Experiment set12IT026 for Klebsiella michiganensis M5al

Compare to:

D-Glucose 80 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS26405 +1.0 1.6 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS17400 +0.9 2.1 transporter compare
BWI76_RS20390 +0.9 1.9 erythronate-4-phosphate dehydrogenase compare
BWI76_RS08750 +0.9 2.2 kinase inhibitor compare
BWI76_RS21325 +0.9 2.8 hypothetical protein compare
BWI76_RS09730 +0.9 2.3 pyruvate formate lyase 1-activating protein compare
BWI76_RS08615 +0.9 3.7 galactokinase compare
BWI76_RS18605 +0.8 1.7 oxidoreductase molybdopterin-binding protein compare
BWI76_RS18070 +0.8 2.3 DNA polymerase III subunit epsilon compare
BWI76_RS23015 +0.8 2.2 cobalt transporter ATP-binding subunit compare
BWI76_RS00715 +0.7 3.2 two-component sensor histidine kinase compare
BWI76_RS15015 +0.7 1.8 DUF2132 domain-containing protein compare
BWI76_RS18225 +0.7 3.6 universal stress protein C compare
BWI76_RS18360 +0.7 1.3 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS11155 +0.7 1.4 penicillin-binding protein activator LpoB compare
BWI76_RS15600 +0.7 2.3 hypothetical protein compare
BWI76_RS07985 +0.7 1.3 fluoride ion transporter CrcB compare
BWI76_RS13525 +0.7 3.0 putative luciferase-like monooxygenase compare
BWI76_RS23125 +0.7 2.3 propanediol dehydratase small subunit compare
BWI76_RS11395 +0.6 2.4 RNA polymerase sigma factor FecI compare
BWI76_RS18230 +0.6 1.4 trehalose-6-phosphate synthase compare
BWI76_RS06680 +0.6 1.1 hypothetical protein compare
BWI76_RS25000 +0.6 1.5 malonate decarboxylase acyl carrier protein compare
BWI76_RS13095 +0.6 1.3 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS17180 +0.6 1.1 hypothetical protein compare
BWI76_RS01585 +0.6 2.2 transcriptional regulator compare
BWI76_RS23895 +0.6 1.3 Xaa-Pro aminopeptidase compare
BWI76_RS18885 +0.6 2.4 nitrogen fixation regulatory protein compare
BWI76_RS12170 +0.6 1.0 hypothetical protein compare
BWI76_RS08650 +0.6 2.2 molybdate ABC transporter permease compare
BWI76_RS14400 +0.6 3.3 ISNCY family transposase compare
BWI76_RS19145 +0.6 1.7 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS22815 +0.6 4.7 hybrid sensor histidine kinase/response regulator compare
BWI76_RS25375 +0.6 1.5 hypothetical protein compare
BWI76_RS24770 +0.6 1.6 hypothetical protein compare
BWI76_RS18780 +0.6 1.6 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS01185 +0.6 1.2 adenylate cyclase compare
BWI76_RS12895 +0.6 1.7 hypothetical protein compare
BWI76_RS16115 +0.6 3.4 fumarate hydratase compare
BWI76_RS15135 +0.6 2.4 hypothetical protein compare
BWI76_RS13965 +0.5 2.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS12520 +0.5 1.8 hypothetical protein compare
BWI76_RS16025 +0.5 2.2 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS08965 +0.5 1.7 glutamine ABC transporter ATP-binding protein compare
BWI76_RS22840 +0.5 1.6 transposase compare
BWI76_RS03045 +0.5 1.2 hypothetical protein compare
BWI76_RS15970 +0.5 1.6 carboxypeptidase M32 compare
BWI76_RS17955 +0.5 1.9 hypothetical protein compare
BWI76_RS12865 +0.5 2.7 acetylornithine deacetylase compare
BWI76_RS24720 +0.5 0.9 hypothetical protein compare
BWI76_RS24500 +0.5 2.0 urease subunit gamma compare
BWI76_RS26185 +0.5 1.6 thiosulfate sulfurtransferase compare
BWI76_RS01095 +0.5 1.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS13245 +0.5 2.0 DNA-damage-inducible protein I compare
BWI76_RS09305 +0.5 1.2 hypothetical protein compare
BWI76_RS08620 +0.5 2.5 galactose-1-phosphate uridylyltransferase compare
BWI76_RS13755 +0.5 0.8 hypothetical protein compare
BWI76_RS13050 +0.5 1.6 transcriptional regulator compare
BWI76_RS20145 +0.5 1.5 NADH-quinone oxidoreductase subunit K compare
BWI76_RS23310 +0.5 1.6 lysophospholipid transporter LplT compare
BWI76_RS15190 +0.5 2.1 GGDEF domain-containing protein compare
BWI76_RS18125 +0.5 1.3 murein DD-endopeptidase MepM compare
BWI76_RS07295 +0.5 2.8 6-phospho-beta-glucosidase compare
BWI76_RS13560 +0.5 0.9 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS07500 +0.5 2.8 RND transporter MFP subunit compare
BWI76_RS16200 +0.5 1.7 NAD(P) transhydrogenase subunit beta compare
BWI76_RS18375 +0.5 2.4 hypothetical protein compare
BWI76_RS05525 +0.5 1.5 glycerophosphodiester phosphodiesterase compare
BWI76_RS18335 +0.5 2.6 DNA-binding response regulator compare
BWI76_RS20785 +0.5 1.0 ethanolamine utilization protein EutJ compare
BWI76_RS15800 +0.5 1.9 transcriptional regulator compare
BWI76_RS02725 +0.5 0.9 HxlR family transcriptional regulator compare
BWI76_RS07970 +0.5 1.5 hypothetical protein compare
BWI76_RS22185 +0.5 1.6 hypothetical protein compare
BWI76_RS01595 +0.5 2.5 zinc resistance protein compare
BWI76_RS15565 +0.5 1.9 hypothetical protein compare
BWI76_RS15590 +0.5 1.7 hypothetical protein compare
BWI76_RS16455 +0.5 1.1 superoxide dismutase compare
BWI76_RS06235 +0.5 2.3 PAS domain-containing sensor histidine kinase compare
BWI76_RS23705 +0.5 1.5 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS22640 +0.5 1.6 hypothetical protein compare
BWI76_RS15745 +0.5 1.9 hypothetical protein compare
BWI76_RS24350 +0.5 2.3 quinol monooxygenase compare
BWI76_RS07325 +0.4 1.7 aminoimidazole riboside kinase compare
BWI76_RS16935 +0.4 0.8 shikimate dehydrogenase compare
BWI76_RS05070 +0.4 1.5 type II secretion system protein GspH compare
BWI76_RS10400 +0.4 1.9 hypothetical protein compare
BWI76_RS20730 +0.4 1.1 hypothetical protein compare
BWI76_RS13360 +0.4 2.0 benzoate transporter compare
BWI76_RS00505 +0.4 0.8 PTS system, sorbose-specific IIB component compare
BWI76_RS16195 +0.4 1.3 hypothetical protein compare
BWI76_RS25920 +0.4 0.9 peptidylprolyl isomerase compare
BWI76_RS21450 +0.4 1.2 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS13180 +0.4 0.9 multidrug transporter EmrA compare
BWI76_RS22850 +0.4 1.7 tRNA pseudouridine synthase TruC compare
BWI76_RS13240 +0.4 0.9 hypothetical protein compare
BWI76_RS11665 +0.4 1.8 exodeoxyribonuclease III compare
BWI76_RS20085 +0.4 2.2 GNAT family N-acetyltransferase compare
BWI76_RS25980 +0.4 1.7 hypothetical protein compare
BWI76_RS20050 +0.4 1.0 hypothetical protein compare
BWI76_RS19560 +0.4 1.6 beta-1,4-xylanase compare
BWI76_RS07855 +0.4 1.8 PucR family transcriptional regulator compare
BWI76_RS13545 +0.4 0.9 N-acetyltransferase compare
BWI76_RS08370 +0.4 1.3 membrane protein compare
BWI76_RS11335 +0.4 0.9 tautomerase compare
BWI76_RS21310 +0.4 0.7 DNA repair protein RecO compare
BWI76_RS01195 +0.4 1.3 membrane protein compare
BWI76_RS18025 +0.4 1.7 spore coat U domain-containing protein compare
BWI76_RS10575 +0.4 0.5 polar amino acid ABC transporter permease compare
BWI76_RS02090 +0.4 1.7 membrane protein compare
BWI76_RS16950 +0.4 1.6 TetR family transcriptional regulator compare
BWI76_RS21410 +0.4 1.5 lipoprotein compare
BWI76_RS23305 +0.4 1.9 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS17805 +0.4 0.9 membrane protein compare
BWI76_RS06375 +0.4 2.0 oxidoreductase compare
BWI76_RS19240 +0.4 1.0 ABC transporter substrate-binding protein compare
BWI76_RS24950 +0.4 1.8 hypothetical protein compare
BWI76_RS12465 +0.4 0.7 phage shock protein D compare
BWI76_RS02595 +0.4 1.3 hypothetical protein compare
BWI76_RS24525 +0.4 1.8 urease accessory protein UreG compare
BWI76_RS08590 +0.4 1.9 zinc transporter ZitB compare
BWI76_RS08355 +0.4 2.1 hypothetical protein compare
BWI76_RS10375 +0.4 1.3 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS11170 +0.4 0.8 hypothetical protein compare
BWI76_RS09540 +0.4 1.1 hypothetical protein compare
BWI76_RS15620 +0.4 1.0 hypothetical protein compare
BWI76_RS01995 +0.4 0.8 AraC family transcriptional regulator compare
BWI76_RS08330 +0.4 1.0 hypothetical protein compare
BWI76_RS12910 +0.4 2.0 3,4-dihydroxyphenylacetate 2,3-dioxygenase compare
BWI76_RS14515 +0.4 2.3 yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ compare
BWI76_RS27180 +0.4 2.4 hypothetical protein compare
BWI76_RS20750 +0.4 0.8 carboxysome structural protein EutK compare
BWI76_RS06560 +0.4 1.7 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS06190 +0.4 0.9 hypothetical protein compare
BWI76_RS27820 +0.4 0.7 ilvB operon leader peptide IvbL compare
BWI76_RS03190 +0.4 1.0 hypothetical protein compare
BWI76_RS08220 +0.4 2.3 PTS N-acetyl glucosamine transporter subunit IIABC compare
BWI76_RS14620 +0.4 1.4 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS18550 +0.4 0.9 tRNA-Asn compare
BWI76_RS07385 +0.4 0.7 short-chain dehydrogenase/reductase SDR compare
BWI76_RS09035 +0.4 2.1 protein tyrosine/serine phosphatase compare
BWI76_RS15315 +0.4 1.5 DNA-binding protein compare
BWI76_RS03760 +0.4 2.7 hypothetical protein compare
BWI76_RS01545 +0.4 1.2 thiamine biosynthesis protein ThiS compare
BWI76_RS01775 +0.4 0.7 hypothetical protein compare
BWI76_RS09625 +0.4 0.9 hypothetical protein compare
BWI76_RS24080 +0.4 0.8 DUF179 domain-containing protein compare
BWI76_RS23340 +0.4 1.1 transcriptional regulator compare
BWI76_RS23820 +0.4 1.5 flavodoxin FldB compare
BWI76_RS17945 +0.4 0.8 hypothetical protein compare
BWI76_RS13605 +0.4 1.9 porin compare
BWI76_RS04960 +0.4 1.2 carbonate dehydratase compare
BWI76_RS23690 +0.4 1.1 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS03415 +0.4 1.9 LacI family transcriptional regulator compare
BWI76_RS06065 +0.4 1.9 taurine ABC transporter substrate-binding protein compare
BWI76_RS13160 +0.4 1.1 azoreductase compare
BWI76_RS23680 +0.4 1.7 ribokinase compare
BWI76_RS22860 +0.4 2.1 SecY-interacting protein compare
BWI76_RS23215 +0.4 1.5 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS16645 +0.4 1.0 DeoR family transcriptional regulator compare
BWI76_RS14750 +0.4 2.0 transcriptional regulator compare
BWI76_RS27395 +0.4 1.4 hypothetical protein compare
BWI76_RS19490 +0.4 1.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS08655 +0.4 1.6 molybdenum ABC transporter ATP-binding protein compare
BWI76_RS09330 +0.4 1.6 baseplate assembly protein V compare
BWI76_RS14305 +0.4 1.2 metallophosphoesterase compare
BWI76_RS18485 +0.4 2.6 LysR family transcriptional regulator compare
BWI76_RS26290 +0.4 1.3 glycerol-3-phosphate ABC transporter ATP-binding protein compare
BWI76_RS01230 +0.4 2.5 chloramphenicol resistance permease RarD compare
BWI76_RS04060 +0.4 0.8 hypothetical protein compare
BWI76_RS01335 +0.4 1.4 DNase TatD compare
BWI76_RS15785 +0.4 1.5 replication protein compare
BWI76_RS13645 +0.4 1.3 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS16230 +0.4 1.3 dihydromonapterin reductase compare
BWI76_RS20830 +0.4 1.7 bifunctional malic enzyme oxidoreductase/phosphotransacetylase compare
BWI76_RS27200 +0.3 1.5 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS18425 +0.3 1.9 phosphohydrolase compare
BWI76_RS23040 +0.3 1.9 sirohydrochlorin cobaltochelatase compare
BWI76_RS05365 +0.3 2.2 D-methionine ABC transporter, ATP-binding protein compare
BWI76_RS22950 +0.3 1.3 membrane protein compare
BWI76_RS26755 +0.3 2.2 peptidase M16 compare
BWI76_RS15270 +0.3 1.4 phenazine biosynthesis protein PhzF family compare
BWI76_RS06325 +0.3 1.3 hypothetical protein compare
BWI76_RS05130 +0.3 2.2 iron-hydroxamate transporter ATP-binding subunit compare
BWI76_RS06665 +0.3 0.8 membrane protein compare
BWI76_RS18770 +0.3 0.7 DNA gyrase inhibitor compare
BWI76_RS14065 +0.3 0.7 hypothetical protein compare
BWI76_RS22855 +0.3 1.8 hypothetical protein compare
BWI76_RS04545 +0.3 2.1 two-component response regulator for citrate compare
BWI76_RS01515 +0.3 0.9 PTS family cellobiose transporter subunit IIA compare
BWI76_RS14865 +0.3 0.9 ribose ABC transporter permease compare
BWI76_RS26495 +0.3 2.2 LysR family transcriptional regulator compare
BWI76_RS14390 +0.3 0.6 hypothetical protein compare
BWI76_RS11770 +0.3 1.0 hypothetical protein compare
BWI76_RS10945 +0.3 1.2 SecY/SecA suppressor protein compare
BWI76_RS11255 +0.3 0.5 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS10680 +0.3 1.8 tartrate dehydrogenase compare
BWI76_RS13015 +0.3 1.7 LysR family transcriptional regulator compare
BWI76_RS15180 +0.3 1.8 altronate oxidoreductase compare
BWI76_RS17565 +0.3 1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source D-Glucose across organisms