Experiment set12IT043 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS20995 +2.2 15.9 RNA degradosome polyphosphate kinase compare
BWI76_RS22120 +2.0 14.5 glutamate--cysteine ligase compare
BWI76_RS07465 +1.9 5.2 TetR family transcriptional regulator compare
BWI76_RS26095 +1.9 3.9 shikimate kinase compare
BWI76_RS27675 +1.7 13.3 EmrB/QacA family drug resistance transporter compare
BWI76_RS00140 +1.5 2.9 phosphate transport system regulator PhoU compare
BWI76_RS24075 +1.5 5.9 glutathione synthase compare
BWI76_RS12170 +1.3 2.2 hypothetical protein compare
BWI76_RS26685 +1.3 8.8 glutathione-disulfide reductase compare
BWI76_RS13095 +1.3 2.6 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS17915 +1.3 8.1 membrane protein compare
BWI76_RS01070 +1.2 7.0 thiol reductase thioredoxin compare
BWI76_RS09730 +1.2 3.0 pyruvate formate lyase 1-activating protein compare
BWI76_RS22090 +1.2 3.8 transcriptional regulator compare
BWI76_RS17080 +1.1 8.1 hypothetical protein compare
BWI76_RS17910 +1.1 7.0 hypothetical protein compare
BWI76_RS22085 +1.1 5.9 L-valine transporter subunit YgaH compare
BWI76_RS14075 +1.0 1.7 TetR family transcriptional regulator compare
BWI76_RS25475 +1.0 7.9 TIGR02099 family protein compare
BWI76_RS21310 +1.0 1.7 DNA repair protein RecO compare
BWI76_RS18335 +0.9 6.1 DNA-binding response regulator compare
BWI76_RS18225 +0.9 3.2 universal stress protein C compare
BWI76_RS01775 +0.9 1.8 hypothetical protein compare
BWI76_RS09100 +0.9 4.4 glutathione ABC transporter substrate-binding protein GsiB compare
BWI76_RS16935 +0.9 1.7 shikimate dehydrogenase compare
BWI76_RS05005 +0.9 3.5 polynucleotide adenylyltransferase compare
BWI76_RS22815 +0.9 7.1 hybrid sensor histidine kinase/response regulator compare
BWI76_RS09520 +0.9 2.2 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS16660 +0.9 3.2 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS24480 +0.9 4.7 undecaprenyl-diphosphatase compare
BWI76_RS16920 +0.8 1.2 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS11155 +0.8 1.6 penicillin-binding protein activator LpoB compare
BWI76_RS13250 +0.8 1.6 cytochrome b561 compare
BWI76_RS19100 +0.8 5.1 putative acid phosphatase compare
BWI76_RS15190 +0.8 2.7 GGDEF domain-containing protein compare
BWI76_RS17805 +0.8 1.6 membrane protein compare
BWI76_RS01900 +0.8 2.3 tRNA-dihydrouridine synthase A compare
BWI76_RS11405 +0.7 4.4 lipid A biosynthesis acyltransferase compare
BWI76_RS20900 +0.7 0.8 outer membrane protein assembly factor BamC compare
BWI76_RS16965 +0.7 2.2 murein lipoprotein compare
BWI76_RS14755 +0.7 2.5 SIS domain-containing protein compare
BWI76_RS16300 +0.7 3.1 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS00865 +0.7 3.3 DNA-binding transcriptional regulator OxyR compare
BWI76_RS08945 +0.7 3.9 catecholate siderophore receptor Fiu compare
BWI76_RS01890 +0.7 4.0 transcriptional regulator Zur compare
BWI76_RS15960 +0.7 3.4 LysR family transcriptional regulator compare
BWI76_RS23015 +0.7 1.7 cobalt transporter ATP-binding subunit compare
BWI76_RS26580 +0.7 3.9 universal stress protein A compare
BWI76_RS06785 +0.7 3.6 DNA-binding transcriptional repressor AcrR compare
BWI76_RS25980 +0.7 2.6 hypothetical protein compare
BWI76_RS09110 +0.7 1.3 glutathione ABC transporter permease GsiD compare
BWI76_RS10540 +0.7 3.3 allantoinase compare
BWI76_RS14670 +0.7 1.9 hypothetical protein compare
BWI76_RS26045 +0.7 1.8 nitrite reductase small subunit compare
BWI76_RS12470 +0.7 1.6 thiosulfate sulfurtransferase PspE compare
BWI76_RS06520 +0.7 3.6 trigger factor compare
BWI76_RS06590 +0.7 5.0 multidrug ABC transporter permease/ATP-binding protein compare
BWI76_RS26805 +0.6 1.9 cellulose biosynthesis protein BcsF compare
BWI76_RS00640 +0.6 2.6 L-rhamnose mutarotase compare
BWI76_RS19885 +0.6 3.3 multidrug ABC transporter permease/ATP-binding protein conserved
BWI76_RS12235 +0.6 1.0 hypothetical protein compare
BWI76_RS08350 +0.6 1.6 carboxylase compare
BWI76_RS06540 +0.6 1.5 DNA-binding protein HU-beta compare
BWI76_RS16795 +0.6 1.5 amino acid ABC transporter ATPase compare
BWI76_RS03800 +0.6 1.8 hypothetical protein compare
BWI76_RS15980 +0.6 1.9 lysine transporter LysE compare
BWI76_RS06200 +0.6 2.1 hypothetical protein compare
BWI76_RS19375 +0.6 1.4 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS12985 +0.6 1.5 transcriptional regulator compare
BWI76_RS10305 +0.6 3.9 transposase compare
BWI76_RS04715 +0.6 1.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS02605 +0.6 3.3 esterase compare
BWI76_RS13175 +0.6 1.5 NodT family RND efflux system outer membrane lipoprotein compare
BWI76_RS12780 +0.6 1.9 hypothetical protein compare
BWI76_RS13820 +0.6 1.7 hypothetical protein compare
BWI76_RS13785 +0.6 1.3 ABC transporter permease compare
BWI76_RS11190 +0.6 1.7 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS26335 +0.6 3.1 ABC transporter ATP-binding protein compare
BWI76_RS23300 +0.6 3.8 YgdI/YgdR family lipoprotein compare
BWI76_RS26175 +0.6 2.2 DeoR/GlpR family transcriptional regulator compare
BWI76_RS16315 +0.6 0.7 SirA-like protein compare
BWI76_RS11920 +0.6 1.4 hypothetical protein compare
BWI76_RS26125 +0.6 3.6 carboxypeptidase/penicillin-binding protein 1A compare
BWI76_RS16760 +0.6 2.0 lipase compare
BWI76_RS26750 +0.6 2.7 PfkB domain-containing protein compare
BWI76_RS09310 +0.6 2.7 hypothetical protein compare
BWI76_RS23555 +0.6 2.3 type 1 major fimbrial subunit precursor compare
BWI76_RS11820 +0.6 1.1 short-chain dehydrogenase/reductase SDR compare
BWI76_RS15210 +0.5 1.7 LysR family transcriptional regulator compare
BWI76_RS06370 +0.5 3.3 phosphatidylglycerophosphatase A compare
BWI76_RS22700 +0.5 1.7 sulfate adenylyltransferase subunit 2 compare
BWI76_RS16200 +0.5 1.4 NAD(P) transhydrogenase subunit beta compare
BWI76_RS08375 +0.5 2.0 pyroglutamyl-peptidase I compare
BWI76_RS18125 +0.5 2.2 murein DD-endopeptidase MepM compare
BWI76_RS21235 +0.5 1.0 hypothetical protein compare
BWI76_RS00715 +0.5 1.6 two-component sensor histidine kinase compare
BWI76_RS09290 +0.5 1.2 phage Tail Protein X compare
BWI76_RS07255 +0.5 1.8 hypothetical protein compare
BWI76_RS16150 +0.5 1.5 IclR family transcriptional regulator compare
BWI76_RS06235 +0.5 1.6 PAS domain-containing sensor histidine kinase compare
BWI76_RS17110 +0.5 1.1 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS16335 +0.5 1.2 division septum protein Blr compare
BWI76_RS04815 +0.5 1.9 cell division protein ZapD compare
BWI76_RS16355 +0.5 1.4 electron transport complex subunit A compare
BWI76_RS18230 +0.5 2.0 trehalose-6-phosphate synthase compare
BWI76_RS09860 +0.5 2.3 hypothetical protein compare
BWI76_RS04900 +0.5 1.3 DUF2950 domain-containing protein compare
BWI76_RS19905 +0.5 2.6 OmpK36 porin compare
BWI76_RS15045 +0.5 1.8 LysR family transcriptional regulator compare
BWI76_RS18375 +0.5 2.6 hypothetical protein compare
BWI76_RS11525 +0.5 1.2 HNH endonuclease compare
BWI76_RS06405 +0.5 1.7 2-dehydropantoate 2-reductase compare
BWI76_RS18540 +0.5 2.6 signal transduction protein PmrD compare
BWI76_RS17085 +0.5 2.3 hypothetical protein compare
BWI76_RS09540 +0.5 1.2 hypothetical protein compare
BWI76_RS20730 +0.5 1.1 hypothetical protein compare
BWI76_RS15635 +0.5 1.2 hypothetical protein compare
BWI76_RS22470 +0.5 1.4 transporter permease compare
BWI76_RS11665 +0.5 1.9 exodeoxyribonuclease III compare
BWI76_RS25910 +0.5 2.5 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS11265 +0.5 1.5 peptidase T compare
BWI76_RS14325 +0.5 1.8 maturase compare
BWI76_RS15095 +0.5 2.2 isochorismatase compare
BWI76_RS23340 +0.5 1.4 transcriptional regulator compare
BWI76_RS03025 +0.5 1.5 N-acetyltransferase compare
BWI76_RS16210 +0.5 0.5 hypothetical protein compare
BWI76_RS19325 +0.5 1.4 mandelate racemase compare
BWI76_RS07510 +0.5 1.1 hypothetical protein compare
BWI76_RS24080 +0.5 1.2 DUF179 domain-containing protein compare
BWI76_RS14435 +0.5 0.9 glutamine ABC transporter ATP-binding protein compare
BWI76_RS10945 +0.5 1.5 SecY/SecA suppressor protein compare
BWI76_RS13245 +0.5 1.5 DNA-damage-inducible protein I compare
BWI76_RS19775 +0.5 1.7 phage resistance protein compare
BWI76_RS27625 +0.5 2.1 NADPH:quinone reductase compare
BWI76_RS21380 +0.5 2.0 uracil-DNA glycosylase compare
BWI76_RS06910 +0.5 1.0 transcriptional regulator compare
BWI76_RS09360 +0.5 1.6 hypothetical protein compare
BWI76_RS07385 +0.5 1.1 short-chain dehydrogenase/reductase SDR compare
BWI76_RS05880 +0.5 1.3 AraC-type DNA-binding domain-containing protein compare
BWI76_RS07640 +0.5 0.9 short chain dehydrogenase compare
BWI76_RS02560 +0.5 2.2 membrane protein compare
BWI76_RS13660 +0.5 1.4 nitrate reductase subunit beta compare
BWI76_RS05885 +0.5 2.3 anion permease compare
BWI76_RS21505 +0.5 0.8 hypothetical protein compare
BWI76_RS19590 +0.5 2.1 MFS transporter compare
BWI76_RS16035 +0.4 1.4 biotin-independent malonate decarboxylase subunit beta compare
BWI76_RS17820 +0.4 1.7 hypothetical protein compare
BWI76_RS12070 +0.4 0.7 hypothetical protein compare
BWI76_RS07350 +0.4 1.5 alcohol dehydrogenase compare
BWI76_RS19860 +0.4 1.6 hypothetical protein compare
BWI76_RS02220 +0.4 2.0 carbon-phosphorus lyase subunit PhnH compare
BWI76_RS02090 +0.4 1.4 membrane protein compare
BWI76_RS22840 +0.4 1.2 transposase compare
BWI76_RS07650 +0.4 2.7 ABC transporter permease compare
BWI76_RS03760 +0.4 2.3 hypothetical protein compare
BWI76_RS09095 +0.4 2.9 glutathione ABC transporter ATP-binding protein GsiA compare
BWI76_RS16970 +0.4 2.0 murein L,D-transpeptidase compare
BWI76_RS14135 +0.4 2.5 malto-oligosyltrehalose synthase compare
BWI76_RS18810 +0.4 1.9 nitrogenase iron protein compare
BWI76_RS13515 +0.4 1.8 amino acid permease compare
BWI76_RS01285 +0.4 2.7 amino acid ABC transporter substrate-binding protein compare
BWI76_RS17795 +0.4 0.9 ribonuclease D compare
BWI76_RS16575 +0.4 2.0 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS23040 +0.4 2.0 sirohydrochlorin cobaltochelatase compare
BWI76_RS06175 +0.4 1.9 DUF188 domain-containing protein compare
BWI76_RS08795 +0.4 2.7 DNA-binding response regulator compare
BWI76_RS17930 +0.4 2.2 cold-shock protein CspC compare
BWI76_RS08965 +0.4 1.5 glutamine ABC transporter ATP-binding protein compare
BWI76_RS04110 +0.4 2.8 DUF1328 domain-containing protein compare
BWI76_RS04270 +0.4 2.3 transaldolase compare
BWI76_RS23140 +0.4 1.3 carboxysome shell protein compare
BWI76_RS25245 +0.4 0.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS00285 +0.4 1.8 D-ribose ABC transporter substrate-binding protein compare
BWI76_RS09250 +0.4 1.7 hypothetical protein compare
BWI76_RS25270 +0.4 1.6 ribosome hibernation promoting factor compare
BWI76_RS00060 +0.4 0.9 N-acetylneuraminate lyase compare
BWI76_RS01605 +0.4 2.9 transcriptional regulatory protein ZraR compare
BWI76_RS09035 +0.4 1.6 protein tyrosine/serine phosphatase compare
BWI76_RS24770 +0.4 0.6 hypothetical protein compare
BWI76_RS13030 +0.4 1.3 site-specific recombinase, phage integrase family protein compare
BWI76_RS07500 +0.4 1.4 RND transporter MFP subunit compare
BWI76_RS09105 +0.4 2.6 glutathione ABC transporter permease GsiC compare
BWI76_RS26495 +0.4 2.8 LysR family transcriptional regulator compare
BWI76_RS24250 +0.4 1.8 hypothetical protein compare
BWI76_RS23505 +0.4 3.6 ferrous iron transporter B compare
BWI76_RS06585 +0.4 2.0 multidrug ABC transporter permease/ATP-binding protein compare
BWI76_RS04060 +0.4 0.9 hypothetical protein compare
BWI76_RS23190 +0.4 2.0 propanediol utilization protein PduU compare
BWI76_RS13930 +0.4 1.9 putative LysR-family transcriptional regulator compare
BWI76_RS13130 +0.4 1.3 phenylacetic acid degradation protein PaaD compare
BWI76_RS13025 +0.4 1.2 histidine phosphatase family protein compare
BWI76_RS15735 +0.4 1.4 hypothetical protein compare
BWI76_RS16360 +0.4 0.8 electron transport complex subunit RsxB compare
BWI76_RS14170 +0.4 1.5 hypothetical protein compare
BWI76_RS07695 +0.4 3.0 TonB-dependent siderophore receptor compare
BWI76_RS21810 +0.4 1.0 universal stress protein compare
BWI76_RS16690 +0.4 1.3 peptide ABC transporter permease compare
BWI76_RS11825 +0.4 2.1 LysR family transcriptional regulator compare
BWI76_RS11240 +0.4 1.8 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
BWI76_RS23630 +0.4 2.2 acetoin(diacetyl) reductase compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms