Experiment set12IT035 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with D-Salicin 240 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1544 -4.6 -4.4 SirA-like protein compare
Psyr_0951 -4.2 -4.4 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4340 -3.7 -11.1 phosphomethylpyrimidine kinase, putative compare
Psyr_1613 -3.7 -6.9 septum site-determining protein MinC compare
Psyr_4684 -3.4 -4.6 biotin synthesis protein BioC compare
Psyr_4740 -3.4 -8.4 thiazole-phosphate synthase compare
Psyr_4686 -3.4 -7.7 8-amino-7-oxononanoate synthase compare
Psyr_4687 -2.9 -9.1 biotin synthase compare
Psyr_4683 -2.9 -5.0 dethiobiotin synthase compare
Psyr_4341 -2.8 -8.8 thiamine-phosphate diphosphorylase compare
Psyr_4091 -2.4 -4.6 8-oxo-dGTPase compare
Psyr_2980 -2.4 -5.2 UDP-glucose pyrophosphorylase compare
Psyr_0014 -2.3 -5.2 lipid A biosynthesis acyltransferase compare
Psyr_0454 -2.2 -5.7 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0487 -2.1 -3.9 glutathione synthase compare
Psyr_2080 -2.1 -7.0 aminodeoxychorismate synthase, subunit I compare
Psyr_3008 -2.1 -6.8 Undecaprenyl-diphosphatase compare
Psyr_0849 -1.8 -9.3 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1751 -1.7 -4.2 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3152 -1.7 -3.1 hypothetical protein compare
Psyr_4136 -1.7 -3.0 BolA-like protein compare
Psyr_1371 -1.7 -6.8 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2641 -1.6 -4.3 hypothetical protein compare
Psyr_0034 -1.6 -4.6 tryptophan synthase, beta chain compare
Psyr_0281 -1.6 -3.4 ABC transporter compare
Psyr_0303 -1.6 -3.1 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_3886 -1.6 -1.8 methionyl-tRNA synthetase compare
Psyr_3208 -1.5 -3.0 NADH dehydrogenase subunit M compare
Psyr_1419 -1.5 -4.0 preQ(0) biosynthesis protein QueC compare
Psyr_0033 -1.5 -3.3 tryptophan synthase, alpha chain compare
Psyr_2488 -1.5 -3.9 hypothetical protein compare
Psyr_1556 -1.5 -2.0 hypothetical protein compare
Psyr_3281 -1.4 -2.4 Glycoside hydrolase, family 3, N-terminal compare
Psyr_4581 -1.4 -3.3 anthranilate synthase, component II compare
Psyr_1907 -1.4 -2.9 GTP cyclohydrolase I compare
Psyr_2471 -1.4 -2.5 hydroxymethylglutaryl-CoA lyase compare
Psyr_1748 -1.4 -5.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_4627 -1.4 -3.2 dimethyladenosine transferase compare
Psyr_0444 -1.4 -1.4 Malonate decarboxylase delta subunit compare
Psyr_3287 -1.3 -2.2 DNA topoisomerase I compare
Psyr_1802 -1.3 -2.5 transcriptional regulator, AsnC family compare
Psyr_2184 -1.3 -2.9 Short-chain dehydrogenase/reductase SDR compare
Psyr_0282 -1.3 -3.8 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4143 -1.2 -2.6 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_2557 -1.2 -1.6 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase-like protein compare
Psyr_2854 -1.2 -3.9 conserved hypothetical protein compare
Psyr_2095 -1.2 -4.2 Conserved TM helix compare
Psyr_3202 -1.1 -1.9 NADH dehydrogenase subunit G compare
Psyr_1780 -1.1 -2.0 transcriptional regulator, TetR family compare
Psyr_0565 -1.1 -4.5 Protein of unknown function UPF0126 compare
Psyr_3791 -1.1 -2.9 Helicase, C-terminal:DEAD/DEAH box helicase, N-terminal compare
Psyr_1408 -1.1 -2.4 Holliday junction endonuclease RuvC compare
Psyr_3854 -1.1 -1.4 OmpA/MotB compare
Psyr_0831 -1.1 -2.4 Two-component response regulator CbrB compare
Psyr_0255 -1.1 -2.0 glutamate-cysteine ligase compare
Psyr_3644 -1.0 -2.7 prephenate dehydrogenase compare
Psyr_0918 -1.0 -6.5 ABC transporter compare
Psyr_2084 -1.0 -3.1 transcriptional regulator, GntR family compare
Psyr_3427 -1.0 -1.5 conserved hypothetical protein compare
Psyr_1410 -1.0 -3.2 Holliday junction DNA helicase RuvB compare
Psyr_2190 -1.0 -1.6 NADH:flavin oxidoreductase/NADH oxidase compare
Psyr_0524 -1.0 -2.3 Lipopolysaccharide kinase compare
Psyr_1930 -1.0 -3.6 hypothetical protein compare
Psyr_4460 -1.0 -1.3 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_1121 -1.0 -1.9 6-phosphogluconolactonase compare
Psyr_4093 -1.0 -3.0 glutamate N-acetyltransferase compare
Psyr_2930 -1.0 -2.5 Glyoxalase/bleomycin resistance protein/dioxygenase compare
Psyr_3288 -1.0 -3.7 conserved hypothetical protein compare
Psyr_4194 -1.0 -3.6 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_0025 -0.9 -2.7 shikimate dehydrogenase compare
Psyr_1650 -0.9 -2.5 aminodeoxychorismate lyase apoprotein compare
Psyr_3419 -0.9 -3.1 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_3581 -0.9 -3.8 ribosomal large subunit pseudouridine synthase B compare
Psyr_0571 -0.9 -2.6 tRNA isopentenyltransferase compare
Psyr_1022 -0.9 -2.0 conserved hypothetical protein compare
Psyr_0574 -0.9 -3.4 protease FtsH subunit HflK compare
Psyr_4519 -0.9 -4.8 General substrate transporter:Major facilitator superfamily compare
Psyr_0917 -0.9 -4.9 ABC-2 compare
Psyr_4774 -0.9 -1.8 Hypothetical protein compare
Psyr_1910 -0.9 -3.1 VacJ-like lipoprotein compare
Psyr_5135 -0.9 -1.0 Protein of unknown function DUF37 compare
Psyr_2141 -0.8 -1.5 hypothetical protein compare
Psyr_4418 -0.8 -2.0 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_4754 -0.8 -1.8 16S rRNA m(2)G-966 methyltransferase compare
Psyr_3807 -0.8 -3.5 hypothetical protein compare
Psyr_3199 -0.8 -1.9 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_1530 -0.8 -2.6 hypothetical protein compare
Psyr_4424 -0.8 -4.2 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_0735 -0.8 -2.1 Peptidase S24, S26A and S26B compare
Psyr_2327 -0.8 -2.0 GTP cyclohydrolase subunit MoaA compare
Psyr_2348 -0.8 -1.6 hypothetical protein compare
Psyr_1458 -0.8 -2.3 hypothetical protein compare
Psyr_0435 -0.8 -1.4 membrane protein, putative compare
Psyr_4350 -0.8 -1.4 Protein of unknown function DUF218 compare
Psyr_3179 -0.8 -1.9 DNA translocase FtsK compare
Psyr_0826 -0.8 -3.4 glucose-6-phosphate isomerase compare
Psyr_2069 -0.8 -1.7 conserved hypothetical protein compare
Psyr_3040 -0.8 -2.6 conserved hypothetical protein compare
Psyr_2117 -0.8 -1.9 conserved hypothetical protein compare
Psyr_4118 -0.8 -3.4 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_2636 -0.8 -2.3 TspO/MBR-related protein compare
Psyr_2196 -0.8 -1.3 Urease accessory protein UreG compare
Psyr_3867 -0.8 -2.0 hypothetical protein compare
Psyr_1418 -0.8 -2.4 Radical SAM compare
Psyr_2092 -0.8 -2.0 Protein of unknown function 1935 compare
Psyr_3198 -0.8 -1.6 NADH dehydrogenase subunit B compare
Psyr_4991 -0.8 -1.3 hypothetical protein compare
Psyr_1935 -0.8 -3.1 Protein of unknown function DUF796 compare
Psyr_3850 -0.8 -1.8 lipoprotein, putative compare
Psyr_2962 -0.7 -3.6 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_2860 -0.7 -2.2 hypothetical protein compare
Psyr_1008 -0.7 -2.3 conserved hypothetical protein compare
Psyr_3107 -0.7 -1.5 conserved hypothetical protein compare
Psyr_0845 -0.7 -2.3 conserved hypothetical protein compare
Psyr_4015 -0.7 -1.1 conserved domain protein compare
Psyr_4115 -0.7 -1.3 phosphoheptose isomerase compare
Psyr_0475 -0.7 -1.5 Protein of unknown function YGGT compare
Psyr_2848 -0.7 -2.2 hypothetical protein compare
Psyr_0202 -0.7 -4.0 transcriptional regulator, LysR family compare
Psyr_4203 -0.7 -0.9 SsrA-binding protein compare
Psyr_2112 -0.7 -0.9 Protein with unknown function DUF469 compare
Psyr_2842 -0.7 -3.9 hypothetical protein compare
Psyr_1097 -0.7 -1.2 glycine cleavage system H protein compare
Psyr_1268 -0.7 -3.2 extracellular solute-binding protein, family 3:SLT compare
Psyr_4362 -0.7 -1.4 Rare lipoprotein A compare
Psyr_1614 -0.7 -1.6 lipid A biosynthesis acyltransferase compare
Psyr_3806 -0.7 -2.4 hypothetical protein compare
Psyr_0941 -0.7 -3.4 Conserved hypothetical protein 92 compare
Psyr_2411 -0.7 -2.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_3090 -0.7 -1.6 hypothetical protein compare
Psyr_0979 -0.7 -2.3 conserved hypothetical protein compare
Psyr_0081 -0.7 -1.2 ABC transporter compare
Psyr_2562 -0.6 -1.2 hypothetical protein compare
Psyr_0491 -0.6 -2.3 chemotaxis sensory transducer compare
Psyr_2897 -0.6 -2.5 regulatory protein, LuxR:Response regulator receiver compare
Psyr_4512 -0.6 -3.3 putative phage-related protein compare
Psyr_RNA28 -0.6 -0.9 tRNA-Val compare
Psyr_4845 -0.6 -1.1 conserved hypothetical protein compare
Psyr_0541 -0.6 -2.0 Small multidrug resistance protein compare
Psyr_3255 -0.6 -2.2 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_4622 -0.6 -2.4 Nucleotidyl transferase compare
Psyr_1638 -0.6 -1.9 RNAse E compare
Psyr_0830 -0.6 -2.8 Poly(A) polymerase compare
Psyr_2067 -0.6 -1.7 ABC transporter compare
Psyr_1700 -0.6 -3.0 Glycosyl hydrolase, BNR repeat protein compare
Psyr_1911 -0.6 -1.2 conserved hypothetical protein compare
Psyr_3954 -0.6 -2.3 GTP-binding protein LepA compare
Psyr_2664 -0.6 -3.1 hypothetical protein compare
Psyr_2449 -0.6 -2.2 Response regulator receiver compare
Psyr_1596 -0.6 -0.7 Helix-turn-helix motif protein compare
Psyr_3841 -0.6 -1.5 conserved hypothetical protein compare
Psyr_2115 -0.6 -1.5 Response regulator receiver compare
Psyr_2989 -0.6 -2.9 6-phosphogluconate dehydrogenase (decarboxylating) compare
Psyr_3525 -0.6 -2.0 3-hydroxyisobutyrate dehydrogenase compare
Psyr_3680 -0.6 -2.2 hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) / cobyrinate a,c-diamide synthase compare
Psyr_1616 -0.6 -1.8 Rieske [2Fe-2S] region compare
Psyr_3503 -0.6 -2.8 conserved hypothetical protein compare
Psyr_0531 -0.6 -1.0 LmbE-like protein compare
Psyr_1555 -0.6 -1.9 Cobyrinic acid a,c-diamide synthase compare
Psyr_2778 -0.6 -1.6 Phage minor tail protein L compare
Psyr_4750 -0.6 -1.5 cell division ATP-binding protein FtsE compare
Psyr_2383 -0.6 -1.5 Protein of unknown function DUF72 compare
Psyr_4408 -0.6 -3.4 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_0579 -0.6 -3.9 RNAse R compare
Psyr_4089 -0.6 -2.3 PAS compare
Psyr_3795 -0.6 -1.0 hypothetical protein compare
Psyr_1864 -0.6 -1.8 spermidine synthase compare
Psyr_0638 -0.6 -1.7 Peptidase S16, lon N-terminal compare
Psyr_5133 -0.6 -1.8 tRNA modification GTPase trmE compare
Psyr_2211 -0.6 -1.6 monooxygenase, NtaA/SnaA/SoxA family compare
Psyr_4068 -0.5 -1.4 conserved hypothetical protein compare
Psyr_5046 -0.5 -2.7 Transglycosylase-associated protein compare
Psyr_4618 -0.5 -2.1 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1714 -0.5 -2.2 exonuclease SbcC compare
Psyr_3842 -0.5 -2.7 SNF2-related:Helicase, C-terminal:Type III restriction enzyme, res subunit compare
Psyr_1988 -0.5 -1.7 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_0394 -0.5 -2.2 Heat shock protein HslU compare
Psyr_2028 -0.5 -3.0 conserved hypothetical protein compare
Psyr_1255 -0.5 -1.7 conserved hypothetical protein compare
Psyr_0900 -0.5 -2.6 TRAP dicarboxylate transporter- DctP subunit compare
Psyr_3620 -0.5 -1.2 hypothetical protein compare
Psyr_0549 -0.5 -1.1 Metallophosphoesterase compare
Psyr_4351 -0.5 -1.6 conserved domain protein compare
Psyr_2088 -0.5 -0.6 2-methylaconitate cis-trans isomerase compare
Psyr_2607 -0.5 -2.4 regulatory protein, LuxR compare
Psyr_3836 -0.5 -2.7 AMP-dependent synthetase and ligase compare
Psyr_1573 -0.5 -1.6 cyclic nucleotide-binding protein compare
Psyr_3305 -0.5 -2.5 Glycosyl transferase, group 1 compare
Psyr_1717 -0.5 -1.1 TPR repeat:von Willebrand factor, type A compare
Psyr_2456 -0.5 -1.6 Short-chain dehydrogenase/reductase SDR compare
Psyr_3547 -0.5 -1.6 transcriptional regulator, TetR family compare
Psyr_2031 -0.5 -1.6 ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal compare
Psyr_2941 -0.5 -1.9 amino acid ABC transporter substrate-binding protein, PAAT family compare
Psyr_3034 -0.5 -1.5 conserved hypothetical protein compare
Psyr_0528 -0.5 -1.1 Carbamoyltransferase compare
Psyr_3135 -0.5 -0.9 transcriptional regulator, GntR family compare
Psyr_3429 -0.5 -1.8 CheW-like protein compare
Psyr_0699 -0.5 -1.5 CDS compare
Psyr_2823 -0.5 -0.9 hypothetical protein compare
Psyr_4092 -0.5 -2.1 Glutathione S-transferase, N-terminal compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress D-Salicin across organisms