Experiment set12IT033 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Ferulic Acid 180 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_0951 -5.2 -3.6 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4740 -4.9 -8.1 thiazole-phosphate synthase compare
Psyr_1544 -4.9 -3.4 SirA-like protein compare
Psyr_0281 -4.0 -4.4 ABC transporter compare
Psyr_4684 -3.6 -3.8 biotin synthesis protein BioC compare
Psyr_4581 -3.5 -3.0 anthranilate synthase, component II compare
Psyr_4341 -3.4 -8.9 thiamine-phosphate diphosphorylase compare
Psyr_1613 -3.3 -5.4 septum site-determining protein MinC compare
Psyr_4136 -3.3 -3.0 BolA-like protein compare
Psyr_4340 -3.3 -8.8 phosphomethylpyrimidine kinase, putative compare
Psyr_0383 -3.2 -2.2 Twin-arginine translocation protein TatB compare
Psyr_4687 -3.2 -8.7 biotin synthase compare
Psyr_1371 -3.1 -9.8 5'-nucleotidase / exopolyphosphatase / 3'-nucleotidase compare
Psyr_2285 -3.1 -2.9 Twin-arginine translocation pathway signal compare
Psyr_4686 -3.0 -7.9 8-amino-7-oxononanoate synthase compare
Psyr_4991 -2.8 -3.3 hypothetical protein compare
Psyr_0831 -2.7 -3.2 Two-component response regulator CbrB compare
Psyr_4683 -2.6 -4.9 dethiobiotin synthase compare
Psyr_3152 -2.5 -2.8 hypothetical protein compare
Psyr_1650 -2.5 -3.4 aminodeoxychorismate lyase apoprotein compare
Psyr_0454 -2.4 -6.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_0565 -2.4 -7.5 Protein of unknown function UPF0126 compare
Psyr_0034 -2.4 -4.6 tryptophan synthase, beta chain compare
Psyr_4091 -2.3 -3.9 8-oxo-dGTPase compare
Psyr_4203 -2.2 -1.5 SsrA-binding protein compare
Psyr_5133 -2.2 -4.2 tRNA modification GTPase trmE compare
Psyr_2080 -2.1 -5.2 aminodeoxychorismate synthase, subunit I compare
Psyr_2594 -2.1 -2.3 unknown conserved protein in bacilli compare
Psyr_3581 -2.1 -7.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_2471 -2.1 -3.0 hydroxymethylglutaryl-CoA lyase compare
Psyr_1907 -2.1 -3.4 GTP cyclohydrolase I compare
Psyr_1802 -2.1 -2.7 transcriptional regulator, AsnC family compare
Psyr_3008 -2.0 -5.4 Undecaprenyl-diphosphatase compare
Psyr_0014 -2.0 -3.2 lipid A biosynthesis acyltransferase compare
Psyr_0487 -2.0 -2.7 glutathione synthase compare
Psyr_3427 -1.9 -2.5 conserved hypothetical protein compare
Psyr_2854 -1.9 -4.6 conserved hypothetical protein compare
Psyr_4940 -1.9 -3.2 3'(2'),5'-bisphosphate nucleotidase compare
Psyr_1379 -1.9 -1.6 Regulatory protein RecX compare
Psyr_0255 -1.8 -2.4 glutamate-cysteine ligase compare
Psyr_0822 -1.8 -2.2 1-phosphofructokinase compare
Psyr_1747 -1.8 -4.2 ATP-dependent Clp protease proteolytic subunit ClpP compare
Psyr_0373 -1.8 -3.2 CDS compare
Psyr_3198 -1.8 -2.3 NADH dehydrogenase subunit B compare
Psyr_1556 -1.7 -2.4 hypothetical protein compare
Psyr_3208 -1.6 -2.0 NADH dehydrogenase subunit M compare
Psyr_2112 -1.6 -3.3 Protein with unknown function DUF469 compare
Psyr_3703 -1.6 -2.6 Flavodoxin/nitric oxide synthase compare
Psyr_3342 -1.6 -3.1 conserved hypothetical protein compare
Psyr_4582 -1.6 -1.5 hypothetical protein compare
Psyr_3644 -1.6 -4.6 prephenate dehydrogenase compare
Psyr_4627 -1.5 -2.6 dimethyladenosine transferase compare
Psyr_3118 -1.5 -3.9 transcriptional regulator, GntR family compare
Psyr_3028 -1.5 -2.4 Protein of unknown function DUF28 compare
Psyr_3055 -1.4 -2.1 Aminoglycoside phosphotransferase compare
Psyr_2855 -1.4 -3.2 methionine synthase (B12-independent) compare
Psyr_0033 -1.4 -2.8 tryptophan synthase, alpha chain compare
Psyr_3755 -1.4 -2.4 conserved hypothetical protein compare
Psyr_1749 -1.4 -5.4 ATP-dependent proteinase, Serine peptidase, MEROPS family S16 compare
Psyr_5132 -1.3 -2.6 Glucose-inhibited division protein A subfamily compare
Psyr_4634 -1.3 -1.6 Polynucleotide adenylyltransferase:Metal-dependent phosphohydrolase, HD subdomain protein compare
Psyr_4519 -1.3 -4.2 General substrate transporter:Major facilitator superfamily compare
Psyr_1334 -1.3 -3.5 Cysteine desulfuration protein SufE compare
Psyr_3620 -1.3 -1.3 hypothetical protein compare
Psyr_4089 -1.3 -4.7 PAS compare
Psyr_1748 -1.3 -3.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0830 -1.2 -3.3 Poly(A) polymerase compare
Psyr_3419 -1.2 -3.1 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_0849 -1.2 -5.9 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_1930 -1.2 -3.2 hypothetical protein compare
Psyr_1751 -1.2 -3.6 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_1719 -1.2 -2.9 conserved hypothetical protein compare
Psyr_4093 -1.2 -3.6 glutamate N-acetyltransferase compare
Psyr_1373 -1.2 -2.0 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1378 -1.2 -2.0 RecA protein compare
Psyr_5067 -1.2 -3.6 conserved hypothetical protein compare
Psyr_0282 -1.2 -2.0 Binding-protein-dependent transport systems inner membrane component compare
Psyr_0826 -1.2 -3.9 glucose-6-phosphate isomerase compare
Psyr_0917 -1.2 -5.5 ABC-2 compare
Psyr_4138 -1.2 -2.3 Toluene tolerance compare
Psyr_4967 -1.1 -3.4 conserved hypothetical protein compare
Psyr_3808 -1.1 -1.4 hypothetical protein compare
Psyr_4838 -1.1 -1.4 transcriptional regulator, MerR family compare
Psyr_4143 -1.1 -1.5 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_3905 -1.1 -4.6 glycerol kinase compare
Psyr_3954 -1.1 -3.8 GTP-binding protein LepA compare
Psyr_0918 -1.1 -6.4 ABC transporter compare
Psyr_0303 -1.1 -1.5 Ferredoxin:Oxidoreductase FAD/NAD(P)-binding protein compare
Psyr_0832 -1.1 -5.1 Two-component sensor kinase CbrA compare
Psyr_3199 -1.1 -2.2 NADH dehydrogenase subunit D / NADH dehydrogenase subunit C compare
Psyr_2562 -1.1 -1.1 hypothetical protein compare
Psyr_4408 -1.0 -5.3 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal:Histidine kinase:Histidine kinase compare
Psyr_4278 -1.0 -1.5 regulatory protein, LuxR compare
Psyr_4019 -1.0 -2.2 H-NS family protein MvaT compare
Psyr_3193 -1.0 -1.7 Transcription factor jumonji, jmjC compare
Psyr_4350 -1.0 -1.9 Protein of unknown function DUF218 compare
Psyr_2980 -1.0 -2.8 UDP-glucose pyrophosphorylase compare
Psyr_3701 -1.0 -1.5 thioredoxin, putative compare
Psyr_4424 -1.0 -4.3 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_1410 -1.0 -2.6 Holliday junction DNA helicase RuvB compare
Psyr_1458 -1.0 -3.9 hypothetical protein compare
Psyr_0579 -1.0 -5.7 RNAse R compare
Psyr_1596 -1.0 -0.9 Helix-turn-helix motif protein compare
Psyr_0724 -1.0 -1.2 conserved hypothetical protein compare
Psyr_2791 -1.0 -3.0 hypothetical protein compare
Psyr_2694 -1.0 -1.9 conserved hypothetical protein compare
Psyr_3287 -1.0 -1.3 DNA topoisomerase I compare
Psyr_0535 -1.0 -2.4 toluene tolerance protein, putative compare
Psyr_3484 -1.0 -2.2 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_1251 -0.9 -1.6 quinoprotein compare
Psyr_3807 -0.9 -3.3 hypothetical protein compare
Psyr_0475 -0.9 -1.7 Protein of unknown function YGGT compare
Psyr_1555 -0.9 -2.3 Cobyrinic acid a,c-diamide synthase compare
Psyr_0941 -0.9 -3.7 Conserved hypothetical protein 92 compare
Psyr_0386 -0.9 -2.8 phosphoribosyl-AMP cyclohydrolase compare
Psyr_0215 -0.9 -4.9 Exodeoxyribonuclease III xth compare
Psyr_3202 -0.9 -1.9 NADH dehydrogenase subunit G compare
Psyr_1108 -0.9 -4.5 glyceraldehyde-3-phosphate dehydrogenase compare
Psyr_2552 -0.9 -1.9 cyclase/dehydrase compare
Psyr_1372 -0.9 -2.4 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_2327 -0.9 -1.7 GTP cyclohydrolase subunit MoaA compare
Psyr_3684 -0.9 -1.9 NLP/P60 compare
Psyr_2030 -0.9 -1.3 Calcium-binding EF-hand compare
Psyr_1638 -0.9 -2.2 RNAse E compare
Psyr_2196 -0.9 -1.1 Urease accessory protein UreG compare
Psyr_1009 -0.9 -2.6 Peptidylprolyl isomerase, FKBP-type compare
Psyr_4118 -0.9 -3.3 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_3281 -0.9 -2.5 Glycoside hydrolase, family 3, N-terminal compare
Psyr_0571 -0.9 -1.7 tRNA isopentenyltransferase compare
Psyr_1069 -0.9 -1.6 molybdopterin synthase subunit MoaE compare
Psyr_1268 -0.9 -3.2 extracellular solute-binding protein, family 3:SLT compare
Psyr_2842 -0.9 -4.2 hypothetical protein compare
Psyr_0793 -0.8 -2.6 conserved hypothetical protein compare
Psyr_1841 -0.8 -3.8 Aminotransferase, class I and II compare
Psyr_3034 -0.8 -2.6 conserved hypothetical protein compare
Psyr_4622 -0.8 -2.7 Nucleotidyl transferase compare
Psyr_5065 -0.8 -3.9 ATP-dependent DNA helicase UvrD compare
Psyr_2397 -0.8 -2.5 transcriptional regulator, LysR family compare
Psyr_0575 -0.8 -1.6 protease FtsH subunit HflC compare
Psyr_1733 -0.8 -1.4 Peptidyl-prolyl cis-trans isomerase, cyclophilin type compare
Psyr_0792 -0.8 -1.9 conserved hypothetical protein compare
Psyr_0493 -0.8 -1.3 CheW-like protein compare
Psyr_2095 -0.8 -2.1 Conserved TM helix compare
Psyr_2728 -0.8 -2.9 vanillin synthase / trans-feruloyl-CoA hydratase compare
Psyr_0567 -0.8 -2.3 Protein of unknown function UPF0031:YjeF-related protein, N-terminal compare
Psyr_1024 -0.8 -1.8 Flavodoxin/nitric oxide synthase compare
Psyr_4754 -0.8 -1.2 16S rRNA m(2)G-966 methyltransferase compare
Psyr_4300 -0.8 -1.3 DNA polymerase III, epsilon subunit compare
Psyr_3258 -0.8 -2.1 conserved hypothetical protein compare
Psyr_3146 -0.8 -0.9 general secretion pathway protein J, putative compare
Psyr_3886 -0.8 -1.1 methionyl-tRNA synthetase compare
Psyr_4860 -0.8 -0.7 Integrase, catalytic region compare
Psyr_2929 -0.8 -2.0 transcriptional regulator, LysR family compare
Psyr_1002 -0.8 -2.2 nucleoside ABC transporter ATP-binding protein compare
Psyr_1317 -0.8 -0.8 conserved hypothetical protein compare
Psyr_3904 -0.8 -3.5 Major intrinsic protein compare
Psyr_3395 -0.8 -1.6 FlhB domain protein compare
Psyr_4194 -0.8 -2.2 DnaJ central region:Heat shock protein DnaJ, N-terminal:Chaperone DnaJ, C-terminal compare
Psyr_3590 -0.8 -1.5 conserved hypothetical protein compare
Psyr_0982 -0.8 -2.0 conserved hypothetical protein compare
Psyr_0202 -0.7 -3.4 transcriptional regulator, LysR family compare
Psyr_1588 -0.7 -1.4 Putative exonuclease, RdgC compare
Psyr_2200 -0.7 -0.9 UreE urease accessory, N-terminal compare
Psyr_1614 -0.7 -2.3 lipid A biosynthesis acyltransferase compare
Psyr_0490 -0.7 -2.5 CheW-like protein compare
Psyr_4512 -0.7 -3.0 putative phage-related protein compare
Psyr_2263 -0.7 -3.1 Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal compare
Psyr_3995 -0.7 -1.9 Helix-turn-helix, Fis-type compare
Psyr_4068 -0.7 -1.6 conserved hypothetical protein compare
Psyr_0485 -0.7 -2.8 Protein of unknown function DUF179 compare
Psyr_4789 -0.7 -2.0 lipoprotein, putative compare
Psyr_2209 -0.7 -1.6 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_3180 -0.7 -2.3 Leucyl/phenylalanyl-tRNA--protein transferase compare
Psyr_4015 -0.7 -0.8 conserved domain protein compare
Psyr_4049 -0.7 -2.5 lyso-ornithine lipid acyltransferase compare
Psyr_0025 -0.7 -1.5 shikimate dehydrogenase compare
Psyr_3694 -0.7 -1.9 MazG, bacterial compare
Psyr_2067 -0.7 -1.1 ABC transporter compare
Psyr_4887 -0.7 -3.7 Peptidase S41A, C-terminal protease compare
Psyr_2642 -0.7 -2.2 hypothetical protein compare
Psyr_2441 -0.7 -2.7 transcriptional regulator, AraC family compare
Psyr_3672 -0.7 -2.3 cobalamin-5'-phosphate synthase compare
Psyr_3120 -0.7 -2.0 D-glucarate dehydratase compare
Psyr_3610 -0.7 -1.2 GAF compare
Psyr_2345 -0.7 -3.2 ea59 protein compare
Psyr_4476 -0.7 -1.9 dTDP-4-dehydrorhamnose reductase compare
Psyr_3062 -0.7 -2.8 transcriptional regulator, LysR family compare
Psyr_1774 -0.7 -1.7 Mg2+ transporter protein, CorA-like protein compare
Psyr_1910 -0.7 -2.2 VacJ-like lipoprotein compare
Psyr_1324 -0.7 -1.9 conserved hypothetical protein compare
Psyr_0729 -0.7 -2.2 CDS compare
Psyr_0393 -0.7 -1.6 Protein of unknown function DUF971 compare
Psyr_1670 -0.7 -1.4 Short-chain dehydrogenase/reductase SDR compare
Psyr_2354 -0.7 -2.7 Taurine catabolism dioxygenase TauD/TfdA compare
Psyr_4882 -0.7 -3.2 protein translocase subunit secB compare
Psyr_2887 -0.7 -1.0 Endoribonuclease L-PSP compare
Psyr_4363 -0.7 -2.6 membrane-bound lytic murein transglycosylase B compare
Psyr_2830 -0.7 -0.9 conserved hypothetical protein compare
Psyr_4161 -0.7 -0.9 Rod shape-determining protein MreD compare
Psyr_2809 -0.7 -1.2 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas syringae pv. syringae B728a in stress experiments

For stress Ferulic Acid across organisms