Experiment set12IT040 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -5.6 -4.1 colicin V production protein compare
BWI76_RS26085 -5.4 -3.7 3-dehydroquinate synthase compare
BWI76_RS23920 -5.3 -8.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09755 -4.6 -11.4 phosphoserine transaminase compare
BWI76_RS23360 -4.4 -6.0 diaminopimelate decarboxylase compare
BWI76_RS17720 -4.4 -2.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04160 -4.3 -9.1 phosphoserine phosphatase compare
BWI76_RS04470 -4.2 -10.3 carbamoyl phosphate synthase large subunit compare
BWI76_RS20965 -3.9 -7.1 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS10990 -3.8 -5.7 dihydroorotase compare
BWI76_RS21265 -3.7 -14.5 phosphoribosylformylglycinamidine synthase compare
BWI76_RS20435 -3.7 -2.3 chorismate synthase compare
BWI76_RS01610 -3.7 -7.6 phosphoribosylamine--glycine ligase compare
BWI76_RS01615 -3.5 -10.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS00855 -3.4 -8.8 argininosuccinate lyase compare
BWI76_RS20350 -3.4 -10.4 amidophosphoribosyltransferase compare
BWI76_RS23365 -3.2 -6.7 LysR family transcriptional regulator compare
BWI76_RS20895 -3.2 -5.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS05840 -3.2 -5.9 glutamate 5-kinase compare
BWI76_RS11965 -3.2 -5.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS07070 -3.1 -4.5 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS08385 -3.1 -5.9 citrate (Si)-synthase compare
BWI76_RS25115 -3.1 -10.1 argininosuccinate synthase compare
BWI76_RS09645 -3.1 -2.0 thioredoxin-disulfide reductase compare
BWI76_RS00835 -3.1 -14.2 phosphoenolpyruvate carboxylase compare
BWI76_RS04465 -3.1 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS09760 -3.1 -5.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09910 -3.0 -16.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS18935 -3.0 -8.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS22755 -3.0 -9.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS00850 -3.0 -12.9 acetylglutamate kinase compare
BWI76_RS01210 -2.9 -3.1 tyrosine recombinase XerC compare
BWI76_RS23220 -2.9 -10.1 amino-acid N-acetyltransferase compare
BWI76_RS22765 -2.9 -9.7 sulfite reductase subunit alpha compare
BWI76_RS04250 -2.8 -8.0 homoserine kinase compare
BWI76_RS00975 -2.8 -9.1 dihydroxy-acid dehydratase compare
BWI76_RS23240 -2.8 -4.5 exonuclease V subunit gamma compare
BWI76_RS00845 -2.7 -10.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS07065 -2.7 -10.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20650 -2.7 -3.6 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS00990 -2.7 -10.0 ketol-acid reductoisomerase compare
BWI76_RS18940 -2.7 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS00400 -2.7 -2.0 glutamine synthetase compare
BWI76_RS18950 -2.7 -7.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS03010 -2.6 -8.0 ornithine carbamoyltransferase compare
BWI76_RS04255 -2.6 -9.3 threonine synthase compare
BWI76_RS21475 -2.6 -6.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18930 -2.5 -8.1 histidinol-phosphate transaminase compare
BWI76_RS02995 -2.5 -8.5 aspartate carbamoyltransferase compare
BWI76_RS09660 -2.5 -2.3 DNA translocase FtsK compare
BWI76_RS04245 -2.5 -14.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00980 -2.4 -11.9 PLP-dependent threonine dehydratase compare
BWI76_RS21140 -2.4 -2.9 molecular chaperone HscA compare
BWI76_RS04240 -2.4 -4.4 thr operon leader peptide compare
BWI76_RS27385 -2.4 -9.3 orotate phosphoribosyltransferase compare
BWI76_RS27390 -2.4 -3.1 ribonuclease PH compare
BWI76_RS22760 -2.3 -6.3 sulfite reductase subunit beta compare
BWI76_RS23895 -2.3 -2.9 Xaa-Pro aminopeptidase compare
BWI76_RS02735 -2.2 -4.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS04645 -2.2 -5.3 3-dehydroquinase compare
BWI76_RS04675 -2.1 -6.0 3-isopropylmalate dehydrogenase compare
BWI76_RS04665 -2.1 -15.1 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04670 -2.0 -9.6 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04680 -2.0 -12.0 2-isopropylmalate synthase compare
BWI76_RS18920 -2.0 -3.6 ATP phosphoribosyltransferase compare
BWI76_RS04685 -2.0 -11.3 putative leucine operon leader peptide compare
BWI76_RS22690 -2.0 -3.0 adenylyl-sulfate kinase compare
BWI76_RS05200 -2.0 -3.7 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS11845 -1.9 -3.2 tryptophan synthase subunit beta compare
BWI76_RS26570 -1.9 -4.4 anion permease compare
BWI76_RS23480 -1.9 -9.1 EAL domain-containing protein compare
BWI76_RS23230 -1.9 -3.7 exodeoxyribonuclease V subunit beta compare
BWI76_RS00805 -1.9 -5.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS05835 -1.9 -3.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS18770 -1.8 -2.0 DNA gyrase inhibitor compare
BWI76_RS00180 -1.8 -2.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS22805 -1.7 -7.5 GTP diphosphokinase compare
BWI76_RS24285 -1.7 -5.9 cystathionine beta-lyase compare
BWI76_RS25320 -1.7 -6.4 glutamate synthase compare
BWI76_RS18955 -1.7 -3.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS03665 -1.7 -2.2 ABC transporter ATP-binding protein compare
BWI76_RS21465 -1.7 -6.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS18925 -1.7 -6.5 histidinol dehydrogenase compare
BWI76_RS11850 -1.6 -9.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11860 -1.6 -5.7 anthranilate synthase component I compare
BWI76_RS27430 -1.5 -1.6 (p)ppGpp synthetase compare
BWI76_RS15825 -1.5 -1.3 hypothetical protein compare
BWI76_RS00390 -1.5 -4.8 two-component system sensor histidine kinase NtrB compare
BWI76_RS25645 -1.5 -5.4 shikimate dehydrogenase compare
BWI76_RS15215 -1.5 -1.6 N-acetyltransferase compare
BWI76_RS11840 -1.4 -3.3 tryptophan synthase subunit alpha compare
BWI76_RS08520 -1.4 -2.0 colicin transporter TolQ compare
BWI76_RS23265 -1.4 -3.9 hypothetical protein compare
BWI76_RS01800 -1.4 -4.6 glucose-6-phosphate isomerase compare
BWI76_RS02530 -1.3 -1.9 tRNA dimethylallyltransferase compare
BWI76_RS00785 -1.3 -3.8 cystathionine gamma-synthase compare
BWI76_RS04305 -1.3 -1.2 molecular chaperone DnaJ compare
BWI76_RS00385 -1.3 -7.6 nitrogen assimilation regulatory protein compare
BWI76_RS01655 -1.3 -7.5 homoserine O-succinyltransferase compare
BWI76_RS26620 -1.2 -1.5 Fe-S biogenesis protein NfuA compare
BWI76_RS25870 -1.2 -2.1 elongation factor Tu compare
BWI76_RS05235 -1.2 -1.4 hypothetical protein compare
BWI76_RS20440 -1.2 -1.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS26000 -1.2 -4.9 aspartate aminotransferase family protein compare
BWI76_RS16485 -1.2 -1.3 ribonuclease T compare
BWI76_RS25315 -1.1 -7.7 glutamate synthase large subunit compare
BWI76_RS04715 -1.1 -1.5 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS11855 -1.1 -5.6 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS25505 -1.1 -7.1 RNase E specificity factor CsrD compare
BWI76_RS02410 -1.1 -1.2 EF-P beta-lysylation protein EpmB compare
BWI76_RS04530 -1.1 -1.8 peptidylprolyl isomerase SurA compare
BWI76_RS17975 -1.1 -2.9 tail-specific protease compare
BWI76_RS21580 -1.1 -1.3 SsrA-binding protein compare
BWI76_RS00355 -1.1 -2.1 DNA polymerase I compare
BWI76_RS26075 -1.1 -3.4 DNA adenine methylase compare
BWI76_RS06765 -1.0 -2.3 transcriptional regulator compare
BWI76_RS08380 -1.0 -1.8 endonuclease VIII compare
BWI76_RS17195 -1.0 -2.6 hypothetical protein compare
BWI76_RS01385 -1.0 -2.2 potassium transporter compare
BWI76_RS08535 -1.0 -1.6 translocation protein TolB compare
BWI76_RS01185 -1.0 -1.8 adenylate cyclase compare
BWI76_RS00345 -1.0 -3.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS12495 -1.0 -1.9 2-Cys peroxiredoxin compare
BWI76_RS18870 -1.0 -1.5 protein NifZ compare
BWI76_RS25335 -1.0 -2.5 stringent starvation protein A compare
BWI76_RS04515 -1.0 -1.6 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS10745 -1.0 -1.2 hypothetical protein compare
BWI76_RS04510 -0.9 -1.8 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS11300 -0.9 -1.2 cupin compare
BWI76_RS24390 -0.9 -1.9 hypothetical protein compare
BWI76_RS11515 -0.9 -1.4 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS15835 -0.9 -1.0 hypothetical protein compare
BWI76_RS26460 -0.9 -2.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26095 -0.9 -1.3 shikimate kinase compare
BWI76_RS08525 -0.9 -2.6 colicin transporter compare
BWI76_RS15680 -0.9 -3.1 hypothetical protein compare
BWI76_RS17805 -0.9 -1.3 membrane protein compare
BWI76_RS00985 -0.9 -3.9 transcriptional regulator IlvY compare
BWI76_RS24885 -0.9 -1.6 PTS galactitol transporter subunit IIB compare
BWI76_RS21480 -0.9 -3.7 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS20970 -0.9 -1.6 phosphoribosylglycinamide formyltransferase compare
BWI76_RS01275 -0.9 -3.8 LysR family transcriptional regulator compare
BWI76_RS26455 -0.9 -3.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS27165 -0.9 -2.9 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS26055 -0.9 -4.3 siroheme synthase compare
BWI76_RS19685 -0.9 -2.8 lysine transporter compare
BWI76_RS25065 -0.8 -2.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS16235 -0.8 -3.5 membrane protein compare
BWI76_RS19870 -0.8 -1.9 malate:quinone oxidoreductase compare
BWI76_RS26390 -0.8 -2.9 cell division protein FtsX compare
BWI76_RS24400 -0.8 -3.8 outer membrane channel protein TolC compare
BWI76_RS08665 -0.8 -4.4 6-phosphogluconolactonase compare
BWI76_RS05070 -0.8 -1.2 type II secretion system protein GspH compare
BWI76_RS19495 -0.8 -1.2 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS26200 -0.8 -2.4 starch synthase compare
BWI76_RS18065 -0.8 -1.7 DNA polymerase III subunit theta compare
BWI76_RS08530 -0.8 -1.1 protein TolA compare
BWI76_RS14805 -0.8 -2.7 hypothetical protein compare
BWI76_RS00240 -0.8 -1.7 FMN-binding protein MioC compare
BWI76_RS19850 -0.8 -2.3 tRNA-Pro compare
BWI76_RS09655 -0.8 -2.8 leucine-responsive regulatory protein compare
BWI76_RS13470 -0.8 -2.0 transporter compare
BWI76_RS24635 -0.8 -2.1 autoinducer-2 (AI-2) modifying protein LsrG compare
BWI76_RS07465 -0.8 -1.5 TetR family transcriptional regulator compare
BWI76_RS24930 -0.7 -2.6 osmotically-inducible protein OsmY compare
BWI76_RS16590 -0.7 -2.0 short-chain dehydrogenase compare
BWI76_RS25070 -0.7 -1.3 hypothetical protein compare
BWI76_RS01580 -0.7 -1.5 hypothetical protein compare
BWI76_RS02725 -0.7 -0.9 HxlR family transcriptional regulator compare
BWI76_RS25225 -0.7 -2.6 ABC transporter permease compare
BWI76_RS23970 -0.7 -1.5 mechanosensitive ion channel protein MscS compare
BWI76_RS14670 -0.7 -1.7 hypothetical protein compare
BWI76_RS01280 -0.7 -5.3 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS00960 -0.7 -3.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS15920 -0.7 -1.3 hypothetical protein compare
BWI76_RS17980 -0.7 -2.9 RNA chaperone ProQ compare
BWI76_RS06770 -0.7 -5.0 Hha toxicity attenuator compare
BWI76_RS26395 -0.7 -2.4 cell division protein FtsE compare
BWI76_RS18430 -0.7 -1.7 hypothetical protein compare
BWI76_RS22695 -0.7 -3.1 sulfate adenylyltransferase compare
BWI76_RS26775 -0.7 -2.3 endo-1,4-D-glucanase compare
BWI76_RS16360 -0.7 -1.1 electron transport complex subunit RsxB compare
BWI76_RS12045 -0.7 -1.9 hypothetical protein compare
BWI76_RS13955 -0.7 -1.9 hypothetical protein compare
BWI76_RS18715 -0.7 -4.0 hypothetical protein compare
BWI76_RS21810 -0.7 -1.0 universal stress protein compare
BWI76_RS15360 -0.7 -1.9 hypothetical protein compare
BWI76_RS17860 -0.7 -1.6 YoaH family protein compare
BWI76_RS18165 -0.6 -1.0 NUDIX pyrophosphatase compare
BWI76_RS26405 -0.6 -1.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS20380 -0.6 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS14300 -0.6 -2.1 hypothetical protein compare
BWI76_RS00720 -0.6 -1.4 DNA-binding response regulator compare
BWI76_RS25060 -0.6 -2.1 lipoprotein NlpI compare
BWI76_RS24120 -0.6 -2.9 YggW family oxidoreductase compare
BWI76_RS17665 -0.6 -1.2 proteasome-type protease compare
BWI76_RS18140 -0.6 -2.6 zinc ABC transporter permease compare
BWI76_RS05915 -0.6 -2.1 helix-turn-helix transcriptional regulator compare
BWI76_RS19025 -0.6 -4.4 phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating) compare
BWI76_RS10580 -0.6 -2.0 amino acid ABC transporter permease compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms