Experiment set12IT020 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_glucose with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.5 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26085 -5.3 -3.7 3-dehydroquinate synthase compare
BWI76_RS18140 -5.1 -5.6 zinc ABC transporter permease compare
BWI76_RS18130 -5.1 -2.9 zinc ABC transporter substrate-binding protein compare
BWI76_RS00400 -4.9 -3.4 glutamine synthetase compare
BWI76_RS25230 -4.8 -7.3 phospholipid ABC transporter ATP-binding protein MlaF compare
BWI76_RS24400 -4.5 -6.9 outer membrane channel protein TolC compare
BWI76_RS04465 -4.5 -7.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23920 -4.5 -7.2 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21070 -4.4 -3.0 outer membrane protein assembly factor BamB compare
BWI76_RS17720 -4.4 -1.8 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS18135 -4.3 -5.9 zinc ABC transporter ATP-binding protein ZnuC compare
BWI76_RS23360 -4.3 -4.7 diaminopimelate decarboxylase compare
BWI76_RS20895 -4.3 -6.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS02530 -4.3 -2.9 tRNA dimethylallyltransferase compare
BWI76_RS19845 -4.2 -9.5 phosphatase compare
BWI76_RS07070 -4.2 -8.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04470 -4.2 -12.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS25225 -4.0 -6.3 ABC transporter permease compare
BWI76_RS23240 -3.9 -3.7 exonuclease V subunit gamma compare
BWI76_RS04160 -3.8 -6.4 phosphoserine phosphatase compare
BWI76_RS09755 -3.6 -12.3 phosphoserine transaminase compare
BWI76_RS20435 -3.6 -2.0 chorismate synthase compare
BWI76_RS20475 -3.5 -7.8 phospholipid-binding lipoprotein MlaA compare
BWI76_RS23220 -3.5 -9.8 amino-acid N-acetyltransferase compare
BWI76_RS26455 -3.5 -2.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04255 -3.4 -9.5 threonine synthase compare
BWI76_RS05015 -3.4 -3.0 transcriptional regulator compare
BWI76_RS20965 -3.3 -5.0 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26460 -3.3 -5.7 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26570 -3.2 -4.6 anion permease compare
BWI76_RS04250 -3.2 -9.1 homoserine kinase compare
BWI76_RS25215 -3.1 -10.5 phospholipid-binding protein MlaC compare
BWI76_RS25220 -3.0 -4.4 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS23230 -3.0 -4.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS01610 -3.0 -7.1 phosphoribosylamine--glycine ligase compare
BWI76_RS00855 -3.0 -7.2 argininosuccinate lyase compare
BWI76_RS01615 -3.0 -13.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09635 -3.0 -4.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS25115 -3.0 -7.2 argininosuccinate synthase compare
BWI76_RS18935 -3.0 -10.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS09660 -2.9 -2.0 DNA translocase FtsK compare
BWI76_RS01210 -2.9 -2.3 tyrosine recombinase XerC compare
BWI76_RS18940 -2.9 -6.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS04305 -2.9 -1.7 molecular chaperone DnaJ compare
BWI76_RS06775 -2.9 -14.1 multidrug efflux RND transporter permease subunit compare
BWI76_RS21265 -2.8 -16.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00805 -2.8 -7.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00845 -2.8 -10.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04530 -2.8 -2.6 peptidylprolyl isomerase SurA compare
BWI76_RS18950 -2.7 -4.6 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS05835 -2.7 -5.1 gamma-glutamyl-phosphate reductase compare
BWI76_RS00345 -2.7 -4.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS23480 -2.7 -11.8 EAL domain-containing protein compare
BWI76_RS27310 -2.7 -9.5 glycosyltransferase compare
BWI76_RS20350 -2.6 -9.1 amidophosphoribosyltransferase compare
BWI76_RS03010 -2.6 -7.3 ornithine carbamoyltransferase compare
BWI76_RS05840 -2.5 -5.9 glutamate 5-kinase compare
BWI76_RS00850 -2.5 -12.2 acetylglutamate kinase compare
BWI76_RS04675 -2.4 -3.9 3-isopropylmalate dehydrogenase compare
BWI76_RS23885 -2.4 -2.6 2-octaprenylphenol hydroxylase compare
BWI76_RS07065 -2.4 -7.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00835 -2.4 -11.4 phosphoenolpyruvate carboxylase compare
BWI76_RS27430 -2.3 -2.2 (p)ppGpp synthetase compare
BWI76_RS09760 -2.3 -4.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS06765 -2.3 -2.6 transcriptional regulator compare
BWI76_RS00975 -2.3 -8.9 dihydroxy-acid dehydratase compare
BWI76_RS04240 -2.3 -4.0 thr operon leader peptide compare
BWI76_RS06780 -2.2 -6.6 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS00990 -2.2 -8.5 ketol-acid reductoisomerase compare
BWI76_RS26200 -2.2 -6.3 starch synthase compare
BWI76_RS04245 -2.1 -13.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00980 -2.1 -11.5 PLP-dependent threonine dehydratase compare
BWI76_RS01330 -2.1 -5.1 twin-arginine translocase subunit TatC compare
BWI76_RS20355 -2.1 -5.5 colicin V production protein compare
BWI76_RS21350 -2.1 -2.2 anti-RNA polymerase sigma factor SigE compare
BWI76_RS18925 -2.0 -6.1 histidinol dehydrogenase compare
BWI76_RS18930 -2.0 -7.1 histidinol-phosphate transaminase compare
BWI76_RS00965 -2.0 -1.6 acetolactate synthase 2 small subunit compare
BWI76_RS08385 -1.9 -1.7 citrate (Si)-synthase compare
BWI76_RS20650 -1.9 -2.9 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS06770 -1.9 -9.7 Hha toxicity attenuator compare
BWI76_RS23265 -1.9 -3.2 hypothetical protein compare
BWI76_RS04670 -1.9 -10.1 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18955 -1.9 -6.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS04665 -1.9 -13.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS17975 -1.9 -3.6 tail-specific protease compare
BWI76_RS04680 -1.9 -11.0 2-isopropylmalate synthase compare
BWI76_RS09640 -1.9 -3.8 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS26390 -1.8 -5.7 cell division protein FtsX compare
BWI76_RS05200 -1.8 -2.3 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS19805 -1.8 -3.9 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS22805 -1.8 -9.6 GTP diphosphokinase compare
BWI76_RS09970 -1.8 -1.9 porin OmpA compare
BWI76_RS04685 -1.8 -7.9 putative leucine operon leader peptide compare
BWI76_RS18385 -1.8 -1.9 hypothetical protein compare
BWI76_RS08495 -1.8 -6.1 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS12070 -1.7 -1.5 hypothetical protein compare
BWI76_RS23365 -1.7 -4.6 LysR family transcriptional regulator compare
BWI76_RS11845 -1.7 -4.9 tryptophan synthase subunit beta compare
BWI76_RS05260 -1.7 -2.5 chaperone compare
BWI76_RS11965 -1.6 -5.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS11840 -1.6 -3.3 tryptophan synthase subunit alpha compare
BWI76_RS21475 -1.6 -3.2 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS01325 -1.6 -1.7 twin-arginine translocase subunit TatB compare
BWI76_RS04645 -1.6 -5.2 3-dehydroquinase compare
BWI76_RS11850 -1.5 -9.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS02995 -1.5 -6.4 aspartate carbamoyltransferase compare
BWI76_RS08500 -1.5 -2.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS00960 -1.5 -7.3 acetolactate synthase 2 catalytic subunit compare
BWI76_RS23895 -1.4 -1.4 Xaa-Pro aminopeptidase compare
BWI76_RS08525 -1.4 -2.8 colicin transporter compare
BWI76_RS26000 -1.4 -5.2 aspartate aminotransferase family protein compare
BWI76_RS21165 -1.4 -2.3 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS16975 -1.4 -2.8 cysteine desufuration protein SufE compare
BWI76_RS01350 -1.4 -1.2 NAD(P)H-flavin reductase compare
BWI76_RS21465 -1.4 -2.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS17980 -1.3 -3.2 RNA chaperone ProQ compare
BWI76_RS18065 -1.3 -2.2 DNA polymerase III subunit theta compare
BWI76_RS01275 -1.3 -7.0 LysR family transcriptional regulator compare
BWI76_RS14980 -1.3 -1.9 hypothetical protein compare
BWI76_RS01800 -1.3 -2.8 glucose-6-phosphate isomerase compare
BWI76_RS11855 -1.2 -4.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS24275 -1.2 -2.6 biopolymer transport protein ExbD compare
BWI76_RS27305 -1.2 -5.3 glycosyl transferase compare
BWI76_RS04605 -1.2 -1.6 thiamine ABC transporter ATP-binding protein compare
BWI76_RS18920 -1.2 -2.4 ATP phosphoribosyltransferase compare
BWI76_RS11860 -1.2 -4.5 anthranilate synthase component I compare
BWI76_RS10990 -1.2 -2.3 dihydroorotase compare
BWI76_RS25600 -1.1 -1.2 tRNA-Thr compare
BWI76_RS10475 -1.1 -4.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS11275 -1.1 -4.6 sensor protein PhoQ compare
BWI76_RS11820 -1.1 -1.4 short-chain dehydrogenase/reductase SDR compare
BWI76_RS11130 -1.1 -5.3 PTS glucose transporter subunit IIBC compare
BWI76_RS21075 -1.1 -1.0 membrane protein compare
BWI76_RS00355 -1.1 -2.9 DNA polymerase I compare
BWI76_RS16910 -1.1 -1.7 2-keto-4-pentenoate hydratase compare
BWI76_RS15835 -1.1 -1.4 hypothetical protein compare
BWI76_RS01085 -1.1 -4.5 polysaccharide chain length modulation protein compare
BWI76_RS25870 -1.1 -1.8 elongation factor Tu compare
BWI76_RS07725 -1.0 -1.3 iron-enterobactin transporter permease compare
BWI76_RS11255 -1.0 -1.6 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS00240 -1.0 -2.6 FMN-binding protein MioC compare
BWI76_RS27385 -1.0 -4.5 orotate phosphoribosyltransferase compare
BWI76_RS21000 -1.0 -4.7 exopolyphosphatase compare
BWI76_RS20155 -1.0 -2.5 NADH-quinone oxidoreductase subunit I compare
BWI76_RS17190 -1.0 -2.2 TonB system transport protein TonB compare
BWI76_RS17195 -1.0 -2.4 hypothetical protein compare
BWI76_RS18755 -1.0 -1.2 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS26475 -1.0 -4.2 bifunctional UDP-glucuronic acid oxidase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase compare
BWI76_RS18715 -1.0 -5.2 hypothetical protein compare
BWI76_RS06530 -1.0 -2.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS02190 -1.0 -1.9 ribose 1,5-bisphosphokinase compare
BWI76_RS24285 -1.0 -4.0 cystathionine beta-lyase compare
BWI76_RS26480 -1.0 -2.3 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS26485 -1.0 -6.2 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase compare
BWI76_RS20380 -1.0 -1.2 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS06525 -1.0 -3.1 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS25505 -1.0 -4.4 RNase E specificity factor CsrD compare
BWI76_RS22760 -1.0 -5.6 sulfite reductase subunit beta compare
BWI76_RS11440 -1.0 -1.2 hypothetical protein compare
BWI76_RS25065 -0.9 -2.0 polyribonucleotide nucleotidyltransferase compare
BWI76_RS13025 -0.9 -2.7 histidine phosphatase family protein compare
BWI76_RS04570 -0.9 -4.9 RNA polymerase-associated protein RapA compare
BWI76_RS04715 -0.9 -1.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS00565 -0.9 -2.6 branched-chain amino acid transport compare
BWI76_RS18165 -0.9 -1.2 NUDIX pyrophosphatase compare
BWI76_RS05350 -0.9 -4.9 Rcs stress response system protein RcsF compare
BWI76_RS26395 -0.9 -3.1 cell division protein FtsE compare
BWI76_RS27865 -0.9 -2.9 hypothetical protein compare
BWI76_RS18710 -0.9 -6.0 GGDEF-domain containing protein compare
BWI76_RS26665 -0.9 -2.8 DNA-binding response regulator compare
BWI76_RS00025 -0.9 -0.8 hypothetical protein compare
BWI76_RS13050 -0.9 -1.7 transcriptional regulator compare
BWI76_RS21580 -0.9 -1.3 SsrA-binding protein compare
BWI76_RS21140 -0.9 -1.5 molecular chaperone HscA compare
BWI76_RS16000 -0.9 -1.2 multidrug transporter subunit MdtI compare
BWI76_RS19840 -0.9 -1.2 hypothetical protein compare
BWI76_RS06740 -0.9 -2.1 50S ribosomal protein L36 compare
BWI76_RS11150 -0.9 -1.4 membrane protein compare
BWI76_RS05570 -0.9 -1.1 hypothetical protein compare
BWI76_RS24280 -0.9 -3.1 biopolymer transporter ExbB compare
BWI76_RS00940 -0.9 -5.1 transcriptional regulator HdfR compare
BWI76_RS09910 -0.8 -6.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS13645 -0.8 -1.1 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS08530 -0.8 -1.1 protein TolA compare
BWI76_RS16980 -0.8 -2.2 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS20740 -0.8 -1.9 coproporphyrinogen III oxidase compare
BWI76_RS16990 -0.8 -3.2 ABC transporter ATP-binding protein compare
BWI76_RS01090 -0.8 -4.1 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
BWI76_RS09650 -0.8 -4.0 hypothetical protein compare
BWI76_RS21565 -0.8 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS01885 -0.8 -1.1 CsbD family protein compare
BWI76_RS21395 -0.8 -1.9 DTW domain-containing protein compare
BWI76_RS22690 -0.8 -2.1 adenylyl-sulfate kinase compare
BWI76_RS20230 -0.8 -1.3 hypothetical protein compare
BWI76_RS12040 -0.8 -1.1 hypothetical protein compare
BWI76_RS05355 -0.8 -3.0 methionine ABC transporter substrate-binding protein MetQ compare
BWI76_RS13595 -0.8 -3.3 transcriptional regulator compare
BWI76_RS07160 -0.8 -1.8 MBL fold hydrolase compare
BWI76_RS17000 -0.8 -1.9 Fe-S cluster assembly scaffold SufA compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms