Experiment set12IT011 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with D-Glucose

200 most important genes:

  gene name fitness t score description  
BWI76_RS07070 -5.7 -6.8 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS26085 -5.3 -3.6 3-dehydroquinate synthase compare
BWI76_RS20895 -5.2 -6.1 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04160 -4.6 -9.1 phosphoserine phosphatase compare
BWI76_RS17720 -4.5 -2.0 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS23920 -4.5 -4.7 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04470 -4.1 -13.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS01210 -4.1 -3.5 tyrosine recombinase XerC compare
BWI76_RS27385 -4.0 -7.9 orotate phosphoribosyltransferase compare
BWI76_RS04465 -3.9 -5.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS01615 -3.8 -10.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09755 -3.8 -12.0 phosphoserine transaminase compare
BWI76_RS23360 -3.7 -5.0 diaminopimelate decarboxylase compare
BWI76_RS20435 -3.6 -2.2 chorismate synthase compare
BWI76_RS02995 -3.6 -10.9 aspartate carbamoyltransferase compare
BWI76_RS23365 -3.6 -8.0 LysR family transcriptional regulator compare
BWI76_RS23240 -3.5 -4.1 exonuclease V subunit gamma compare
BWI76_RS21265 -3.5 -12.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00400 -3.5 -2.4 glutamine synthetase compare
BWI76_RS07065 -3.4 -6.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS11965 -3.3 -5.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS20350 -3.3 -9.1 amidophosphoribosyltransferase compare
BWI76_RS04645 -3.2 -7.3 3-dehydroquinase compare
BWI76_RS01610 -3.1 -7.0 phosphoribosylamine--glycine ligase compare
BWI76_RS05840 -3.0 -6.0 glutamate 5-kinase compare
BWI76_RS20965 -3.0 -7.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS09760 -2.9 -7.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23230 -2.9 -4.0 exodeoxyribonuclease V subunit beta compare
BWI76_RS08385 -2.8 -3.4 citrate (Si)-synthase compare
BWI76_RS09910 -2.7 -16.1 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04255 -2.7 -10.1 threonine synthase compare
BWI76_RS02735 -2.7 -6.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS18920 -2.7 -4.6 ATP phosphoribosyltransferase compare
BWI76_RS05835 -2.7 -3.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS00835 -2.6 -10.3 phosphoenolpyruvate carboxylase compare
BWI76_RS18940 -2.6 -4.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS22755 -2.6 -8.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20355 -2.6 -4.2 colicin V production protein compare
BWI76_RS18930 -2.6 -8.5 histidinol-phosphate transaminase compare
BWI76_RS18950 -2.5 -6.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21475 -2.5 -5.3 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18935 -2.4 -7.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS22765 -2.4 -9.4 sulfite reductase subunit alpha compare
BWI76_RS04250 -2.3 -8.3 homoserine kinase compare
BWI76_RS10990 -2.3 -4.1 dihydroorotase compare
BWI76_RS25115 -2.3 -7.4 argininosuccinate synthase compare
BWI76_RS00855 -2.2 -9.0 argininosuccinate lyase compare
BWI76_RS04525 -2.2 -2.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS22760 -2.2 -7.4 sulfite reductase subunit beta compare
BWI76_RS18925 -2.2 -7.7 histidinol dehydrogenase compare
BWI76_RS00850 -2.1 -10.3 acetylglutamate kinase compare
BWI76_RS00990 -2.1 -7.5 ketol-acid reductoisomerase compare
BWI76_RS00975 -2.0 -10.9 dihydroxy-acid dehydratase compare
BWI76_RS05015 -1.9 -2.0 transcriptional regulator compare
BWI76_RS22690 -1.9 -4.2 adenylyl-sulfate kinase compare
BWI76_RS27390 -1.9 -2.9 ribonuclease PH compare
BWI76_RS00845 -1.9 -6.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS16955 -1.9 -1.8 hypothetical protein compare
BWI76_RS18955 -1.9 -3.6 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS04245 -1.8 -11.2 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS02580 -1.8 -2.1 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS03010 -1.8 -7.9 ornithine carbamoyltransferase compare
BWI76_RS23220 -1.8 -8.0 amino-acid N-acetyltransferase compare
BWI76_RS00345 -1.8 -4.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS26000 -1.7 -8.2 aspartate aminotransferase family protein compare
BWI76_RS15835 -1.7 -1.6 hypothetical protein compare
BWI76_RS26425 -1.6 -10.0 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS20650 -1.6 -3.0 phosphoenolpyruvate--protein phosphotransferase compare
BWI76_RS02530 -1.6 -1.8 tRNA dimethylallyltransferase compare
BWI76_RS02410 -1.6 -1.5 EF-P beta-lysylation protein EpmB compare
BWI76_RS24285 -1.6 -7.0 cystathionine beta-lyase compare
BWI76_RS21580 -1.6 -2.3 SsrA-binding protein compare
BWI76_RS26570 -1.6 -2.7 anion permease compare
BWI76_RS04305 -1.6 -1.4 molecular chaperone DnaJ compare
BWI76_RS05260 -1.5 -2.5 chaperone compare
BWI76_RS21465 -1.5 -4.5 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS05200 -1.5 -2.5 bifunctional uridylyltransferase/uridylyl-removing protein compare
BWI76_RS00980 -1.5 -8.2 PLP-dependent threonine dehydratase compare
BWI76_RS25700 -1.5 -9.0 heavy metal-responsive transcriptional regulator compare
BWI76_RS04530 -1.5 -1.8 peptidylprolyl isomerase SurA compare
BWI76_RS00180 -1.4 -1.6 F0F1 ATP synthase subunit epsilon compare
BWI76_RS25645 -1.4 -5.1 shikimate dehydrogenase compare
BWI76_RS20640 -1.4 -4.3 cysteine synthase A compare
BWI76_RS11235 -1.4 -1.7 hypothetical protein compare
BWI76_RS23265 -1.4 -3.4 hypothetical protein compare
BWI76_RS17980 -1.4 -2.7 RNA chaperone ProQ compare
BWI76_RS09635 -1.3 -3.2 amino acid ABC transporter ATP-binding protein compare
BWI76_RS04240 -1.3 -2.6 thr operon leader peptide compare
BWI76_RS26055 -1.3 -5.4 siroheme synthase compare
BWI76_RS04680 -1.3 -7.6 2-isopropylmalate synthase compare
BWI76_RS00805 -1.3 -3.5 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS11250 -1.3 -2.7 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS22805 -1.3 -6.0 GTP diphosphokinase compare
BWI76_RS17530 -1.2 -2.6 hypothetical protein compare
BWI76_RS08525 -1.2 -2.0 colicin transporter compare
BWI76_RS17565 -1.2 -2.3 hypothetical protein compare
BWI76_RS02680 -1.2 -1.8 EamA family transporter compare
BWI76_RS19840 -1.2 -1.6 hypothetical protein compare
BWI76_RS07645 -1.2 -2.2 short-chain dehydrogenase/reductase compare
BWI76_RS16895 -1.2 -2.4 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS20390 -1.2 -3.0 erythronate-4-phosphate dehydrogenase compare
BWI76_RS24075 -1.2 -3.5 glutathione synthase compare
BWI76_RS26395 -1.2 -3.8 cell division protein FtsE compare
BWI76_RS27760 -1.2 -3.5 lactam utilization protein LamB compare
BWI76_RS04665 -1.1 -9.0 3-isopropylmalate dehydratase small subunit compare
BWI76_RS06675 -1.1 -5.7 nickel/cobalt efflux protein RcnA compare
BWI76_RS21070 -1.1 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS04670 -1.1 -5.2 3-isopropylmalate dehydratase large subunit compare
BWI76_RS14825 -1.1 -3.1 dienelactone hydrolase family protein compare
BWI76_RS09660 -1.1 -1.3 DNA translocase FtsK compare
BWI76_RS23530 -1.1 -2.4 MarR family transcriptional regulator compare
BWI76_RS01280 -1.1 -6.7 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase compare
BWI76_RS04685 -1.0 -4.1 putative leucine operon leader peptide compare
BWI76_RS11860 -1.0 -3.9 anthranilate synthase component I compare
BWI76_RS05450 -1.0 -1.2 ribonuclease HI compare
BWI76_RS14435 -1.0 -1.3 glutamine ABC transporter ATP-binding protein compare
BWI76_RS11255 -1.0 -2.0 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS11335 -1.0 -1.4 tautomerase compare
BWI76_RS04675 -1.0 -2.7 3-isopropylmalate dehydrogenase compare
BWI76_RS16490 -1.0 -2.2 glutaredoxin compare
BWI76_RS20155 -1.0 -2.3 NADH-quinone oxidoreductase subunit I compare
BWI76_RS01900 -1.0 -4.0 tRNA-dihydrouridine synthase A compare
BWI76_RS09645 -1.0 -1.1 thioredoxin-disulfide reductase compare
BWI76_RS21310 -1.0 -1.0 DNA repair protein RecO compare
BWI76_RS11855 -1.0 -5.1 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS00960 -1.0 -4.5 acetolactate synthase 2 catalytic subunit compare
BWI76_RS09195 -0.9 -1.2 N-acetyltransferase compare
BWI76_RS19845 -0.9 -2.7 phosphatase compare
BWI76_RS01275 -0.9 -4.9 LysR family transcriptional regulator compare
BWI76_RS20375 -0.9 -1.8 membrane protein compare
BWI76_RS17185 -0.9 -1.2 fructosamine kinase family protein compare
BWI76_RS17975 -0.9 -2.8 tail-specific protease compare
BWI76_RS19480 -0.9 -2.7 transcriptional regulator compare
BWI76_RS11610 -0.9 -2.2 glutamate dehydrogenase compare
BWI76_RS01655 -0.9 -5.3 homoserine O-succinyltransferase compare
BWI76_RS00750 -0.9 -3.5 ATP-dependent protease ATP-binding subunit HslU compare
BWI76_RS15825 -0.9 -1.0 hypothetical protein compare
BWI76_RS25220 -0.9 -2.9 outer membrane lipid asymmetry maintenance protein MlaD compare
BWI76_RS26775 -0.9 -3.4 endo-1,4-D-glucanase compare
BWI76_RS13955 -0.9 -2.4 hypothetical protein compare
BWI76_RS26390 -0.9 -3.4 cell division protein FtsX compare
BWI76_RS21480 -0.9 -4.1 phospho-2-dehydro-3-deoxyheptonate aldolase compare
BWI76_RS11845 -0.9 -3.1 tryptophan synthase subunit beta compare
BWI76_RS25315 -0.9 -5.9 glutamate synthase large subunit compare
BWI76_RS24945 -0.9 -0.9 glutamine amidotransferase compare
BWI76_RS12390 -0.8 -2.1 antibiotic biosynthesis monooxygenase compare
BWI76_RS19685 -0.8 -3.0 lysine transporter compare
BWI76_RS14155 -0.8 -2.3 transketolase compare
BWI76_RS25905 -0.8 -2.1 hypothetical protein compare
BWI76_RS24825 -0.8 -1.8 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS09615 -0.8 -1.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS13590 -0.8 -1.3 hypothetical protein compare
BWI76_RS17525 -0.8 -1.0 XshC-Cox1-family protein compare
BWI76_RS26075 -0.8 -1.9 DNA adenine methylase compare
BWI76_RS03835 -0.8 -1.7 4-hydroxyphenylacetate catabolism regulatory protein HpaA compare
BWI76_RS01200 -0.8 -1.1 diaminopimelate epimerase compare
BWI76_RS00875 -0.8 -2.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS20360 -0.8 -0.9 cell division protein DedD compare
BWI76_RS14615 -0.8 -1.3 hypothetical protein compare
BWI76_RS00785 -0.8 -3.8 cystathionine gamma-synthase compare
BWI76_RS25320 -0.8 -3.2 glutamate synthase compare
BWI76_RS27820 -0.8 -0.9 ilvB operon leader peptide IvbL compare
BWI76_RS17200 -0.8 -1.4 hypothetical protein compare
BWI76_RS05945 -0.8 -2.0 amino acid ABC transporter permease compare
BWI76_RS19870 -0.8 -2.3 malate:quinone oxidoreductase compare
BWI76_RS12340 -0.8 -2.6 molecular chaperone Tir compare
BWI76_RS05120 -0.8 -4.2 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS06190 -0.7 -1.2 hypothetical protein compare
BWI76_RS26980 -0.7 -1.1 cold-shock protein compare
BWI76_RS14980 -0.7 -1.7 hypothetical protein compare
BWI76_RS11840 -0.7 -1.5 tryptophan synthase subunit alpha compare
BWI76_RS01105 -0.7 -2.5 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS06015 -0.7 -1.0 hypothetical protein compare
BWI76_RS20380 -0.7 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS01890 -0.7 -2.9 transcriptional regulator Zur compare
BWI76_RS11515 -0.7 -1.3 peptide-methionine (R)-S-oxide reductase compare
BWI76_RS20715 -0.7 -1.6 RpoE-regulated lipoprotein compare
BWI76_RS11980 -0.7 -1.3 DeoR family transcriptional regulator compare
BWI76_RS24040 -0.7 -1.4 hypothetical protein compare
BWI76_RS20440 -0.7 -1.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS11835 -0.7 -1.6 putative regulatory protein MarR compare
BWI76_RS01350 -0.7 -0.8 NAD(P)H-flavin reductase compare
BWI76_RS04715 -0.7 -1.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS23305 -0.7 -1.9 NADP(H)-dependent aldo-keto reductase compare
BWI76_RS06535 -0.7 -2.9 endopeptidase La compare
BWI76_RS00970 -0.7 -2.7 branched chain amino acid aminotransferase compare
BWI76_RS16335 -0.7 -1.3 division septum protein Blr compare
BWI76_RS07255 -0.7 -1.3 hypothetical protein compare
BWI76_RS19805 -0.7 -1.2 Bcr/CflA family multidrug efflux MFS transporter compare
BWI76_RS10725 -0.7 -1.8 hypothetical protein compare
BWI76_RS05440 -0.7 -4.2 hydroxyacylglutathione hydrolase compare
BWI76_RS00265 -0.7 -4.1 potassium transporter Kup compare
BWI76_RS14770 -0.7 -1.2 PTS IIA 2 domain protein compare
BWI76_RS22695 -0.7 -2.5 sulfate adenylyltransferase compare
BWI76_RS24880 -0.7 -1.7 PTS galactitol transporter subunit IIA compare
BWI76_RS26620 -0.7 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS25425 -0.7 -1.1 arginine repressor compare
BWI76_RS16425 -0.7 -1.3 hypothetical protein compare
BWI76_RS24600 -0.7 -3.2 dihydroxyacetone kinase compare
BWI76_RS00240 -0.7 -1.1 FMN-binding protein MioC compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source D-Glucose across organisms