Experiment set12IT034 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Quercetin 360 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -5.2 -3.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_1544 -4.1 -4.9 SirA-like protein compare
Psyr_4740 -3.9 -9.3 thiazole-phosphate synthase compare
Psyr_4684 -3.6 -4.3 biotin synthesis protein BioC compare
Psyr_1613 -3.6 -6.8 septum site-determining protein MinC compare
Psyr_4341 -3.3 -9.5 thiamine-phosphate diphosphorylase compare
Psyr_4687 -3.0 -9.2 biotin synthase compare
Psyr_1556 -3.0 -4.0 hypothetical protein compare
Psyr_4340 -2.9 -10.9 phosphomethylpyrimidine kinase, putative compare
Psyr_4686 -2.7 -7.6 8-amino-7-oxononanoate synthase compare
Psyr_0487 -2.5 -4.0 glutathione synthase compare
Psyr_0259 -2.4 -4.4 Osmolarity sensor protein envZ compare
Psyr_0034 -2.4 -5.0 tryptophan synthase, beta chain compare
Psyr_3020 -2.3 -3.1 precorrin-4 C11-methyltransferase compare
Psyr_4627 -2.2 -2.8 dimethyladenosine transferase compare
Psyr_3008 -2.2 -6.7 Undecaprenyl-diphosphatase compare
Psyr_4683 -2.1 -4.6 dethiobiotin synthase compare
Psyr_0033 -2.1 -4.2 tryptophan synthase, alpha chain compare
Psyr_2520 -2.0 -2.8 SOS-response transcriptional repressor, LexA compare
Psyr_1962 -1.9 -9.8 TonB-dependent siderophore receptor compare
Psyr_0917 -1.9 -8.8 ABC-2 compare
Psyr_0849 -1.8 -8.5 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_2854 -1.8 -4.8 conserved hypothetical protein compare
Psyr_1373 -1.8 -3.1 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1943 -1.8 -6.0 Sigma-70 region 2 compare
Psyr_0454 -1.8 -4.6 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0255 -1.8 -2.8 glutamate-cysteine ligase compare
Psyr_3213 -1.8 -3.7 Propeptide, PepSY amd peptidase M4 compare
Psyr_4362 -1.8 -3.2 Rare lipoprotein A compare
Psyr_0826 -1.7 -7.4 glucose-6-phosphate isomerase compare
Psyr_0918 -1.7 -9.9 ABC transporter compare
Psyr_4882 -1.7 -6.6 protein translocase subunit secB compare
Psyr_2347 -1.7 -2.3 hypothetical protein compare
Psyr_1748 -1.7 -5.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_1907 -1.7 -4.2 GTP cyclohydrolase I compare
Psyr_4808 -1.7 -2.4 conserved hypothetical protein compare
Psyr_2980 -1.6 -3.5 UDP-glucose pyrophosphorylase compare
Psyr_3808 -1.6 -1.8 hypothetical protein compare
Psyr_0014 -1.5 -3.7 lipid A biosynthesis acyltransferase compare
Psyr_4091 -1.5 -2.7 8-oxo-dGTPase compare
Psyr_0475 -1.5 -2.7 Protein of unknown function YGGT compare
Psyr_3287 -1.5 -2.5 DNA topoisomerase I compare
Psyr_0831 -1.5 -2.1 Two-component response regulator CbrB compare
Psyr_3840 -1.5 -4.4 conserved hypothetical protein compare
Psyr_1555 -1.5 -3.8 Cobyrinic acid a,c-diamide synthase compare
Psyr_4015 -1.4 -2.0 conserved domain protein compare
Psyr_3202 -1.4 -1.9 NADH dehydrogenase subunit G compare
Psyr_2823 -1.4 -1.6 hypothetical protein compare
Psyr_2080 -1.3 -4.8 aminodeoxychorismate synthase, subunit I compare
Psyr_2143 -1.3 -1.6 delta1-piperideine 2-carboxylate reductase compare
Psyr_1955 -1.3 -2.4 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4136 -1.3 -1.7 BolA-like protein compare
Psyr_0565 -1.3 -4.5 Protein of unknown function UPF0126 compare
Psyr_4460 -1.3 -2.4 3,4-dihydroxy-2-butanone 4-phosphate synthase / GTP cyclohydrolase II compare
Psyr_0549 -1.3 -2.1 Metallophosphoesterase compare
Psyr_3473 -1.2 -2.4 Flagellar P-ring protein compare
Psyr_0268 -1.2 -2.2 DSBA oxidoreductase compare
Psyr_0377 -1.2 -5.8 Periplasmic glucan biosynthesis protein, MdoG compare
Psyr_3954 -1.2 -3.0 GTP-binding protein LepA compare
Psyr_1953 -1.2 -1.7 conserved hypothetical protein compare
Psyr_2471 -1.2 -2.2 hydroxymethylglutaryl-CoA lyase compare
Psyr_2030 -1.2 -2.7 Calcium-binding EF-hand compare
Psyr_4203 -1.2 -1.4 SsrA-binding protein compare
Psyr_2855 -1.2 -3.0 methionine synthase (B12-independent) compare
Psyr_3698 -1.1 -2.7 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_1930 -1.1 -2.2 hypothetical protein compare
Psyr_3583 -1.1 -3.7 condensin subunit ScpB compare
Psyr_4138 -1.1 -3.8 Toluene tolerance compare
Psyr_3427 -1.1 -1.2 conserved hypothetical protein compare
Psyr_4424 -1.1 -5.0 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_1268 -1.1 -4.7 extracellular solute-binding protein, family 3:SLT compare
Psyr_1749 -1.1 -4.9 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_0202 -1.1 -4.7 transcriptional regulator, LysR family compare
Psyr_1152 -1.1 -2.0 transcriptional regulator, ArsR family compare
Psyr_4089 -1.1 -4.6 PAS compare
Psyr_4566 -1.1 -6.6 Peptidase M23B compare
Psyr_3620 -1.1 -1.6 hypothetical protein compare
Psyr_1935 -1.1 -3.5 Protein of unknown function DUF796 compare
Psyr_RNA61 -1.1 -2.3 tRNA-Gly compare
Psyr_0393 -1.1 -3.0 Protein of unknown function DUF971 compare
Psyr_2180 -1.1 -2.5 transcriptional regulator, LysR family compare
Psyr_5029 -1.0 -2.0 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_3419 -1.0 -3.3 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_2848 -1.0 -3.4 hypothetical protein compare
Psyr_2562 -1.0 -2.1 hypothetical protein compare
Psyr_0281 -1.0 -2.8 ABC transporter compare
Psyr_1885 -1.0 -1.2 hypothetical protein compare
Psyr_1247 -1.0 -1.5 conserved hypothetical protein compare
Psyr_0579 -1.0 -6.6 RNAse R compare
Psyr_3581 -1.0 -3.9 ribosomal large subunit pseudouridine synthase B compare
Psyr_0378 -1.0 -4.8 Glycosyl transferase, family 2 compare
Psyr_3090 -1.0 -2.6 hypothetical protein compare
Psyr_1832 -1.0 -1.6 Exonuclease compare
Psyr_5133 -1.0 -3.1 tRNA modification GTPase trmE compare
Psyr_3258 -1.0 -3.2 conserved hypothetical protein compare
Psyr_0044 -1.0 -1.7 transferase hexapeptide repeat protein compare
Psyr_1911 -1.0 -2.2 conserved hypothetical protein compare
Psyr_3198 -1.0 -1.7 NADH dehydrogenase subunit B compare
Psyr_1013 -1.0 -2.3 hypothetical protein compare
Psyr_4351 -1.0 -3.6 conserved domain protein compare
Psyr_3118 -0.9 -2.3 transcriptional regulator, GntR family compare
Psyr_0169 -0.9 -4.0 Hsp33 protein compare
Psyr_3807 -0.9 -3.9 hypothetical protein compare
Psyr_2897 -0.9 -3.5 regulatory protein, LuxR:Response regulator receiver compare
Psyr_4115 -0.9 -1.3 phosphoheptose isomerase compare
Psyr_1751 -0.9 -2.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3896 -0.9 -0.9 BFD-like [2Fe-2S]-binding region compare
Psyr_1719 -0.9 -2.8 conserved hypothetical protein compare
Psyr_4009 -0.9 -3.9 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3034 -0.9 -2.3 conserved hypothetical protein compare
Psyr_0648 -0.9 -4.6 transporter, putative compare
Psyr_2536 -0.9 -2.8 transcriptional regulator, LysR family compare
Psyr_4140 -0.9 -1.8 Protein of unknown function DUF140 compare
Psyr_1910 -0.9 -3.1 VacJ-like lipoprotein compare
Psyr_0845 -0.9 -2.2 conserved hypothetical protein compare
Psyr_3755 -0.9 -1.1 conserved hypothetical protein compare
Psyr_2875 -0.9 -2.2 monosaccharide ABC transporter membrane protein, CUT2 family compare
Psyr_1458 -0.9 -1.9 hypothetical protein compare
Psyr_0303 -0.9 -1.7 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_2481 -0.9 -2.2 thiol peroxidase (atypical 2-Cys peroxiredoxin) compare
Psyr_0533 -0.9 -3.1 conserved hypothetical protein compare
Psyr_5072 -0.9 -0.9 Cobalamin synthesis protein/P47K:Cobalamin synthesis protein/P47K compare
Psyr_4519 -0.8 -3.7 General substrate transporter:Major facilitator superfamily compare
Psyr_2927 -0.8 -1.0 transcriptional regulator, TetR family compare
Psyr_2092 -0.8 -1.9 Protein of unknown function 1935 compare
Psyr_2925 -0.8 -2.1 Helix-turn-helix motif protein compare
Psyr_1418 -0.8 -1.6 Radical SAM compare
Psyr_1334 -0.8 -1.9 Cysteine desulfuration protein SufE compare
Psyr_2641 -0.8 -1.5 hypothetical protein compare
Psyr_0574 -0.8 -3.0 protease FtsH subunit HflK compare
Psyr_5135 -0.8 -0.7 Protein of unknown function DUF37 compare
Psyr_1975 -0.8 -1.8 Integrase, catalytic region compare
Psyr_0215 -0.8 -4.4 Exodeoxyribonuclease III xth compare
Psyr_1121 -0.8 -1.7 6-phosphogluconolactonase compare
Psyr_3787 -0.8 -2.8 conserved hypothetical protein compare
Psyr_1650 -0.8 -1.4 aminodeoxychorismate lyase apoprotein compare
Psyr_2122 -0.8 -2.0 protocatechuate 3,4-dioxygenase, beta subunit compare
Psyr_2595 -0.8 -2.8 Dimethylmenaquinone methyltransferase compare
Psyr_3567 -0.8 -2.1 L-arginine ABC transporter ATP-binding protein / L-ornithine ABC transporter ATP-binding protein compare
Psyr_2989 -0.8 -2.9 6-phosphogluconate dehydrogenase (decarboxylating) compare
Psyr_2088 -0.8 -1.2 2-methylaconitate cis-trans isomerase compare
Psyr_3199 -0.8 -1.9 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_1966 -0.8 -1.2 Peptidase M19, renal dipeptidase compare
Psyr_1638 -0.8 -1.4 RNAse E compare
Psyr_3146 -0.8 -1.2 general secretion pathway protein J, putative compare
Psyr_3116 -0.7 -2.0 transcriptional regulator, CdaR family compare
Psyr_1408 -0.7 -1.8 Holliday junction endonuclease RuvC compare
Psyr_0889 -0.7 -2.2 SpoVT/AbrB-like protein compare
Psyr_1800 -0.7 -2.2 transcriptional regulator, LysR family compare
Psyr_0541 -0.7 -1.9 Small multidrug resistance protein compare
Psyr_2248 -0.7 -2.4 Phosphonate-binding periplasmic protein compare
Psyr_3854 -0.7 -0.8 OmpA/MotB compare
Psyr_1714 -0.7 -2.8 exonuclease SbcC compare
Psyr_0376 -0.7 -1.8 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_3036 -0.7 -1.5 transcriptional regulator, TetR family compare
Psyr_2422 -0.7 -2.8 transcriptional regulator, LysR family compare
Psyr_1951 -0.7 -3.4 Periplasmic solute binding protein compare
Psyr_1379 -0.7 -1.4 Regulatory protein RecX compare
Psyr_0284 -0.7 -3.3 Electron transport protein SCO1/SenC compare
Psyr_1404 -0.7 -4.2 Ferritin and Dps compare
Psyr_0571 -0.7 -2.3 tRNA isopentenyltransferase compare
Psyr_RNA78 -0.7 -2.0 5S ribosomal RNA compare
Psyr_4465 -0.7 -1.1 conserved domain protein compare
Psyr_3806 -0.7 -2.0 hypothetical protein compare
Psyr_0291 -0.7 -2.4 DedA compare
Psyr_2602 -0.7 -3.1 transcriptional regulator, LuxR family compare
Psyr_2475 -0.7 -2.5 phosphate ABC transporter substrate-binding protein, PhoT family compare
Psyr_0400 -0.7 -3.5 nuclease (SNase-like) compare
Psyr_1969 -0.7 -3.0 ABC transporter:Protein of unknown function DUF214 compare
Psyr_3913 -0.7 -1.6 Helix-turn-helix, Fis-type compare
Psyr_4464 -0.7 -0.9 lipoprotein, putative compare
Psyr_1270 -0.7 -0.9 conserved hypothetical protein compare
Psyr_4422 -0.7 -3.2 Protein of unknown function DUF461 compare
Psyr_1163 -0.7 -1.8 Isochorismatase hydrolase compare
Psyr_2270 -0.7 -1.6 transferase hexapeptide repeat protein compare
Psyr_1193 -0.7 -1.4 type III helper protein HrpZ1 compare
Psyr_3208 -0.7 -1.5 NADH dehydrogenase subunit M compare
Psyr_2182 -0.7 -2.7 hypothetical protein compare
Psyr_4582 -0.7 -0.9 hypothetical protein compare
Psyr_3902 -0.7 -3.1 ABC transporter:TOBE compare
Psyr_4476 -0.7 -3.3 dTDP-4-dehydrorhamnose reductase compare
Psyr_2508 -0.7 -2.1 transcriptional regulator, IclR family compare
Psyr_4567 -0.7 -1.7 Protein of unknown function UPF0075 compare
Psyr_1952 -0.7 -1.5 hypothetical protein compare
Psyr_4117 -0.7 -3.1 Stringent starvation protein B compare
Psyr_1308 -0.7 -2.1 Protein-glutamate methylesterase compare
Psyr_3152 -0.7 -0.6 hypothetical protein compare
Psyr_4996 -0.7 -3.5 hypothetical protein compare
Psyr_2651 -0.7 -3.0 conserved hypothetical protein compare
Psyr_1033 -0.6 -2.1 YebG compare
Psyr_4991 -0.6 -1.0 hypothetical protein compare
Psyr_3675 -0.6 -1.5 adenosylcobinamide kinase compare
Psyr_3172 -0.6 -2.4 Glycosyl transferase, family 3 compare
Psyr_2535 -0.6 -2.8 GGDEF domain protein compare
Psyr_1801 -0.6 -2.0 1-aminocyclopropane-1-carboxylate deaminase compare
Psyr_2462 -0.6 -2.3 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_3342 -0.6 -0.8 conserved hypothetical protein compare
Psyr_1400 -0.6 -4.9 outer membrane porin compare
Psyr_1791 -0.6 -1.2 HAD-superfamily hydrolase, subfamily IA, variant 2 compare
Psyr_0784 -0.6 -1.5 CheW-like protein compare


Specific Phenotypes

For 2 genes in this experiment

For stress Quercetin in Pseudomonas syringae pv. syringae B728a

For stress Quercetin across organisms