Experiment set12IT029 for Pseudomonas syringae pv. syringae B728a

Compare to:

KB with Fusaric acid 250 ug/ml

200 most important genes:

  gene name fitness t score description  
Psyr_1613 -4.2 -6.3 septum site-determining protein MinC compare
Psyr_0475 -3.2 -3.1 Protein of unknown function YGGT compare
Psyr_4008 -2.5 -15.4 Hydrophobe/amphiphile efflux-1 HAE1 compare
Psyr_4015 -2.5 -2.5 conserved domain protein compare
Psyr_3013 -2.5 -2.1 magnesium chelatase subunit ChlD compare
Psyr_1268 -2.4 -8.8 extracellular solute-binding protein, family 3:SLT compare
Psyr_1719 -2.3 -2.8 conserved hypothetical protein compare
Psyr_0849 -2.3 -10.1 CDP-diacylglycerol--serine O-phosphatidyltransferase compare
Psyr_4203 -2.2 -1.5 SsrA-binding protein compare
Psyr_1930 -2.1 -2.9 hypothetical protein compare
Psyr_0574 -2.1 -6.4 protease FtsH subunit HflK compare
Psyr_4007 -2.1 -8.3 Secretion protein HlyD compare
Psyr_0259 -2.0 -3.3 Osmolarity sensor protein envZ compare
Psyr_3459 -2.0 -2.7 Helix-turn-helix, Fis-type compare
Psyr_4009 -1.9 -6.3 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_1832 -1.9 -3.9 Exonuclease compare
Psyr_2112 -1.9 -2.9 Protein with unknown function DUF469 compare
Psyr_2562 -1.7 -2.4 hypothetical protein compare
Psyr_4566 -1.7 -9.2 Peptidase M23B compare
Psyr_4754 -1.7 -2.5 16S rRNA m(2)G-966 methyltransferase compare
Psyr_3281 -1.7 -2.7 Glycoside hydrolase, family 3, N-terminal compare
Psyr_3808 -1.7 -1.3 hypothetical protein compare
Psyr_1751 -1.6 -3.7 PpiC-type peptidyl-prolyl cis-trans isomerase compare
Psyr_3831 -1.5 -8.5 ATP-dependent helicase HrpA compare
Psyr_0041 -1.5 -2.5 Protein of unknown function DUF1161 compare
Psyr_0014 -1.5 -3.3 lipid A biosynthesis acyltransferase compare
Psyr_4582 -1.5 -1.6 hypothetical protein compare
Psyr_1251 -1.5 -4.1 quinoprotein compare
Psyr_4112 -1.5 -7.7 Protein of unknown function UPF0011 compare
Psyr_4627 -1.4 -2.4 dimethyladenosine transferase compare
Psyr_0215 -1.4 -7.6 Exodeoxyribonuclease III xth compare
Psyr_2641 -1.4 -2.4 hypothetical protein compare
Psyr_2285 -1.4 -1.6 Twin-arginine translocation pathway signal compare
Psyr_1718 -1.4 -2.6 von Willebrand factor, type A compare
Psyr_1373 -1.4 -2.7 Peptidoglycan-binding LysM:Peptidase M23B compare
Psyr_1556 -1.4 -1.9 hypothetical protein compare
Psyr_0657 -1.4 -6.1 Drug resistance transporter Bcr/CflA subfamily compare
Psyr_1269 -1.3 -3.3 phosphoribosylformylglycinamidine synthase compare
Psyr_5132 -1.3 -2.1 Glucose-inhibited division protein A subfamily compare
Psyr_2897 -1.3 -4.3 regulatory protein, LuxR:Response regulator receiver compare
Psyr_1716 -1.3 -3.6 conserved hypothetical protein compare
Psyr_0376 -1.3 -4.0 D-tyrosyl-tRNA(Tyr) deacylase compare
Psyr_2345 -1.2 -4.5 ea59 protein compare
Psyr_0531 -1.2 -1.8 LmbE-like protein compare
Psyr_2848 -1.2 -3.4 hypothetical protein compare
Psyr_1317 -1.2 -1.6 conserved hypothetical protein compare
Psyr_1721 -1.2 -4.8 moxR protein, putative compare
Psyr_1097 -1.2 -1.2 glycine cleavage system H protein compare
Psyr_3116 -1.2 -2.8 transcriptional regulator, CdaR family compare
Psyr_1543 -1.2 -4.9 Peptidase M48, Ste24p compare
Psyr_3152 -1.2 -2.0 hypothetical protein compare
Psyr_4278 -1.2 -2.7 regulatory protein, LuxR compare
Psyr_2977 -1.2 -3.3 cointegrate resolution protein T compare
Psyr_4933 -1.2 -4.0 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase compare
Psyr_2620 -1.1 -2.2 RND efflux system, outer membrane lipoprotein, NodT compare
Psyr_3341 -1.1 -3.8 hypothetical protein compare
Psyr_3620 -1.1 -2.3 hypothetical protein compare
Psyr_1864 -1.1 -2.9 spermidine synthase compare
Psyr_4340 -1.1 -5.2 phosphomethylpyrimidine kinase, putative compare
Psyr_3213 -1.1 -2.2 Propeptide, PepSY amd peptidase M4 compare
Psyr_4581 -1.1 -2.1 anthranilate synthase, component II compare
Psyr_4178 -1.1 -4.6 tRNA pseudouridine synthase B compare
Psyr_4351 -1.1 -2.4 conserved domain protein compare
Psyr_0487 -1.1 -2.2 glutathione synthase compare
Psyr_0525 -1.1 -4.0 Lipopolysaccharide kinase compare
Psyr_1555 -1.1 -2.4 Cobyrinic acid a,c-diamide synthase compare
Psyr_2460 -1.1 -4.3 inner membrane peptidase, Serine peptidase, MEROPS family S49 compare
Psyr_3162 -1.0 -1.6 Metalloprotease inhibitor/calysin compare
Psyr_1720 -1.0 -2.8 Protein of unknown function DUF58 compare
Psyr_0951 -1.0 -2.0 UBA/THIF-type NAD/FAD binding fold:MoeZ/MoeB compare
Psyr_4995 -1.0 -2.5 RHS protein compare
Psyr_3040 -1.0 -3.1 conserved hypothetical protein compare
Psyr_3193 -1.0 -1.5 Transcription factor jumonji, jmjC compare
Psyr_3807 -1.0 -4.0 hypothetical protein compare
Psyr_1544 -1.0 -2.7 SirA-like protein compare
Psyr_1487 -1.0 -2.8 conserved hypothetical protein compare
Psyr_3867 -1.0 -1.2 hypothetical protein compare
Psyr_3806 -1.0 -3.3 hypothetical protein compare
Psyr_0202 -1.0 -4.5 transcriptional regulator, LysR family compare
Psyr_1746 -1.0 -4.2 Trigger factor compare
Psyr_5051 -1.0 -3.9 Aspartate ammonia-lyase compare
Psyr_2973 -0.9 -1.5 Glyoxalase I compare
Psyr_1934 -0.9 -3.0 conserved hypothetical protein compare
Psyr_0791 -0.9 -1.7 MOSC compare
Psyr_4716 -0.9 -2.4 Sarcosine oxidase, gamma subunit, heterotetrameric compare
Psyr_0579 -0.9 -5.5 RNAse R compare
Psyr_1935 -0.9 -3.4 Protein of unknown function DUF796 compare
Psyr_2635 -0.9 -2.7 conserved hypothetical protein compare
Psyr_4100 -0.9 -2.7 D-alanine--D-alanine ligase compare
Psyr_1226 -0.9 -1.5 hypothetical protein compare
Psyr_3581 -0.9 -2.8 ribosomal large subunit pseudouridine synthase B compare
Psyr_2062 -0.9 -1.4 DoxD-like family protein compare
Psyr_4300 -0.9 -2.2 DNA polymerase III, epsilon subunit compare
Psyr_2836 -0.9 -1.8 hypothetical protein compare
Psyr_0822 -0.9 -1.3 1-phosphofructokinase compare
Psyr_3107 -0.9 -1.4 conserved hypothetical protein compare
Psyr_4161 -0.8 -1.1 Rod shape-determining protein MreD compare
Psyr_3631 -0.8 -2.1 GreA/GreB family elongation factor compare
Psyr_2739 -0.8 -2.4 ThiJ/PfpI compare
Psyr_5029 -0.8 -1.7 Rubredoxin-type Fe(Cys)4 protein compare
Psyr_1614 -0.8 -1.8 lipid A biosynthesis acyltransferase compare
Psyr_1024 -0.8 -1.2 Flavodoxin/nitric oxide synthase compare
Psyr_3287 -0.8 -1.2 DNA topoisomerase I compare
Psyr_1970 -0.8 -1.5 Secretion protein HlyD compare
Psyr_3805 -0.8 -2.1 hypothetical protein compare
Psyr_2209 -0.8 -1.5 ABC transporter, substrate-binding protein, aliphatic sulfonate compare
Psyr_1410 -0.8 -2.9 Holliday junction DNA helicase RuvB compare
Psyr_2346 -0.8 -2.7 conserved hypothetical protein compare
Psyr_5135 -0.8 -1.2 Protein of unknown function DUF37 compare
Psyr_3616 -0.8 -3.4 Heat shock protein, Metallo peptidase, MEROPS family M48B compare
Psyr_4381 -0.8 -5.8 arginine decarboxylase compare
Psyr_1907 -0.8 -1.6 GTP cyclohydrolase I compare
Psyr_3698 -0.8 -3.1 Response regulator receiver:ATP-binding region, ATPase-like:Histidine kinase, HAMP region:Histidine kinase A, N-terminal:Hpt compare
Psyr_3672 -0.8 -1.7 cobalamin-5'-phosphate synthase compare
Psyr_2639 -0.8 -3.4 hypothetical protein compare
Psyr_1717 -0.8 -1.1 TPR repeat:von Willebrand factor, type A compare
Psyr_0735 -0.8 -1.4 Peptidase S24, S26A and S26B compare
Psyr_1988 -0.8 -2.0 2-keto-3-deoxy-phosphogalactonate aldolase compare
Psyr_0395 -0.8 -2.8 HslV component of HslUV peptidase, Threonine peptidase, MEROPS family T01B compare
Psyr_1667 -0.8 -2.4 Colicin V production protein compare
Psyr_2564 -0.8 -1.9 transcriptional regulator, GntR family compare
Psyr_0857 -0.8 -2.0 [SSU ribosomal protein S18P]-alanine acetyltransferase compare
Psyr_2642 -0.8 -2.4 hypothetical protein compare
Psyr_1924 -0.8 -2.7 hypothetical protein compare
Psyr_4455 -0.8 -1.7 conserved hypothetical protein compare
Psyr_3290 -0.8 -1.7 3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase compare
Psyr_3255 -0.8 -1.6 multisubunit potassium/proton antiporter, PhaE subunit compare
Psyr_4740 -0.7 -3.1 thiazole-phosphate synthase compare
Psyr_3627 -0.7 -1.1 OsmC-like protein compare
Psyr_2348 -0.7 -1.5 hypothetical protein compare
Psyr_0575 -0.7 -1.6 protease FtsH subunit HflC compare
Psyr_0907 -0.7 -1.2 conserved hypothetical protein compare
Psyr_1152 -0.7 -2.1 transcriptional regulator, ArsR family compare
Psyr_2844 -0.7 -1.7 hypothetical protein compare
Psyr_1638 -0.7 -2.0 RNAse E compare
Psyr_3164 -0.7 -3.8 Protein of unknown function UPF0005 compare
Psyr_3179 -0.7 -1.8 DNA translocase FtsK compare
Psyr_3473 -0.7 -1.9 Flagellar P-ring protein compare
Psyr_4040 -0.7 -2.6 putative cytoplasmic protein compare
Psyr_2143 -0.7 -1.4 delta1-piperideine 2-carboxylate reductase compare
Psyr_1458 -0.7 -1.5 hypothetical protein compare
Psyr_1431 -0.7 -2.1 hypothetical protein compare
Psyr_2200 -0.7 -1.1 UreE urease accessory, N-terminal compare
Psyr_1573 -0.7 -1.2 cyclic nucleotide-binding protein compare
Psyr_3640 -0.7 -1.9 conserved hypothetical protein compare
Psyr_4887 -0.7 -4.2 Peptidase S41A, C-terminal protease compare
Psyr_0541 -0.7 -1.3 Small multidrug resistance protein compare
Psyr_0402 -0.7 -5.3 Peptidoglycan glycosyltransferase compare
Psyr_3034 -0.7 -1.8 conserved hypothetical protein compare
Psyr_4978 -0.7 -1.8 hypothetical protein compare
Psyr_2663 -0.7 -2.8 hypothetical protein compare
Psyr_3111 -0.7 -1.8 transcriptional regulator, LysR family compare
Psyr_2182 -0.7 -2.1 hypothetical protein compare
Psyr_0838 -0.7 -1.4 Rieske [2Fe-2S] region compare
Psyr_4932 -0.7 -3.4 agmatine deiminase compare
Psyr_1009 -0.7 -1.6 Peptidylprolyl isomerase, FKBP-type compare
Psyr_3135 -0.7 -0.8 transcriptional regulator, GntR family compare
Psyr_0690 -0.7 -1.8 3-hydroxyisobutyrate dehydrogenase compare
Psyr_4341 -0.7 -3.2 thiamine-phosphate diphosphorylase compare
Psyr_3889 -0.7 -1.7 conserved hypothetical protein compare
Psyr_0978 -0.7 -2.5 lipoprotein, putative compare
Psyr_4979 -0.7 -2.6 hypothetical protein compare
Psyr_1529 -0.7 -3.3 hypothetical protein compare
Psyr_3665 -0.7 -1.4 conserved hypothetical protein compare
Psyr_0195 -0.7 -2.8 conserved hypothetical protein compare
Psyr_2253 -0.7 -1.2 Phosphonate metabolism compare
Psyr_2778 -0.7 -1.3 Phage minor tail protein L compare
Psyr_0918 -0.6 -4.2 ABC transporter compare
Psyr_0972 -0.6 -2.3 conserved hypothetical protein compare
Psyr_2481 -0.6 -1.3 thiol peroxidase (atypical 2-Cys peroxiredoxin) compare
Psyr_2375 -0.6 -1.7 Response regulator receiver:Transcriptional regulatory protein, C-terminal compare
Psyr_2619 -0.6 -2.4 diaminobutyrate aminotransferase apoenzyme compare
Psyr_3466 -0.6 -1.0 Flagellin, C-terminal:Flagellin, N-terminal compare
Psyr_0524 -0.6 -1.7 Lipopolysaccharide kinase compare
Psyr_4686 -0.6 -2.3 8-amino-7-oxononanoate synthase compare
Psyr_4057 -0.6 -2.2 regulatory protein, LysR:LysR, substrate-binding protein compare
Psyr_0863 -0.6 -2.5 PhnA protein compare
Psyr_1989 -0.6 -2.0 galactonate dehydratase compare
Psyr_0583 -0.6 -2.9 membrane protein, putative compare
Psyr_0385 -0.6 -1.7 phosphoribosyl-ATP pyrophosphatase compare
Psyr_4114 -0.6 -2.1 Protein of unknown function UPF0102 compare
Psyr_4752 -0.6 -2.4 Insulinase-like:Peptidase M16, C-terminal compare
Psyr_1689 -0.6 -1.6 conserved hypothetical protein compare
Psyr_4390 -0.6 -2.8 Flp pilus assembly CpaB compare
Psyr_4350 -0.6 -1.2 Protein of unknown function DUF218 compare
Psyr_4143 -0.6 -1.0 HAD-superfamily hydrolase, subfamily IIIA:Phosphatase YrbI compare
Psyr_4684 -0.6 -1.6 biotin synthesis protein BioC compare
Psyr_3089 -0.6 -4.4 Hemolysin-type calcium-binding region:hemolysin-type calcium binding related protein compare
Psyr_0265 -0.6 -3.8 N-acetylmuramoyl-L-alanine amidase, family 2 compare
Psyr_4861 -0.6 -2.5 Binding-protein-dependent transport systems inner membrane component compare
Psyr_4316 -0.6 -1.5 conserved hypothetical protein compare
Psyr_0576 -0.6 -1.7 ATP phosphoribosyltransferase regulatory subunit, putative compare
Psyr_3117 -0.6 -2.1 lipoprotein, putative compare
Psyr_3172 -0.6 -2.4 Glycosyl transferase, family 3 compare
Psyr_2804 -0.6 -2.0 hypothetical protein compare
Psyr_1236 -0.6 -1.4 transcriptional regulator, BadM/Rrf2 family compare
Psyr_3088 -0.6 -1.6 Glycosyl transferase, group 1 compare
Psyr_2842 -0.6 -3.0 hypothetical protein compare
Psyr_3954 -0.6 -1.8 GTP-binding protein LepA compare
Psyr_4116 -0.6 -0.9 Transport-associated protein compare


Specific Phenotypes

For 3 genes in this experiment

For stress Fusaric acid in Pseudomonas syringae pv. syringae B728a

For stress Fusaric acid across organisms