Experiment set12IT014 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most important genes:

  gene name fitness t score description  
BWI76_RS09660 -3.2 -2.1 DNA translocase FtsK compare
BWI76_RS17720 -3.0 -1.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS00400 -2.9 -2.5 glutamine synthetase compare
BWI76_RS21580 -2.6 -3.1 SsrA-binding protein compare
BWI76_RS23240 -2.5 -4.5 exonuclease V subunit gamma compare
BWI76_RS02530 -2.5 -2.7 tRNA dimethylallyltransferase compare
BWI76_RS23480 -2.3 -10.1 EAL domain-containing protein compare
BWI76_RS23265 -2.3 -3.3 hypothetical protein compare
BWI76_RS02410 -2.3 -1.5 EF-P beta-lysylation protein EpmB compare
BWI76_RS04160 -2.1 -9.7 phosphoserine phosphatase compare
BWI76_RS01200 -2.1 -2.1 diaminopimelate epimerase compare
BWI76_RS23920 -1.9 -5.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS01210 -1.8 -1.7 tyrosine recombinase XerC compare
BWI76_RS09970 -1.8 -1.9 porin OmpA compare
BWI76_RS26460 -1.6 -6.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS24585 -1.6 -2.6 glycerol dehydrogenase compare
BWI76_RS09755 -1.6 -6.0 phosphoserine transaminase compare
BWI76_RS17975 -1.6 -4.9 tail-specific protease compare
BWI76_RS26390 -1.6 -4.6 cell division protein FtsX compare
BWI76_RS26085 -1.5 -2.1 3-dehydroquinate synthase compare
BWI76_RS00390 -1.5 -4.2 two-component system sensor histidine kinase NtrB compare
BWI76_RS01885 -1.5 -1.6 CsbD family protein compare
BWI76_RS16485 -1.4 -2.2 ribonuclease T compare
BWI76_RS25505 -1.4 -6.0 RNase E specificity factor CsrD compare
BWI76_RS17675 -1.4 -2.3 hypothetical protein compare
BWI76_RS22690 -1.4 -3.4 adenylyl-sulfate kinase compare
BWI76_RS26570 -1.4 -2.9 anion permease compare
BWI76_RS00440 -1.4 -1.8 CopG family transcriptional regulator compare
BWI76_RS21130 -1.4 -2.4 Fe-S assembly protein IscX compare
BWI76_RS02680 -1.3 -2.1 EamA family transporter compare
BWI76_RS23360 -1.3 -2.4 diaminopimelate decarboxylase compare
BWI76_RS05235 -1.3 -1.3 hypothetical protein compare
BWI76_RS04465 -1.3 -4.6 carbamoyl-phosphate synthase small subunit compare
BWI76_RS23230 -1.3 -3.1 exodeoxyribonuclease V subunit beta compare
BWI76_RS04470 -1.2 -6.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS25425 -1.2 -1.9 arginine repressor compare
BWI76_RS20895 -1.2 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS19685 -1.2 -4.4 lysine transporter compare
BWI76_RS17155 -1.2 -1.4 hypothetical protein compare
BWI76_RS16895 -1.2 -2.0 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS26395 -1.2 -1.9 cell division protein FtsE compare
BWI76_RS08525 -1.2 -2.4 colicin transporter compare
BWI76_RS05200 -1.2 -2.4 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS06770 -1.1 -6.8 Hha toxicity attenuator compare
BWI76_RS18710 -1.1 -8.0 GGDEF-domain containing protein compare
BWI76_RS22765 -1.1 -6.4 sulfite reductase subunit alpha compare
BWI76_RS26455 -1.1 -3.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS21685 -1.1 -1.5 hypothetical protein compare
BWI76_RS00180 -1.1 -1.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS08520 -1.1 -2.0 colicin transporter TolQ compare
BWI76_RS25335 -1.1 -3.0 stringent starvation protein A compare
BWI76_RS15215 -1.1 -1.2 N-acetyltransferase compare
BWI76_RS11440 -1.1 -1.3 hypothetical protein compare
BWI76_RS01610 -1.1 -6.9 phosphoribosylamine--glycine ligase compare
BWI76_RS20380 -1.0 -1.3 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS06765 -1.0 -2.5 transcriptional regulator compare
BWI76_RS21375 -1.0 -1.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS00345 -1.0 -2.1 protein disulfide oxidoreductase DsbA compare
BWI76_RS22755 -1.0 -3.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20360 -1.0 -0.9 cell division protein DedD compare
BWI76_RS04570 -1.0 -5.7 RNA polymerase-associated protein RapA compare
BWI76_RS14770 -1.0 -1.4 PTS IIA 2 domain protein compare
BWI76_RS15680 -1.0 -1.4 hypothetical protein compare
BWI76_RS12145 -0.9 -1.7 hypothetical protein compare
BWI76_RS27385 -0.9 -3.8 orotate phosphoribosyltransferase compare
BWI76_RS18950 -0.9 -2.4 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21325 -0.9 -2.6 hypothetical protein compare
BWI76_RS07070 -0.9 -2.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS18715 -0.9 -3.9 hypothetical protein compare
BWI76_RS25060 -0.9 -2.8 lipoprotein NlpI compare
BWI76_RS08530 -0.9 -1.6 protein TolA compare
BWI76_RS10990 -0.9 -2.0 dihydroorotase compare
BWI76_RS23485 -0.9 -5.2 hypothetical protein compare
BWI76_RS22760 -0.9 -3.9 sulfite reductase subunit beta compare
BWI76_RS08645 -0.9 -2.1 molybdate ABC transporter substrate-binding protein compare
BWI76_RS06535 -0.9 -2.0 endopeptidase La compare
BWI76_RS00385 -0.9 -4.2 nitrogen assimilation regulatory protein compare
BWI76_RS26575 -0.9 -3.5 universal stress protein B compare
BWI76_RS00850 -0.9 -5.0 acetylglutamate kinase compare
BWI76_RS26665 -0.9 -2.9 DNA-binding response regulator compare
BWI76_RS27430 -0.9 -0.9 (p)ppGpp synthetase compare
BWI76_RS04320 -0.8 -3.4 transcriptional activator NhaR compare
BWI76_RS05640 -0.8 -1.9 GntR family transcriptional regulator compare
BWI76_RS19860 -0.8 -3.0 hypothetical protein compare
BWI76_RS02995 -0.8 -4.2 aspartate carbamoyltransferase compare
BWI76_RS25065 -0.8 -2.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS27165 -0.8 -2.5 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS06540 -0.8 -1.7 DNA-binding protein HU-beta compare
BWI76_RS21265 -0.8 -5.6 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00795 -0.8 -1.2 carboxymuconolactone decarboxylase compare
BWI76_RS26890 -0.8 -1.2 hypothetical protein compare
BWI76_RS01615 -0.8 -5.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS25485 -0.8 -1.2 septum formation protein Maf compare
BWI76_RS10530 -0.8 -1.4 GntR family transcriptional regulator with compare
BWI76_RS24400 -0.8 -3.3 outer membrane channel protein TolC compare
BWI76_RS14065 -0.8 -1.2 hypothetical protein compare
BWI76_RS07065 -0.8 -2.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04645 -0.8 -2.8 3-dehydroquinase compare
BWI76_RS21565 -0.8 -0.8 outer membrane protein assembly factor BamE compare
BWI76_RS25315 -0.8 -4.4 glutamate synthase large subunit compare
BWI76_RS10035 -0.8 -1.4 hypothetical protein compare
BWI76_RS13820 -0.8 -1.1 hypothetical protein compare
BWI76_RS11845 -0.8 -2.9 tryptophan synthase subunit beta compare
BWI76_RS23580 -0.7 -1.9 hypothetical protein compare
BWI76_RS12870 -0.7 -1.9 putative phytanoyl-CoA dioxygenase compare
BWI76_RS00855 -0.7 -3.2 argininosuccinate lyase compare
BWI76_RS11155 -0.7 -2.1 penicillin-binding protein activator LpoB compare
BWI76_RS20350 -0.7 -3.7 amidophosphoribosyltransferase compare
BWI76_RS03045 -0.7 -0.9 hypothetical protein compare
BWI76_RS06395 -0.7 -1.9 tRNA 4-thiouridine(8) synthase ThiI compare
BWI76_RS09635 -0.7 -1.4 amino acid ABC transporter ATP-binding protein compare
BWI76_RS27460 -0.7 -3.0 hypothetical protein compare
BWI76_RS02855 -0.7 -2.0 cytochrome B562 compare
BWI76_RS20650 -0.7 -1.7 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS11250 -0.7 -1.3 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS09760 -0.7 -2.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS21690 -0.7 -1.4 hypothetical protein compare
BWI76_RS07380 -0.7 -1.6 hypothetical protein compare
BWI76_RS21810 -0.7 -1.3 universal stress protein compare
BWI76_RS23745 -0.7 -1.5 arsenate reductase compare
BWI76_RS09910 -0.7 -5.9 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS18675 -0.7 -1.7 fimbrial protein compare
BWI76_RS23365 -0.7 -2.2 LysR family transcriptional regulator compare
BWI76_RS05120 -0.7 -3.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS27305 -0.7 -3.0 glycosyl transferase compare
BWI76_RS20355 -0.7 -1.9 colicin V production protein compare
BWI76_RS20930 -0.7 -1.5 arsenate reductase (glutaredoxin) compare
BWI76_RS09190 -0.7 -2.4 hypothetical protein compare
BWI76_RS01350 -0.7 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS06340 -0.7 -0.9 hypothetical protein compare
BWI76_RS10770 -0.7 -1.1 pyrimidine utilization protein C compare
BWI76_RS25115 -0.6 -4.2 argininosuccinate synthase compare
BWI76_RS17250 -0.6 -2.5 bifunctional acetaldehyde-CoA/alcohol dehydrogenase compare
BWI76_RS27600 -0.6 -2.2 tRNA-Sec compare
BWI76_RS23220 -0.6 -3.2 amino-acid N-acetyltransferase compare
BWI76_RS16000 -0.6 -1.0 multidrug transporter subunit MdtI compare
BWI76_RS22130 -0.6 -2.0 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS27225 -0.6 -1.9 rhodanese-like domain-containing protein compare
BWI76_RS24120 -0.6 -1.9 YggW family oxidoreductase compare
BWI76_RS00640 -0.6 -1.0 L-rhamnose mutarotase compare
BWI76_RS17235 -0.6 -2.8 peptide ABC transporter permease compare
BWI76_RS04305 -0.6 -0.6 molecular chaperone DnaJ compare
BWI76_RS12470 -0.6 -1.1 thiosulfate sulfurtransferase PspE compare
BWI76_RS05335 -0.6 -1.1 copper homeostasis/adhesion lipoprotein NlpE compare
BWI76_RS25870 -0.6 -1.1 elongation factor Tu compare
BWI76_RS19405 -0.6 -2.1 LysR family transcriptional regulator compare
BWI76_RS27310 -0.6 -2.9 glycosyltransferase compare
BWI76_RS11300 -0.6 -0.8 cupin compare
BWI76_RS18470 -0.6 -1.5 hypothetical protein compare
BWI76_RS03185 -0.6 -1.5 CI repressor compare
BWI76_RS22620 -0.6 -2.0 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS27440 -0.6 -1.9 DNA helicase RecG compare
BWI76_RS12550 -0.6 -1.4 hypothetical protein compare
BWI76_RS14680 -0.6 -2.0 SefF compare
BWI76_RS21345 -0.6 -1.8 sigma-E factor regulatory protein RseB compare
BWI76_RS20715 -0.6 -1.3 RpoE-regulated lipoprotein compare
BWI76_RS08500 -0.6 -1.9 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS20640 -0.6 -2.6 cysteine synthase A compare
BWI76_RS20490 -0.6 -1.3 hypothetical protein compare
BWI76_RS08535 -0.6 -1.1 translocation protein TolB compare
BWI76_RS00080 -0.6 -2.3 N-acetylmannosamine kinase compare
BWI76_RS24260 -0.6 -1.5 hypothetical protein compare
BWI76_RS11965 -0.6 -2.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01385 -0.6 -1.2 potassium transporter compare
BWI76_RS20965 -0.6 -1.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04255 -0.6 -3.0 threonine synthase compare
BWI76_RS27390 -0.6 -2.0 ribonuclease PH compare
BWI76_RS10535 -0.6 -2.0 Asp/Glu/hydantoin racemase compare
BWI76_RS25320 -0.6 -2.5 glutamate synthase compare
BWI76_RS06015 -0.6 -0.9 hypothetical protein compare
BWI76_RS05160 -0.6 -2.3 hypothetical protein compare
BWI76_RS00715 -0.6 -1.3 two-component sensor histidine kinase compare
BWI76_RS26775 -0.6 -2.5 endo-1,4-D-glucanase compare
BWI76_RS14320 -0.6 -1.6 hypothetical protein compare
BWI76_RS13730 -0.6 -1.5 hypothetical protein compare
BWI76_RS13560 -0.6 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS15835 -0.6 -0.8 hypothetical protein compare
BWI76_RS20435 -0.6 -0.9 chorismate synthase compare
BWI76_RS22805 -0.6 -3.4 GTP diphosphokinase compare
BWI76_RS02735 -0.6 -2.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS18930 -0.6 -1.5 histidinol-phosphate transaminase compare
BWI76_RS10745 -0.6 -0.8 hypothetical protein compare
BWI76_RS15765 -0.6 -2.1 hypothetical protein compare
BWI76_RS26055 -0.6 -2.9 siroheme synthase compare
BWI76_RS07640 -0.6 -1.0 short chain dehydrogenase compare
BWI76_RS18035 -0.6 -2.2 fimbrial chaperone compare
BWI76_RS22090 -0.6 -1.0 transcriptional regulator compare
BWI76_RS14050 -0.6 -1.1 AP endonuclease, family 2 compare
BWI76_RS24025 -0.6 -2.0 agmatinase compare
BWI76_RS05260 -0.5 -1.1 chaperone compare
BWI76_RS19215 -0.5 -1.1 proline-specific peptidase compare
BWI76_RS20375 -0.5 -1.3 membrane protein compare
BWI76_RS19885 -0.5 -1.3 multidrug ABC transporter permease/ATP-binding protein compare
BWI76_RS20310 -0.5 -2.4 hypothetical protein compare
BWI76_RS08260 -0.5 -1.7 LysR family transcriptional regulator compare
BWI76_RS01220 -0.5 -2.6 DNA-dependent helicase II compare
BWI76_RS03010 -0.5 -2.9 ornithine carbamoyltransferase compare
BWI76_RS23885 -0.5 -0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS19035 -0.5 -2.6 dTDP-rhamnosyl transferase compare
BWI76_RS16230 -0.5 -1.5 dihydromonapterin reductase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms