Experiment set12IT014 for Klebsiella michiganensis M5al

Compare to:

Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS25285 +1.3 2.2 HPr family phosphocarrier protein compare
BWI76_RS02180 +1.2 1.2 hypothetical protein compare
BWI76_RS04715 +1.2 2.5 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS12170 +1.1 1.4 hypothetical protein compare
BWI76_RS21505 +1.1 2.0 hypothetical protein compare
BWI76_RS08275 +1.0 2.7 LexA regulated protein compare
BWI76_RS18605 +1.0 2.7 oxidoreductase molybdopterin-binding protein compare
BWI76_RS16355 +0.9 1.9 electron transport complex subunit A compare
BWI76_RS17350 +0.9 4.6 DNA-binding response regulator compare
BWI76_RS23895 +0.9 1.1 Xaa-Pro aminopeptidase compare
BWI76_RS07255 +0.9 2.1 hypothetical protein compare
BWI76_RS16920 +0.9 1.5 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS14615 +0.8 1.9 hypothetical protein compare
BWI76_RS15315 +0.8 2.6 DNA-binding protein compare
BWI76_RS19700 +0.8 2.2 deoxyribonuclease IV compare
BWI76_RS13095 +0.8 1.5 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS17375 +0.8 3.0 nitrate ABC transporter, permease protein compare
BWI76_RS01995 +0.8 1.5 AraC family transcriptional regulator compare
BWI76_RS21075 +0.8 1.7 membrane protein compare
BWI76_RS16950 +0.7 2.2 TetR family transcriptional regulator compare
BWI76_RS20720 +0.7 0.8 hypothetical protein compare
BWI76_RS19850 +0.7 1.6 tRNA-Pro compare
BWI76_RS18410 +0.7 2.0 drug/metabolite exporter YedA compare
BWI76_RS18550 +0.7 1.6 tRNA-Asn compare
BWI76_RS14870 +0.7 1.2 hypothetical protein compare
BWI76_RS13380 +0.7 1.4 hypothetical protein compare
BWI76_RS15035 +0.7 1.8 metal ABC transporter permease compare
BWI76_RS15850 +0.7 1.0 DUF1317 domain-containing protein compare
BWI76_RS15205 +0.7 2.5 succinate-semialdehyde dehydrogenase compare
BWI76_RS21485 +0.7 4.3 DUF4154 domain-containing protein compare
BWI76_RS22350 +0.7 1.5 hydrogenase nickel incorporation protein HypB compare
BWI76_RS22200 +0.7 2.3 iron ABC transporter compare
BWI76_RS13965 +0.7 2.3 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS02775 +0.7 2.3 outer membrane protein assembly factor compare
BWI76_RS11150 +0.7 1.7 membrane protein compare
BWI76_RS08350 +0.6 2.2 carboxylase compare
BWI76_RS15190 +0.6 4.1 GGDEF domain-containing protein compare
BWI76_RS02725 +0.6 1.0 HxlR family transcriptional regulator compare
BWI76_RS09940 +0.6 1.1 paraquat-inducible protein B compare
BWI76_RS23705 +0.6 1.5 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS10500 +0.6 1.7 flavoprotein monooxygenase compare
BWI76_RS13685 +0.6 2.1 IclR family transcriptional regulator compare
BWI76_RS02860 +0.6 1.2 glycine dehydrogenase compare
BWI76_RS19495 +0.6 1.2 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS23025 +0.6 2.4 cobalt ABC transporter substrate-binding protein CbiN compare
BWI76_RS10040 +0.6 1.7 heat-shock protein HspQ compare
BWI76_RS27760 +0.6 1.9 lactam utilization protein LamB compare
BWI76_RS21980 +0.6 2.0 hypothetical protein compare
BWI76_RS09440 +0.6 2.0 hypothetical protein compare
BWI76_RS06075 +0.6 2.5 taurine transporter subunit compare
BWI76_RS07510 +0.6 2.0 hypothetical protein compare
BWI76_RS18125 +0.6 1.7 murein DD-endopeptidase MepM compare
BWI76_RS18360 +0.6 1.1 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS16505 +0.6 1.7 MFS transporter compare
BWI76_RS18845 +0.6 2.5 nitrogen fixation protein NifX compare
BWI76_RS16025 +0.6 0.8 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS11900 +0.6 1.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS23505 +0.6 5.2 ferrous iron transporter B compare
BWI76_RS17400 +0.6 1.0 transporter compare
BWI76_RS21245 +0.6 2.7 nitrogen regulatory protein P-II compare
BWI76_RS09490 +0.6 1.2 DNA-binding response regulator compare
BWI76_RS11170 +0.6 1.1 hypothetical protein compare
BWI76_RS23245 +0.6 1.6 hypothetical protein compare
BWI76_RS05015 +0.6 1.6 transcriptional regulator compare
BWI76_RS15915 +0.6 2.9 YnfC family lipoprotein compare
BWI76_RS26910 +0.6 2.1 hypothetical protein compare
BWI76_RS10830 +0.6 4.0 phosphate starvation-inducible protein PhoH compare
BWI76_RS23500 +0.6 5.0 hypothetical protein compare
BWI76_RS02815 +0.5 1.8 fructose-bisphosphatase class I compare
BWI76_RS01335 +0.5 1.9 DNase TatD compare
BWI76_RS24750 +0.5 2.4 membrane protein compare
BWI76_RS22815 +0.5 4.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS00965 +0.5 0.8 acetolactate synthase 2 small subunit compare
BWI76_RS23875 +0.5 1.8 glycine cleavage system protein H compare
BWI76_RS12585 +0.5 2.1 transcriptional regulator compare
BWI76_RS06290 +0.5 1.5 ACP phosphodiesterase compare
BWI76_RS08720 +0.5 1.0 imidazolonepropionase compare
BWI76_RS11335 +0.5 1.0 tautomerase compare
BWI76_RS20230 +0.5 1.1 hypothetical protein compare
BWI76_RS13370 +0.5 1.7 hypothetical protein compare
BWI76_RS04010 +0.5 2.0 hypothetical protein compare
BWI76_RS23285 +0.5 2.1 hypothetical protein compare
BWI76_RS19490 +0.5 1.9 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS12090 +0.5 1.8 HNH endonuclease compare
BWI76_RS07450 +0.5 1.2 transcriptional regulator compare
BWI76_RS02440 +0.5 1.0 fumarate reductase subunit D compare
BWI76_RS22070 +0.5 2.5 proline/betaine ABC transporter permease ProW compare
BWI76_RS19895 +0.5 2.5 bifunctional transcriptional regulator/O6-methylguanine-DNA methyltransferase compare
BWI76_RS13330 +0.5 1.1 tellurite resistance methyltransferase TehB compare
BWI76_RS12195 +0.5 1.8 hypothetical protein compare
BWI76_RS09690 +0.5 1.6 dimethyl sulfoxide reductase compare
BWI76_RS21490 +0.5 3.9 GGDEF domain-containing protein compare
BWI76_RS16075 +0.5 1.0 oxidoreductase compare
BWI76_RS02800 +0.5 2.4 ABC transporter compare
BWI76_RS00120 +0.5 1.9 glucosamine-6-phosphate deaminase compare
BWI76_RS16300 +0.5 1.3 bifunctional beta-cystathionase/maltose regulon regulatory protein compare
BWI76_RS10910 +0.5 2.1 hypothetical protein compare
BWI76_RS18335 +0.5 3.4 DNA-binding response regulator compare
BWI76_RS26095 +0.5 0.8 shikimate kinase compare
BWI76_RS02270 +0.5 1.9 DSBA oxidoreductase compare
BWI76_RS24650 +0.5 2.9 putative transport system permease component compare
BWI76_RS09100 +0.5 2.7 glutathione ABC transporter substrate-binding protein GsiB compare
BWI76_RS16680 +0.5 2.6 ABC transporter substrate-binding protein compare
BWI76_RS07810 +0.5 2.8 sugar ABC transporter periplasmic sugar-binding protein compare
BWI76_RS24885 +0.5 0.5 PTS galactitol transporter subunit IIB compare
BWI76_RS03515 +0.5 2.1 hypothetical protein compare
BWI76_RS15590 +0.5 1.7 hypothetical protein compare
BWI76_RS24525 +0.5 2.4 urease accessory protein UreG compare
BWI76_RS23820 +0.5 1.2 flavodoxin FldB compare
BWI76_RS27395 +0.5 2.0 hypothetical protein compare
BWI76_RS15360 +0.5 1.7 hypothetical protein compare
BWI76_RS17565 +0.5 0.8 hypothetical protein compare
BWI76_RS02820 +0.5 2.7 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BWI76_RS24925 +0.5 1.5 DnaA initiator-associating protein DiaA compare
BWI76_RS09165 +0.5 2.3 phosphatase YbjI compare
BWI76_RS03805 +0.5 2.8 porin compare
BWI76_RS15975 +0.5 0.8 hypothetical protein compare
BWI76_RS21890 +0.5 1.6 oxidoreductase compare
BWI76_RS12485 +0.5 2.6 TyrR family transcriptional regulator compare
BWI76_RS19535 +0.5 0.9 putative integral membrane protein compare
BWI76_RS04095 +0.5 1.4 dUMP phosphatase compare
BWI76_RS13660 +0.5 1.6 nitrate reductase subunit beta compare
BWI76_RS20735 +0.5 2.2 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS18300 +0.5 1.3 hypothetical protein compare
BWI76_RS07530 +0.5 1.9 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS09310 +0.5 1.7 hypothetical protein compare
BWI76_RS22640 +0.5 1.2 hypothetical protein compare
BWI76_RS25300 +0.5 1.2 hybrid sensor histidine kinase/response regulator compare
BWI76_RS23470 +0.5 3.7 hypothetical protein compare
BWI76_RS11380 +0.5 2.2 iron-dicitrate transporter substrate-binding subunit compare
BWI76_RS16165 +0.5 1.5 peptidase M20 compare
BWI76_RS06520 +0.5 2.0 trigger factor compare
BWI76_RS01540 +0.5 0.4 thiamine biosynthesis protein ThiS compare
BWI76_RS10655 +0.5 1.4 [formate-C-acetyltransferase]-activating enzyme compare
BWI76_RS01835 +0.5 2.3 chemotaxis protein CheW compare
BWI76_RS05050 +0.5 1.0 general secretion pathway protein GspL compare
BWI76_RS04055 +0.5 4.1 GGDEF domain-containing protein compare
BWI76_RS06050 +0.5 2.2 MFS transporter family glucose-6-phosphate receptor UhpC compare
BWI76_RS09830 +0.5 1.2 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM compare
BWI76_RS13240 +0.5 0.9 hypothetical protein compare
BWI76_RS16315 +0.5 1.0 SirA-like protein compare
BWI76_RS24010 +0.5 2.9 hypothetical protein compare
BWI76_RS13405 +0.5 1.6 spermidine/putrescine ABC transporter substrate-binding protein compare
BWI76_RS16935 +0.4 0.7 shikimate dehydrogenase compare
BWI76_RS11200 +0.4 1.4 transpeptidase compare
BWI76_RS11700 +0.4 0.8 hypothetical protein compare
BWI76_RS00725 +0.4 1.8 periplasmic repressor CpxP compare
BWI76_RS06745 +0.4 1.1 N-acetyltransferase GCN5 compare
BWI76_RS24810 +0.4 2.0 hypothetical protein compare
BWI76_RS06420 +0.4 2.4 oxidoreductase compare
BWI76_RS10510 +0.4 0.8 OHCU decarboxylase compare
BWI76_RS14835 +0.4 0.5 hypothetical protein compare
BWI76_RS13250 +0.4 0.8 cytochrome b561 compare
BWI76_RS08355 +0.4 1.9 hypothetical protein compare
BWI76_RS13775 +0.4 1.7 putative FMN-dependent luciferase-like monooxygenase compare
BWI76_RS21220 +0.4 2.3 membrane protein compare
BWI76_RS04560 +0.4 1.7 holo-ACP synthase CitX compare
BWI76_RS21450 +0.4 0.8 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS20830 +0.4 2.6 bifunctional malic enzyme oxidoreductase/phosphotransacetylase compare
BWI76_RS20155 +0.4 1.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS20145 +0.4 1.1 NADH-quinone oxidoreductase subunit K compare
BWI76_RS22850 +0.4 1.4 tRNA pseudouridine synthase TruC compare
BWI76_RS26635 +0.4 2.4 hypothetical protein compare
BWI76_RS27735 +0.4 0.9 hypothetical protein compare
BWI76_RS05870 +0.4 1.1 ABC transporter compare
BWI76_RS24070 +0.4 1.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS09655 +0.4 1.5 leucine-responsive regulatory protein compare
BWI76_RS08750 +0.4 0.8 kinase inhibitor compare
BWI76_RS02950 +0.4 2.3 6-phospho-beta-glucosidase compare
BWI76_RS10400 +0.4 1.4 hypothetical protein compare
BWI76_RS01805 +0.4 1.1 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS16515 +0.4 1.3 LysR family transcriptional regulator compare
BWI76_RS24215 +0.4 1.2 LysR family transcriptional regulator compare
BWI76_RS04605 +0.4 0.8 thiamine ABC transporter ATP-binding protein compare
BWI76_RS02580 +0.4 0.9 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS13715 +0.4 1.3 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS09025 +0.4 1.1 GntR family transcriptional regulator compare
BWI76_RS12275 +0.4 2.4 hypothetical protein compare
BWI76_RS24110 +0.4 1.0 YggU family protein compare
BWI76_RS04900 +0.4 1.8 DUF2950 domain-containing protein compare
BWI76_RS21740 +0.4 1.7 transcriptional regulator, LysR family protein compare
BWI76_RS05955 +0.4 2.1 ABC transporter compare
BWI76_RS18175 +0.4 1.7 hydrolase compare
BWI76_RS12825 +0.4 1.3 hypothetical protein compare
BWI76_RS07545 +0.4 1.7 amidase compare
BWI76_RS18600 +0.4 2.1 HupC/HyaC/HydC family protein compare
BWI76_RS25035 +0.4 1.7 malonate transporter subunit MadM compare
BWI76_RS00505 +0.4 1.5 PTS system, sorbose-specific IIB component compare
BWI76_RS18425 +0.4 2.0 phosphohydrolase compare
BWI76_RS25905 +0.4 1.3 hypothetical protein compare
BWI76_RS23575 +0.4 2.4 hypothetical protein compare
BWI76_RS04260 +0.4 1.4 peroxide stress protein YaaA compare
BWI76_RS20915 +0.4 2.5 peroxiredoxin compare
BWI76_RS15350 +0.4 0.8 hypothetical protein compare
BWI76_RS06830 +0.4 1.4 recombination protein RecR compare
BWI76_RS06030 +0.4 2.9 homocysteine S-methyltransferase compare
BWI76_RS05425 +0.4 1.7 EEP domain-containing protein compare
BWI76_RS01775 +0.4 0.6 hypothetical protein compare
BWI76_RS23690 +0.4 1.1 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS16210 +0.4 1.0 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in supernatant experiments

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms