Experiment set12IT031 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Novobiocin sodium salt 250 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_4008 -4.3 -23.5 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_0951 -4.3 -5.0 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4009 -3.9 -11.3 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3808 -3.8 -1.9 hypothetical protein compare
Psyr_4007 -3.7 -10.6 Secretion protein HlyD compare
Psyr_4740 -3.4 -10.2 thiazole-phosphate synthase compare
Psyr_1544 -3.4 -6.0 SirA-like protein compare
Psyr_4340 -3.3 -12.2 phosphomethylpyrimidine kinase, putative compare
Psyr_1930 -3.3 -5.5 hypothetical protein compare
Psyr_1268 -2.9 -9.5 extracellular solute-binding protein, family 3:SLT compare
Psyr_4991 -2.9 -3.3 hypothetical protein compare
Psyr_3640 -2.8 -4.3 conserved hypothetical protein compare
Psyr_4774 -2.8 -3.0 Hypothetical protein compare
Psyr_1556 -2.7 -2.3 hypothetical protein compare
Psyr_1613 -2.7 -5.7 septum site-determining protein MinC compare
Psyr_4887 -2.6 -11.9 Peptidase S41A, C-terminal protease compare
Psyr_0215 -2.6 -10.1 Exodeoxyribonuclease III xth compare
Psyr_0383 -2.5 -2.6 Twin-arginine translocation protein TatB compare
Psyr_4341 -2.4 -7.1 thiamine-phosphate diphosphorylase compare
Psyr_4115 -2.4 -3.5 phosphoheptose isomerase compare
Psyr_2196 -2.4 -3.3 Urease accessory protein UreG compare
Psyr_3214 -2.3 -7.6 Propeptide, PepSY amd peptidase M4 conserved
Psyr_1251 -2.1 -5.3 quinoprotein compare
Psyr_1910 -2.1 -4.5 VacJ-like lipoprotein compare
Psyr_0014 -2.1 -4.5 lipid A biosynthesis acyltransferase compare
Psyr_4019 -2.0 -3.5 H-NS family protein MvaT compare
Psyr_2084 -2.0 -4.4 transcriptional regulator, GntR family compare
Psyr_3020 -1.9 -2.6 precorrin-4 C11-methyltransferase compare
Psyr_2378 -1.9 -4.4 transcriptional regulator, TetR family compare
Psyr_1614 -1.9 -3.7 lipid A biosynthesis acyltransferase compare
Psyr_0831 -1.9 -3.1 Two-component response regulator CbrB compare
Psyr_3213 -1.8 -2.5 Propeptide, PepSY amd peptidase M4 compare
Psyr_2285 -1.7 -1.8 Twin-arginine translocation pathway signal compare
Psyr_4138 -1.7 -3.7 Toluene tolerance compare
Psyr_3806 -1.7 -4.0 hypothetical protein compare
Psyr_4683 -1.7 -4.7 dethiobiotin synthase compare
Psyr_4091 -1.7 -3.4 8-oxo-dGTPase compare
Psyr_2488 -1.6 -2.6 hypothetical protein compare
Psyr_0947 -1.6 -6.5 TPR repeat protein:TPR repeat protein compare
Psyr_1271 -1.6 -6.1 ErfK/YbiS/YcfS/YnhG compare
Psyr_1935 -1.6 -5.0 Protein of unknown function DUF796 compare
Psyr_2664 -1.6 -6.7 hypothetical protein compare
Psyr_0184 -1.6 -3.5 Protein of unknown function DUF484 compare
Psyr_2460 -1.6 -4.7 inner membrane peptidase, Serine peptidase, MEROPS family S49 compare
Psyr_4687 -1.6 -6.7 biotin synthase compare
Psyr_2462 -1.5 -4.6 Nitrite/sulfite reductase, hemoprotein beta-component, ferrodoxin-like:Nitrite and sulphite reductase 4Fe-4S region compare
Psyr_1931 -1.5 -4.3 hypothetical protein compare
Psyr_2642 -1.5 -4.7 hypothetical protein compare
Psyr_1543 -1.5 -6.7 Peptidase M48, Ste24p compare
Psyr_0255 -1.5 -2.4 glutamate-cysteine ligase compare
Psyr_1751 -1.5 -3.5 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_1924 -1.5 -4.2 hypothetical protein compare
Psyr_0863 -1.5 -4.1 PhnA protein compare
Psyr_3427 -1.5 -2.3 conserved hypothetical protein compare
Psyr_3258 -1.4 -3.5 conserved hypothetical protein compare
Psyr_3807 -1.4 -4.5 hypothetical protein compare
Psyr_4512 -1.4 -5.8 putative phage-related protein compare
Psyr_1460 -1.4 -3.5 hypothetical protein compare
Psyr_3805 -1.4 -1.9 hypothetical protein compare
Psyr_2151 -1.4 -1.4 monosaccharide ABC transporter substrate-binding protein, CUT2 family compare
Psyr_RNA61 -1.4 -4.7 tRNA-Gly compare
Psyr_2346 -1.4 -4.7 conserved hypothetical protein compare
Psyr_4920 -1.4 -2.4 conserved hypothetical bacteriophage protein compare
Psyr_4686 -1.4 -4.5 8-amino-7-oxononanoate synthase compare
Psyr_2854 -1.3 -3.7 conserved hypothetical protein compare
Psyr_0454 -1.3 -4.1 adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme compare
Psyr_3896 -1.3 -1.2 BFD-like [2Fe-2S]-binding region compare
Psyr_4139 -1.3 -4.3 Mce4/Rv3499c/MTV023.06c protein compare
Psyr_2562 -1.3 -1.6 hypothetical protein compare
Psyr_2848 -1.3 -3.2 hypothetical protein compare
Psyr_4362 -1.3 -2.4 Rare lipoprotein A compare
Psyr_2345 -1.3 -4.9 ea59 protein compare
Psyr_2088 -1.3 -1.9 2-methylaconitate cis-trans isomerase compare
Psyr_4684 -1.3 -3.2 biotin synthesis protein BioC compare
Psyr_1555 -1.3 -2.6 Cobyrinic acid a,c-diamide synthase compare
Psyr_2982 -1.3 -2.5 conserved hypothetical protein compare
Psyr_2182 -1.2 -3.8 hypothetical protein compare
Psyr_1585 -1.2 -5.5 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase A, N-terminal compare
Psyr_1832 -1.2 -2.8 Exonuclease compare
Psyr_3341 -1.2 -3.1 hypothetical protein compare
Psyr_0033 -1.2 -2.7 tryptophan synthase, alpha chain compare
Psyr_1269 -1.2 -3.4 phosphoribosylformylglycinamidine synthase compare
Psyr_1090 -1.2 -5.1 DNA polymerase III, chi subunit compare
Psyr_1408 -1.2 -2.3 Holliday junction endonuclease RuvC compare
Psyr_3694 -1.2 -4.2 MazG, bacterial compare
Psyr_4407 -1.2 -3.1 phosphoribosylamine--glycine ligase compare
Psyr_3581 -1.2 -5.5 ribosomal large subunit pseudouridine synthase B compare
Psyr_0395 -1.2 -3.1 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_2641 -1.2 -2.5 hypothetical protein compare
Psyr_1372 -1.2 -4.3 Protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psyr_2927 -1.2 -1.4 transcriptional regulator, TetR family compare
Psyr_2383 -1.2 -1.4 Protein of unknown function DUF72 compare
Psyr_2253 -1.1 -2.5 Phosphonate metabolism compare
Psyr_4141 -1.1 -3.9 ABC transporter compare
Psyr_3433 -1.1 -2.5 Protein-glutamate methylesterase compare
Psyr_3084 -1.1 -2.8 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_1280 -1.1 -3.5 Cytochrome c assembly protein compare
Psyr_0535 -1.1 -2.2 toluene tolerance protein, putative compare
Psyr_3728 -1.1 -4.1 hypothetical protein compare
Psyr_0938 -1.1 -6.4 hypothetical protein conserved
Psyr_3462 -1.1 -1.8 conserved hypothetical protein compare
Psyr_4089 -1.1 -4.9 PAS compare
Psyr_1553 -1.1 -3.8 hypothetical protein compare
Psyr_0475 -1.1 -2.3 Protein of unknown function YGGT compare
Psyr_2471 -1.1 -1.7 hydroxymethylglutaryl-CoA lyase compare
Psyr_1941 -1.1 -1.9 ATP-binding region, ATPase-like:Histidine kinase compare
Psyr_3547 -1.1 -3.2 transcriptional regulator, TetR family compare
Psyr_0259 -1.1 -2.2 Osmolarity sensor protein envZ compare
Psyr_3212 -1.1 -3.9 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_4978 -1.1 -2.8 hypothetical protein compare
Psyr_2067 -1.1 -1.6 ABC transporter compare
Psyr_2428 -1.0 -2.5 GCN5-related N-acetyltransferase compare
Psyr_0954 -1.0 -2.4 Protein of unknown function UPF0153 compare
Psyr_0464 -1.0 -2.8 hypothetical protein compare
Psyr_1321 -1.0 -4.0 conserved hypothetical protein compare
Psyr_4424 -1.0 -4.8 Propeptide, PepSY amd peptidase M4:PepSY-associated TM helix compare
Psyr_4012 -1.0 -3.3 Glutaconate CoA-transferase compare
Psyr_2552 -1.0 -1.9 cyclase/dehydrase compare
Psyr_0373 -1.0 -2.4 CDS compare
Psyr_2112 -1.0 -1.3 Protein with unknown function DUF469 compare
Psyr_3211 -1.0 -3.7 ATP-binding region, ATPase-like:Histidine kinase, HAMP region compare
Psyr_4830 -1.0 -1.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4159 -1.0 -4.8 RNAse G compare
Psyr_1864 -1.0 -3.1 spermidine synthase compare
Psyr_1599 -1.0 -5.9 C-terminal processing peptidase-1, Serine peptidase, MEROPS family S41A compare
Psyr_0294 -1.0 -3.0 Exopolyphosphatase compare
Psyr_3862 -1.0 -2.4 conserved hypothetical protein compare
Psyr_1702 -1.0 -3.3 regulatory protein, LuxR compare
Psyr_1748 -1.0 -3.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
Psyr_0849 -1.0 -5.4 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4418 -1.0 -1.4 Precorrin-6Y C5,15-methyltransferase (decarboxylating) compare
Psyr_3210 -1.0 -3.0 Protein of unknown function UPF0118 compare
Psyr_0822 -1.0 -1.1 1-phosphofructokinase compare
Psyr_2595 -1.0 -2.2 Dimethylmenaquinone methyltransferase compare
Psyr_2321 -1.0 -4.5 YD repeat protein compare
Psyr_3852 -1.0 -3.1 lipoprotein SlyB, putative compare
Psyr_4355 -1.0 -2.5 hypothetical protein compare
Psyr_2327 -1.0 -1.7 GTP cyclohydrolase subunit MoaA compare
Psyr_0137 -1.0 -1.3 outer membrane transport energization protein ExbD compare
Psyr_2140 -0.9 -2.5 conserved hypothetical protein compare
Psyr_1487 -0.9 -1.5 conserved hypothetical protein compare
Psyr_3342 -0.9 -1.0 conserved hypothetical protein compare
Psyr_0574 -0.9 -3.5 protease FtsH subunit HflK compare
Psyr_0648 -0.9 -3.5 transporter, putative compare
Psyr_2380 -0.9 -3.1 hypothetical protein compare
Psyr_0207 -0.9 -3.0 lipoprotein, putative compare
Psyr_3107 -0.9 -1.9 conserved hypothetical protein compare
Psyr_2601 -0.9 -3.2 regulatory protein, LuxR compare
Psyr_2869 -0.9 -2.9 xenobiotic compound monooxygenase, DszA family compare
Psyr_2651 -0.9 -3.7 conserved hypothetical protein compare
Psyr_4989 -0.9 -2.5 hypothetical protein compare
Psyr_1419 -0.9 -2.6 preQ(0) biosynthesis protein QueC compare
Psyr_2202 -0.9 -1.6 ABC transporter compare
Psyr_3104 -0.9 -1.5 phosphate ABC transporter membrane protein 2, PhoT family compare
Psyr_2030 -0.9 -1.6 Calcium-binding EF-hand compare
Psyr_2251 -0.9 -1.2 Phosphonate metabolism PhnG compare
Psyr_0239 -0.9 -2.4 cytochrome c5 compare
Psyr_1650 -0.9 -1.9 aminodeoxychorismate lyase apoprotein compare
Psyr_2527 -0.9 -2.7 GCN5-related N-acetyltransferase compare
Psyr_0734 -0.9 -2.6 Protein of unknown function DUF159 compare
Psyr_2628 -0.9 -1.8 ABC transporter compare
Psyr_1988 -0.9 -2.0 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_1094 -0.8 -1.3 cold-shock DNA-binding protein family compare
Psyr_4736 -0.8 -2.3 conserved hypothetical protein compare
Psyr_2538 -0.8 -1.4 Binding-protein-dependent transport systems inner membrane component compare
Psyr_2141 -0.8 -1.9 hypothetical protein compare
Psyr_1505 -0.8 -1.1 Protein of unknown function DUF156 compare
Psyr_2223 -0.8 -0.8 sarcosine oxidase, delta subunit compare
Psyr_3193 -0.8 -1.6 Transcription factor jumonji, jmjC compare
Psyr_1389 -0.8 -2.2 Protein of unknown function DUF1456 compare
Psyr_1889 -0.8 -2.6 type III effector HopH1 compare
Psyr_3179 -0.8 -1.5 DNA translocase FtsK compare
Psyr_2449 -0.8 -1.4 Response regulator receiver compare
Psyr_1378 -0.8 -1.2 RecA protein compare
Psyr_2171 -0.8 -1.5 HpcH/HpaI aldolase compare
Psyr_2351 -0.8 -2.0 tRNA synthetase, class-II (G, H, P and S) compare
Psyr_4517 -0.8 -3.8 SEC-C motif protein compare
Psyr_3090 -0.8 -1.4 hypothetical protein compare
Psyr_3586 -0.8 -2.1 Phosphoesterase PHP, N-terminal:PHP, C-terminal compare
Psyr_0928 -0.8 -4.7 hypothetical protein compare
Psyr_4996 -0.8 -3.5 hypothetical protein compare
Psyr_2857 -0.8 -2.2 conserved hypothetical protein compare
Psyr_3266 -0.8 -1.7 Oxidoreductase, N-terminal:Oxidoreductase, C-terminal compare
Psyr_0235 -0.8 -4.3 D-amino acid dehydrogenase small subunit compare
Psyr_1719 -0.8 -1.5 conserved hypothetical protein compare
Psyr_2337 -0.8 -1.5 conserved hypothetical protein compare
Psyr_2018 -0.8 -2.9 Dienelactone hydrolase compare
Psyr_2456 -0.8 -1.2 Short-chain dehydrogenase/reductase SDR compare
Psyr_0528 -0.8 -2.1 Carbamoyltransferase compare
Psyr_4014 -0.8 -4.3 regulatory protein, IclR compare
Psyr_4013 -0.8 -3.3 Glutaconate CoA-transferase compare
Psyr_3672 -0.8 -1.8 cobalamin-5'-phosphate synthase compare
Psyr_3419 -0.8 -2.3 4Fe-4S ferredoxin, iron-sulfur binding protein compare
Psyr_1458 -0.8 -2.0 hypothetical protein compare
Psyr_1616 -0.8 -1.9 Rieske [2Fe-2S] region compare
Psyr_4015 -0.8 -1.6 conserved domain protein compare
Psyr_1659 -0.8 -2.7 Protein of unknown function DUF1285 compare
Psyr_2499 -0.8 -2.4 Glutathione S-transferase, N-terminal:Glutathione S-transferase, C-terminal compare
Psyr_2069 -0.8 -1.4 conserved hypothetical protein compare
Psyr_0970 -0.8 -2.8 Phosphoribosyltransferase compare


Specific Phenotypes

For 15 genes in this experiment

For stress Novobiocin sodium salt in Pseudomonas syringae pv. syringae B728a

For stress Novobiocin sodium salt across organisms