BWI76_RS06015 -0.9 -1.6 hypothetical protein compare
BWI76_RS05125 -0.8 -4.0 ferrichrome porin FhuA compare
BWI76_RS25315 -0.8 -5.3 glutamate synthase large subunit compare
BWI76_RS00940 -0.8 -4.3 transcriptional regulator HdfR compare
BWI76_RS05130 -0.8 -4.4 iron-hydroxamate transporter ATP-binding subunit conserved
BWI76_RS24600 -0.8 -3.1 dihydroxyacetone kinase compare
BWI76_RS16470 -0.8 -1.4 transcriptional repressor NemR compare
BWI76_RS24930 -0.8 -3.2 osmotically-inducible protein OsmY compare
BWI76_RS22625 -0.8 -1.8 transcriptional regulator compare
BWI76_RS04770 -0.8 -3.1 D-alanine--D-alanine ligase compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms