Experiment set12IT038 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26085 -5.3 -3.7 3-dehydroquinate synthase compare
BWI76_RS00400 -4.9 -3.4 glutamine synthetase compare
BWI76_RS09660 -3.2 -2.1 DNA translocase FtsK compare
BWI76_RS17720 -3.0 -1.7 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS02530 -2.9 -3.4 tRNA dimethylallyltransferase compare
BWI76_RS05200 -2.8 -4.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS04160 -2.6 -6.2 phosphoserine phosphatase compare
BWI76_RS23230 -2.6 -4.3 exodeoxyribonuclease V subunit beta compare
BWI76_RS23240 -2.2 -4.3 exonuclease V subunit gamma compare
BWI76_RS09755 -2.1 -9.6 phosphoserine transaminase compare
BWI76_RS20650 -1.9 -3.5 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS23920 -1.9 -7.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS00390 -1.9 -6.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS10990 -1.8 -2.4 dihydroorotase compare
BWI76_RS23480 -1.8 -9.2 EAL domain-containing protein compare
BWI76_RS04465 -1.8 -3.8 carbamoyl-phosphate synthase small subunit compare
BWI76_RS26455 -1.8 -4.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS21580 -1.7 -1.9 SsrA-binding protein compare
BWI76_RS25600 -1.7 -1.5 tRNA-Thr compare
BWI76_RS25335 -1.7 -2.0 stringent starvation protein A compare
BWI76_RS01210 -1.7 -2.0 tyrosine recombinase XerC compare
BWI76_RS19685 -1.6 -7.2 lysine transporter compare
BWI76_RS04470 -1.6 -7.4 carbamoyl phosphate synthase large subunit compare
BWI76_RS11235 -1.6 -1.7 hypothetical protein compare
BWI76_RS01200 -1.5 -2.0 diaminopimelate epimerase compare
BWI76_RS27425 -1.5 -2.7 DNA-directed RNA polymerase subunit omega compare
BWI76_RS25160 -1.5 -2.4 transcription elongation factor GreA compare
BWI76_RS06765 -1.5 -2.3 transcriptional regulator compare
BWI76_RS26460 -1.4 -4.2 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS08520 -1.4 -1.9 colicin transporter TolQ compare
BWI76_RS26570 -1.4 -3.0 anion permease compare
BWI76_RS17975 -1.3 -2.6 tail-specific protease compare
BWI76_RS06770 -1.3 -8.3 Hha toxicity attenuator compare
BWI76_RS26395 -1.3 -2.4 cell division protein FtsE compare
BWI76_RS23265 -1.3 -3.5 hypothetical protein compare
BWI76_RS19840 -1.2 -1.6 hypothetical protein compare
BWI76_RS22690 -1.2 -3.6 adenylyl-sulfate kinase compare
BWI76_RS20380 -1.2 -1.4 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS26390 -1.2 -3.2 cell division protein FtsX compare
BWI76_RS00385 -1.2 -6.4 nitrogen assimilation regulatory protein compare
BWI76_RS05260 -1.2 -2.1 chaperone compare
BWI76_RS09645 -1.1 -1.2 thioredoxin-disulfide reductase compare
BWI76_RS02995 -1.1 -4.5 aspartate carbamoyltransferase compare
BWI76_RS20895 -1.1 -5.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00345 -1.1 -2.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS24075 -1.1 -3.9 glutathione synthase compare
BWI76_RS22755 -1.1 -3.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS04305 -1.1 -1.0 molecular chaperone DnaJ compare
BWI76_RS17980 -1.1 -3.7 RNA chaperone ProQ compare
BWI76_RS14320 -1.1 -1.6 hypothetical protein compare
BWI76_RS04510 -1.1 -1.4 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
BWI76_RS20435 -1.1 -1.5 chorismate synthase compare
BWI76_RS04530 -1.1 -1.3 peptidylprolyl isomerase SurA compare
BWI76_RS00855 -1.0 -5.8 argininosuccinate lyase compare
BWI76_RS27780 -1.0 -2.8 hypothetical protein compare
BWI76_RS01615 -1.0 -4.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS12550 -1.0 -2.7 hypothetical protein compare
BWI76_RS26775 -1.0 -3.3 endo-1,4-D-glucanase compare
BWI76_RS18950 -1.0 -4.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS01885 -1.0 -1.3 CsbD family protein compare
BWI76_RS25425 -1.0 -1.6 arginine repressor compare
BWI76_RS22760 -1.0 -4.4 sulfite reductase subunit beta compare
BWI76_RS14050 -1.0 -2.7 AP endonuclease, family 2 compare
BWI76_RS20355 -1.0 -2.6 colicin V production protein compare
BWI76_RS13590 -1.0 -2.0 hypothetical protein compare
BWI76_RS26075 -1.0 -3.4 DNA adenine methylase compare
BWI76_RS13820 -1.0 -2.2 hypothetical protein compare
BWI76_RS27385 -1.0 -4.3 orotate phosphoribosyltransferase compare
BWI76_RS00180 -1.0 -1.2 F0F1 ATP synthase subunit epsilon compare
BWI76_RS16485 -1.0 -1.9 ribonuclease T compare
BWI76_RS22765 -1.0 -4.4 sulfite reductase subunit alpha compare
BWI76_RS18385 -1.0 -1.3 hypothetical protein compare
BWI76_RS11515 -1.0 -1.7 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS23885 -1.0 -1.6 2-octaprenylphenol hydroxylase compare
BWI76_RS25505 -0.9 -5.0 RNase E specificity factor CsrD compare
BWI76_RS24120 -0.9 -4.2 YggW family oxidoreductase compare
BWI76_RS01610 -0.9 -5.0 phosphoribosylamine--glycine ligase compare
BWI76_RS23220 -0.9 -4.7 amino-acid N-acetyltransferase compare
BWI76_RS22935 -0.9 -1.8 L-fucose mutarotase compare
BWI76_RS01330 -0.9 -1.8 twin-arginine translocase subunit TatC compare
BWI76_RS12145 -0.9 -1.3 hypothetical protein compare
BWI76_RS13050 -0.9 -1.9 transcriptional regulator compare
BWI76_RS08380 -0.9 -1.4 endonuclease VIII compare
BWI76_RS01540 -0.9 -1.0 thiamine biosynthesis protein ThiS compare
BWI76_RS17945 -0.9 -1.5 hypothetical protein compare
BWI76_RS12855 -0.9 -1.7 enamine deaminase RidA compare
BWI76_RS11300 -0.8 -1.1 cupin compare
BWI76_RS03010 -0.8 -5.3 ornithine carbamoyltransferase compare
BWI76_RS07070 -0.8 -3.2 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS16965 -0.8 -1.8 murein lipoprotein compare
BWI76_RS23485 -0.8 -4.8 hypothetical protein compare
BWI76_RS09760 -0.8 -4.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23365 -0.8 -1.5 LysR family transcriptional regulator compare
BWI76_RS21265 -0.8 -5.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS13785 -0.8 -1.9 ABC transporter permease compare
BWI76_RS09910 -0.8 -6.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS18710 -0.8 -6.0 GGDEF-domain containing protein compare
BWI76_RS07065 -0.8 -4.3 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS20350 -0.8 -3.7 amidophosphoribosyltransferase compare
BWI76_RS07640 -0.8 -1.8 short chain dehydrogenase compare
BWI76_RS12155 -0.8 -2.5 hypothetical protein compare
BWI76_RS25070 -0.8 -1.2 hypothetical protein compare
BWI76_RS26635 -0.8 -1.8 hypothetical protein compare
BWI76_RS00845 -0.8 -3.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04250 -0.8 -3.0 homoserine kinase compare
BWI76_RS05010 -0.8 -2.6 tRNA glutamyl-Q synthetase compare
BWI76_RS24580 -0.8 -3.5 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS09335 -0.8 -1.1 baseplate assembly protein W compare
BWI76_RS08530 -0.8 -1.7 protein TolA compare
BWI76_RS27875 -0.8 -0.8 membrane protein compare
BWI76_RS00875 -0.8 -3.8 DNA-binding transcriptional regulator FabR compare
BWI76_RS07380 -0.8 -2.1 hypothetical protein compare
BWI76_RS08230 -0.7 -3.2 hypothetical protein compare
BWI76_RS24025 -0.7 -3.8 agmatinase compare
BWI76_RS25870 -0.7 -1.3 elongation factor Tu compare
BWI76_RS03665 -0.7 -1.2 ABC transporter ATP-binding protein compare
BWI76_RS25315 -0.7 -4.5 glutamate synthase large subunit compare
BWI76_RS11700 -0.7 -1.0 hypothetical protein compare
BWI76_RS25065 -0.7 -1.6 polyribonucleotide nucleotidyltransferase compare
BWI76_RS11965 -0.7 -2.9 orotidine-5'-phosphate decarboxylase compare
BWI76_RS21690 -0.7 -0.9 hypothetical protein compare
BWI76_RS14770 -0.7 -1.2 PTS IIA 2 domain protein compare
BWI76_RS04140 -0.7 -2.8 phosphopentomutase compare
BWI76_RS12090 -0.7 -1.8 HNH endonuclease compare
BWI76_RS22135 -0.7 -2.2 transport-associated protein compare
BWI76_RS11410 -0.7 -1.6 leucine efflux protein compare
BWI76_RS01100 -0.7 -3.0 dTDP-glucose 4,6-dehydratase compare
BWI76_RS02735 -0.7 -2.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS17525 -0.7 -1.7 XshC-Cox1-family protein compare
BWI76_RS26055 -0.7 -3.3 siroheme synthase compare
BWI76_RS06540 -0.7 -1.3 DNA-binding protein HU-beta compare
BWI76_RS19845 -0.7 -3.2 phosphatase compare
BWI76_RS27390 -0.7 -2.3 ribonuclease PH compare
BWI76_RS22645 -0.7 -1.9 RNA polymerase sigma factor RpoS compare
BWI76_RS04715 -0.7 -1.2 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS03800 -0.7 -1.2 hypothetical protein compare
BWI76_RS08535 -0.7 -1.4 translocation protein TolB compare
BWI76_RS09080 -0.7 -1.4 molybdopterin-synthase adenylyltransferase MoeB compare
BWI76_RS23120 -0.7 -1.5 propanediol dehydratase medium subunit compare
BWI76_RS08705 -0.7 -2.9 putative LuxR family regulatory protein compare
BWI76_RS12870 -0.6 -1.3 putative phytanoyl-CoA dioxygenase compare
BWI76_RS06530 -0.6 -1.9 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS01170 -0.6 -2.3 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS08925 -0.6 -2.7 DNA-binding protein YbiB compare
BWI76_RS27305 -0.6 -4.2 glycosyl transferase compare
BWI76_RS18935 -0.6 -3.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS22700 -0.6 -2.3 sulfate adenylyltransferase subunit 2 compare
BWI76_RS04525 -0.6 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS12345 -0.6 -2.2 nitrite transporter compare
BWI76_RS18715 -0.6 -3.2 hypothetical protein compare
BWI76_RS02580 -0.6 -0.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS18770 -0.6 -0.9 DNA gyrase inhibitor compare
BWI76_RS02410 -0.6 -0.9 EF-P beta-lysylation protein EpmB compare
BWI76_RS06535 -0.6 -1.8 endopeptidase La compare
BWI76_RS17765 -0.6 -1.6 hypothetical protein compare
BWI76_RS10935 -0.6 -2.6 glucan biosynthesis glucosyltransferase H compare
BWI76_RS15210 -0.6 -1.5 LysR family transcriptional regulator compare
BWI76_RS15650 -0.6 -1.5 gp5 compare
BWI76_RS17805 -0.6 -0.9 membrane protein compare
BWI76_RS05555 -0.6 -1.7 Crl family RNA polymerase assembly factor compare
BWI76_RS08770 -0.6 -2.5 malonyl-ACP O-methyltransferase BioC compare
BWI76_RS07725 -0.6 -0.9 iron-enterobactin transporter permease compare
BWI76_RS17645 -0.6 -1.8 hypothetical protein compare
BWI76_RS11105 -0.6 -1.2 aminodeoxychorismate lyase compare
BWI76_RS14005 -0.6 -1.3 TetR family transcriptional regulator compare
BWI76_RS00640 -0.6 -1.7 L-rhamnose mutarotase compare
BWI76_RS18780 -0.6 -1.1 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS00240 -0.6 -1.7 FMN-binding protein MioC compare
BWI76_RS23050 -0.6 -0.9 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS04645 -0.6 -2.9 3-dehydroquinase compare
BWI76_RS00965 -0.6 -0.7 acetolactate synthase 2 small subunit compare
BWI76_RS01870 -0.6 -2.7 diacylglycerol kinase compare
BWI76_RS25115 -0.6 -2.7 argininosuccinate synthase compare
BWI76_RS05075 -0.6 -0.8 type II secretion system protein GspG compare
BWI76_RS11845 -0.6 -1.3 tryptophan synthase subunit beta compare
BWI76_RS16895 -0.6 -1.0 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS16490 -0.6 -1.4 glutaredoxin compare
BWI76_RS18870 -0.6 -0.9 protein NifZ compare
BWI76_RS13560 -0.6 -0.8 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS21675 -0.6 -1.0 hypothetical protein compare
BWI76_RS25320 -0.6 -2.2 glutamate synthase compare
BWI76_RS00415 -0.6 -1.8 glucose-1-phosphatase compare
BWI76_RS02810 -0.6 -1.1 sugar ABC transporter permease YjfF compare
BWI76_RS11430 -0.6 -0.8 lipoprotein compare
BWI76_RS27165 -0.6 -2.1 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS24400 -0.6 -2.9 outer membrane channel protein TolC compare
BWI76_RS13955 -0.6 -1.2 hypothetical protein compare
BWI76_RS14415 -0.6 -1.0 transcriptional regulator, TetR family protein compare
BWI76_RS21285 -0.6 -1.0 HAD family hydrolase compare
BWI76_RS23895 -0.6 -0.6 Xaa-Pro aminopeptidase compare
BWI76_RS15350 -0.5 -0.8 hypothetical protein compare
BWI76_RS17255 -0.5 -4.1 thymidine kinase compare
BWI76_RS17370 -0.5 -0.9 nitrate transporter NasD compare
BWI76_RS13245 -0.5 -1.1 DNA-damage-inducible protein I compare
BWI76_RS25435 -0.5 -1.6 membrane protein compare
BWI76_RS15835 -0.5 -0.5 hypothetical protein compare
BWI76_RS15825 -0.5 -0.5 hypothetical protein compare
BWI76_RS00850 -0.5 -3.3 acetylglutamate kinase compare
BWI76_RS05870 -0.5 -1.6 ABC transporter compare
BWI76_RS12495 -0.5 -1.1 2-Cys peroxiredoxin compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms