Experiment set12IT027 for Klebsiella michiganensis M5al

Compare to:

D-Glucose 120 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS16515 +0.9 3.1 LysR family transcriptional regulator compare
BWI76_RS24945 +0.9 1.6 glutamine amidotransferase compare
BWI76_RS11900 +0.8 1.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS24825 +0.8 1.5 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS13025 +0.8 3.7 histidine phosphatase family protein compare
BWI76_RS13160 +0.7 2.2 azoreductase compare
BWI76_RS02690 +0.7 2.7 hypothetical protein compare
BWI76_RS23705 +0.7 2.3 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS12070 +0.7 1.3 hypothetical protein compare
BWI76_RS04050 +0.7 3.2 hydroxamate siderophore iron reductase FhuF compare
BWI76_RS16210 +0.7 1.9 hypothetical protein compare
BWI76_RS06680 +0.7 1.1 hypothetical protein compare
BWI76_RS22840 +0.7 2.0 transposase compare
BWI76_RS16315 +0.6 1.4 SirA-like protein compare
BWI76_RS18375 +0.6 2.3 hypothetical protein compare
BWI76_RS12865 +0.6 2.4 acetylornithine deacetylase compare
BWI76_RS23020 +0.6 1.9 cobalamin biosynthesis protein CbiQ compare
BWI76_RS11770 +0.6 1.1 hypothetical protein compare
BWI76_RS11155 +0.6 1.7 penicillin-binding protein activator LpoB compare
BWI76_RS08110 +0.6 1.0 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS23255 +0.6 2.7 prepilin-type cleavage/methylation domain-containing protein compare
BWI76_RS09730 +0.6 0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS10400 +0.6 1.8 hypothetical protein compare
BWI76_RS15620 +0.6 1.5 hypothetical protein compare
BWI76_RS12170 +0.6 2.3 hypothetical protein compare
BWI76_RS07865 +0.6 2.3 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS12375 +0.6 2.2 DNA-invertase hin compare
BWI76_RS09520 +0.6 1.1 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS10430 +0.6 1.6 thiol:disulfide interchange protein DsbG compare
BWI76_RS16355 +0.6 2.0 electron transport complex subunit A compare
BWI76_RS16500 +0.6 1.4 superoxide dismutase [Fe] compare
BWI76_RS26045 +0.5 1.5 nitrite reductase small subunit compare
BWI76_RS13330 +0.5 1.2 tellurite resistance methyltransferase TehB compare
BWI76_RS10055 +0.5 1.6 AraC family transcriptional regulator compare
BWI76_RS23305 +0.5 2.6 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS16195 +0.5 1.5 hypothetical protein compare
BWI76_RS19585 +0.5 1.8 gentisate 1,2-dioxygenase compare
BWI76_RS20165 +0.5 2.8 NADH-quinone oxidoreductase subunit G compare
BWI76_RS16920 +0.5 1.4 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS27820 +0.5 1.1 ilvB operon leader peptide IvbL compare
BWI76_RS17280 +0.5 2.0 patatin family protein compare
BWI76_RS07385 +0.5 1.1 short-chain dehydrogenase/reductase SDR compare
BWI76_RS06375 +0.5 1.2 oxidoreductase compare
BWI76_RS18125 +0.5 1.5 murein DD-endopeptidase MepM compare
BWI76_RS09705 +0.5 1.7 transketolase compare
BWI76_RS17565 +0.5 1.3 hypothetical protein compare
BWI76_RS13070 +0.5 2.1 hypothetical protein compare
BWI76_RS18240 +0.5 1.1 L-arabinose ABC transporter permease AraH compare
BWI76_RS11605 +0.5 3.2 DNA topoisomerase III compare
BWI76_RS21245 +0.5 0.8 nitrogen regulatory protein P-II compare
BWI76_RS10945 +0.5 1.8 SecY/SecA suppressor protein compare
BWI76_RS11920 +0.5 1.5 hypothetical protein compare
BWI76_RS06465 +0.5 1.3 IclR family transcriptional regulator compare
BWI76_RS13240 +0.5 1.1 hypothetical protein compare
BWI76_RS19375 +0.5 0.9 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS18745 +0.5 1.9 adenosylhomocysteinase compare
BWI76_RS20720 +0.5 1.1 hypothetical protein compare
BWI76_RS14325 +0.5 2.1 maturase compare
BWI76_RS18335 +0.5 3.0 DNA-binding response regulator compare
BWI76_RS11980 +0.5 0.8 DeoR family transcriptional regulator compare
BWI76_RS11285 +0.5 1.2 transcriptional regulator compare
BWI76_RS22815 +0.5 3.5 hybrid sensor histidine kinase/response regulator compare
BWI76_RS01325 +0.5 1.3 twin-arginine translocase subunit TatB compare
BWI76_RS09195 +0.5 1.0 N-acetyltransferase compare
BWI76_RS20145 +0.5 1.3 NADH-quinone oxidoreductase subunit K compare
BWI76_RS20750 +0.5 0.9 carboxysome structural protein EutK compare
BWI76_RS07705 +0.5 1.8 enterochelin esterase compare
BWI76_RS01515 +0.5 2.8 PTS family cellobiose transporter subunit IIA compare
BWI76_RS18605 +0.5 0.8 oxidoreductase molybdopterin-binding protein compare
BWI76_RS07710 +0.5 2.6 invasin-like protein compare
BWI76_RS03295 +0.5 1.2 transposase compare
BWI76_RS14645 +0.5 2.7 sensor histidine kinase compare
BWI76_RS24750 +0.4 1.9 membrane protein compare
BWI76_RS15600 +0.4 1.3 hypothetical protein compare
BWI76_RS14305 +0.4 1.8 metallophosphoesterase compare
BWI76_RS17370 +0.4 1.5 nitrate transporter NasD compare
BWI76_RS06665 +0.4 0.8 membrane protein compare
BWI76_RS18550 +0.4 1.1 tRNA-Asn compare
BWI76_RS15975 +0.4 0.8 hypothetical protein compare
BWI76_RS21680 +0.4 1.3 antitoxin of the YeeV-YeeU toxin-antitoxin system compare
BWI76_RS15360 +0.4 1.6 hypothetical protein compare
BWI76_RS00440 +0.4 1.1 CopG family transcriptional regulator compare
BWI76_RS18780 +0.4 1.2 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS10900 +0.4 2.1 putative oxidoreductase compare
BWI76_RS23325 +0.4 1.4 hypothetical protein compare
BWI76_RS18810 +0.4 2.0 nitrogenase iron protein compare
BWI76_RS21390 +0.4 1.9 thiol disulfide reductase thioredoxin compare
BWI76_RS05185 +0.4 3.3 CdaR family transcriptional regulator compare
BWI76_RS19935 +0.4 1.1 hypothetical protein compare
BWI76_RS21715 +0.4 1.4 transcriptional regulator compare
BWI76_RS22095 +0.4 1.8 multidrug export protein EmrA compare
BWI76_RS23340 +0.4 1.5 transcriptional regulator compare
BWI76_RS26520 +0.4 1.9 nickel import ATP-binding protein NikE compare
BWI76_RS07955 +0.4 1.5 nucleoside diphosphate kinase regulator compare
BWI76_RS08375 +0.4 1.6 pyroglutamyl-peptidase I compare
BWI76_RS17085 +0.4 1.8 hypothetical protein compare
BWI76_RS14735 +0.4 1.9 type 11 methyltransferase compare
BWI76_RS24940 +0.4 1.3 hypothetical protein compare
BWI76_RS20280 +0.4 2.1 phosphodiesterase compare
BWI76_RS18905 +0.4 0.7 putrescine/spermidine ABC transporter compare
BWI76_RS10285 +0.4 1.4 family 3 extracellular solute-binding protein compare
BWI76_RS20890 +0.4 2.3 neutral zinc metallopeptidase compare
BWI76_RS15785 +0.4 1.1 replication protein compare
BWI76_RS22300 +0.4 1.3 hydrogenase 3 maturation endopeptidase HyCI compare
BWI76_RS01585 +0.4 1.0 transcriptional regulator compare
BWI76_RS14065 +0.4 1.1 hypothetical protein compare
BWI76_RS05445 +0.4 3.0 type 11 methyltransferase compare
BWI76_RS13715 +0.4 1.5 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS24270 +0.4 1.8 membrane protein compare
BWI76_RS25970 +0.4 1.6 hypothetical protein compare
BWI76_RS18070 +0.4 1.8 DNA polymerase III subunit epsilon compare
BWI76_RS21470 +0.4 1.9 gluconolaconase compare
BWI76_RS26245 +0.4 1.5 transcriptional regulator compare
BWI76_RS01350 +0.4 0.6 NAD(P)H-flavin reductase compare
BWI76_RS20390 +0.4 1.3 erythronate-4-phosphate dehydrogenase compare
BWI76_RS13250 +0.4 0.7 cytochrome b561 compare
BWI76_RS08625 +0.4 1.9 UDP-glucose 4-epimerase GalE compare
BWI76_RS02310 +0.4 1.6 transcriptional regulator compare
BWI76_RS24260 +0.4 1.1 hypothetical protein compare
BWI76_RS12780 +0.4 1.3 hypothetical protein compare
BWI76_RS14075 +0.4 0.9 TetR family transcriptional regulator compare
BWI76_RS05360 +0.4 2.5 methionine ABC transporter permease compare
BWI76_RS11035 +0.4 1.8 putative LysR-family transcriptional regulator compare
BWI76_RS09315 +0.4 1.2 hypothetical protein compare
BWI76_RS15190 +0.4 1.7 GGDEF domain-containing protein compare
BWI76_RS26150 +0.4 1.8 molecular chaperone Hsp33 compare
BWI76_RS16175 +0.4 1.9 p-aminobenzoyl-glutamate transporter compare
BWI76_RS24720 +0.4 1.6 hypothetical protein compare
BWI76_RS01835 +0.4 2.0 chemotaxis protein CheW compare
BWI76_RS22070 +0.4 1.1 proline/betaine ABC transporter permease ProW compare
BWI76_RS26830 +0.4 1.8 endoglucanase compare
BWI76_RS13030 +0.4 1.1 site-specific recombinase, phage integrase family protein compare
BWI76_RS10815 +0.4 1.3 iron permease compare
BWI76_RS08350 +0.4 0.8 carboxylase compare
BWI76_RS03825 +0.4 1.3 4-hydroxyphenylacetate 3-monooxygenase compare
BWI76_RS24525 +0.4 1.6 urease accessory protein UreG compare
BWI76_RS05680 +0.4 2.1 LacI family transcriptional regulator compare
BWI76_RS24130 +0.4 2.0 small integral C4-dicarboxylate membrane transporter compare
BWI76_RS23065 +0.4 2.5 cobalt-precorrin-6Y C(15)-methyltransferase compare
BWI76_RS18610 +0.4 1.8 transcriptional regulator LysR compare
BWI76_RS23185 +0.4 1.4 propanediol utilization: polyhedral bodies pduT compare
BWI76_RS16300 +0.4 0.9 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS07525 +0.4 2.1 ABC transporter permease compare
BWI76_RS14670 +0.4 0.7 hypothetical protein compare
BWI76_RS13660 +0.4 1.6 nitrate reductase subunit beta compare
BWI76_RS08750 +0.4 0.8 kinase inhibitor compare
BWI76_RS13665 +0.4 1.8 nitrate reductase subunit alpha compare
BWI76_RS18640 +0.4 2.4 helix-turn-helix transcriptional regulator compare
BWI76_RS19670 +0.4 1.3 S-formylglutathione hydrolase compare
BWI76_RS26750 +0.4 2.1 PfkB domain-containing protein compare
BWI76_RS16900 +0.4 1.5 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS07600 +0.4 1.4 aspartate aminotransferase family protein compare
BWI76_RS21090 +0.4 1.1 cytoskeletal protein RodZ compare
BWI76_RS18390 +0.4 1.3 hypothetical protein compare
BWI76_RS13370 +0.4 1.1 hypothetical protein compare
BWI76_RS03190 +0.4 0.8 hypothetical protein compare
BWI76_RS14615 +0.4 0.8 hypothetical protein compare
BWI76_RS07875 +0.4 2.3 dihydrofolate reductase compare
BWI76_RS05645 +0.4 1.0 fructuronate reductase compare
BWI76_RS19470 +0.4 1.1 DNA-binding response regulator compare
BWI76_RS00335 +0.4 1.5 hypothetical protein compare
BWI76_RS09750 +0.4 2.4 DUF421 domain-containing protein compare
BWI76_RS14225 +0.4 1.9 anti-ECF sigma factor ChrR compare
BWI76_RS09445 +0.4 1.3 NADPH-dependent oxidoreductase compare
BWI76_RS16235 +0.4 2.0 membrane protein compare
BWI76_RS16970 +0.3 2.0 murein L,D-transpeptidase compare
BWI76_RS19960 +0.3 1.5 MFS transporter compare
BWI76_RS26405 +0.3 0.5 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS17320 +0.3 1.5 respiratory nitrate reductase subunit gamma compare
BWI76_RS07795 +0.3 1.9 oxidoreductase compare
BWI76_RS01000 +0.3 1.3 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS15790 +0.3 1.6 replication protein compare
BWI76_RS24350 +0.3 1.6 quinol monooxygenase compare
BWI76_RS17940 +0.3 2.1 hypothetical protein compare
BWI76_RS09940 +0.3 0.9 paraquat-inducible protein B compare
BWI76_RS06405 +0.3 1.4 2-dehydropantoate 2-reductase compare
BWI76_RS11520 +0.3 0.6 hypothetical protein compare
BWI76_RS13210 +0.3 2.1 aldehyde dehydrogenase compare
BWI76_RS10070 +0.3 1.7 BAX inhibitor protein compare
BWI76_RS15980 +0.3 1.1 lysine transporter LysE compare
BWI76_RS12885 +0.3 1.1 hypothetical protein compare
BWI76_RS17955 +0.3 0.9 hypothetical protein compare
BWI76_RS03595 +0.3 0.8 ethanolamine utilization protein EutM compare
BWI76_RS01690 +0.3 1.6 membrane protein compare
BWI76_RS05080 +0.3 1.9 type II secretion protein F compare
BWI76_RS18355 +0.3 1.3 amino acid ABC transporter permease compare
BWI76_RS22975 +0.3 1.6 tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA compare
BWI76_RS18590 +0.3 2.1 DNA-binding response regulator compare
BWI76_RS11610 +0.3 1.3 glutamate dehydrogenase compare
BWI76_RS16935 +0.3 0.6 shikimate dehydrogenase compare
BWI76_RS21445 +0.3 1.4 hypothetical protein compare
BWI76_RS17310 +0.3 1.0 AsnC family transcriptional regulator compare
BWI76_RS02950 +0.3 2.4 6-phospho-beta-glucosidase compare
BWI76_RS11180 +0.3 1.4 hypothetical protein compare
BWI76_RS13775 +0.3 1.1 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS01380 +0.3 1.0 YigZ family protein compare
BWI76_RS15280 +0.3 2.0 sugar transporter compare
BWI76_RS15565 +0.3 1.8 hypothetical protein compare
BWI76_RS11190 +0.3 1.1 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS11170 +0.3 0.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source D-Glucose across organisms