Experiment set12IT003 for Klebsiella michiganensis M5al

Compare to:

D-Glucose 120 mM carbon source

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS20360 +1.0 1.9 cell division protein DedD compare
BWI76_RS09195 +0.9 1.3 N-acetyltransferase compare
BWI76_RS15830 +0.7 2.0 hypothetical protein compare
BWI76_RS16025 +0.7 1.8 triphosphoribosyl-dephospho-CoA synthase compare
BWI76_RS20750 +0.7 1.5 carboxysome structural protein EutK compare
BWI76_RS21340 +0.7 1.8 SoxR reducing system protein RseC compare
BWI76_RS17300 +0.7 1.8 tRNA-Tyr compare
BWI76_RS02860 +0.7 1.6 glycine dehydrogenase compare
BWI76_RS15825 +0.7 1.5 hypothetical protein compare
BWI76_RS02180 +0.7 1.4 hypothetical protein compare
BWI76_RS14305 +0.6 2.9 metallophosphoesterase compare
BWI76_RS19145 +0.6 2.0 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS20730 +0.6 1.8 hypothetical protein compare
BWI76_RS10910 +0.6 3.1 hypothetical protein compare
BWI76_RS12780 +0.6 1.7 hypothetical protein compare
BWI76_RS04895 +0.6 1.6 hypothetical protein compare
BWI76_RS11395 +0.6 3.0 RNA polymerase sigma factor FecI compare
BWI76_RS02440 +0.6 2.1 fumarate reductase subunit D compare
BWI76_RS16455 +0.6 2.1 superoxide dismutase compare
BWI76_RS08640 +0.6 1.9 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS25920 +0.6 1.7 peptidylprolyl isomerase compare
BWI76_RS21565 +0.6 1.1 outer membrane protein assembly factor BamE compare
BWI76_RS24335 +0.6 2.1 two-component system response regulator QseB compare
BWI76_RS17075 +0.6 1.9 3-deoxy-7-phosphoheptulonate synthase compare
BWI76_RS15190 +0.6 2.5 GGDEF domain-containing protein compare
BWI76_RS15760 +0.6 1.5 hypothetical protein compare
BWI76_RS02725 +0.6 1.1 HxlR family transcriptional regulator compare
BWI76_RS11200 +0.6 1.7 transpeptidase compare
BWI76_RS12170 +0.6 2.1 hypothetical protein compare
BWI76_RS02745 +0.6 1.3 hypothetical protein compare
BWI76_RS21505 +0.5 1.1 hypothetical protein compare
BWI76_RS13160 +0.5 1.7 azoreductase compare
BWI76_RS25035 +0.5 2.1 malonate transporter subunit MadM compare
BWI76_RS16200 +0.5 1.2 NAD(P) transhydrogenase subunit beta compare
BWI76_RS18600 +0.5 2.7 HupC/HyaC/HydC family protein compare
BWI76_RS07955 +0.5 1.4 nucleoside diphosphate kinase regulator compare
BWI76_RS16210 +0.5 1.6 hypothetical protein compare
BWI76_RS16815 +0.5 1.7 periplasmic binding protein compare
BWI76_RS23530 +0.5 1.5 MarR family transcriptional regulator compare
BWI76_RS06400 +0.5 1.2 oxidative-stress-resistance chaperone compare
BWI76_RS07385 +0.5 1.4 short-chain dehydrogenase/reductase SDR compare
BWI76_RS23215 +0.5 2.0 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS13515 +0.5 2.0 amino acid permease compare
BWI76_RS17920 +0.5 2.0 23S rRNA (guanine(745)-N(1))-methyltransferase compare
BWI76_RS14650 +0.5 1.6 helix-turn-helix transcriptional regulator compare
BWI76_RS18565 +0.5 1.6 pemk protein compare
BWI76_RS06870 +0.5 1.7 aminoacyl-tRNA deacylase compare
BWI76_RS13785 +0.5 1.8 ABC transporter permease compare
BWI76_RS16425 +0.5 1.2 hypothetical protein compare
BWI76_RS13095 +0.5 0.9 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS12040 +0.5 1.2 hypothetical protein compare
BWI76_RS06735 +0.5 1.6 50S ribosomal protein L31 compare
BWI76_RS21075 +0.5 1.1 membrane protein compare
BWI76_RS05880 +0.5 1.6 AraC-type DNA-binding domain-containing protein compare
BWI76_RS08585 +0.5 1.5 nicotinamide riboside transporter PnuC compare
BWI76_RS18080 +0.5 1.8 protein YebE compare
BWI76_RS07185 +0.5 0.6 hypothetical protein compare
BWI76_RS27875 +0.5 1.1 membrane protein compare
BWI76_RS11525 +0.5 1.8 HNH endonuclease compare
BWI76_RS19585 +0.5 1.7 gentisate 1,2-dioxygenase compare
BWI76_RS16230 +0.5 1.1 dihydromonapterin reductase compare
BWI76_RS12950 +0.5 1.4 acriflavin resistance protein AcrA compare
BWI76_RS13420 +0.5 1.0 ABC transporter permease compare
BWI76_RS05955 +0.5 2.2 ABC transporter compare
BWI76_RS00480 +0.5 1.5 hypothetical protein compare
BWI76_RS23705 +0.5 1.4 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS13930 +0.5 2.2 putative LysR-family transcriptional regulator compare
BWI76_RS18745 +0.5 1.5 adenosylhomocysteinase compare
BWI76_RS26405 +0.5 1.0 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS09250 +0.5 1.4 hypothetical protein compare
BWI76_RS20785 +0.5 1.0 ethanolamine utilization protein EutJ compare
BWI76_RS20465 +0.5 2.1 hypothetical protein compare
BWI76_RS10755 +0.5 1.1 pyrimidine utilization flavin reductase protein F compare
BWI76_RS20245 +0.5 1.9 transketolase subunit B compare
BWI76_RS07475 +0.4 0.8 DNA-binding transcriptional regulator RamA compare
BWI76_RS18885 +0.4 1.7 nitrogen fixation regulatory protein compare
BWI76_RS11520 +0.4 0.9 hypothetical protein compare
BWI76_RS07725 +0.4 0.9 iron-enterobactin transporter permease compare
BWI76_RS05070 +0.4 1.6 type II secretion system protein GspH compare
BWI76_RS18905 +0.4 1.9 putrescine/spermidine ABC transporter compare
BWI76_RS10805 +0.4 2.2 hypothetical protein compare
BWI76_RS12825 +0.4 1.6 hypothetical protein compare
BWI76_RS19855 +0.4 2.5 AI-2E family transporter compare
BWI76_RS07310 +0.4 1.6 sucrose-6-phosphate hydrolase compare
BWI76_RS01585 +0.4 1.3 transcriptional regulator compare
BWI76_RS03105 +0.4 0.8 myo-inosose-2 dehydratase compare
BWI76_RS16030 +0.4 1.7 malonate decarboxylase acyl carrier protein compare
BWI76_RS26260 +0.4 2.0 hypothetical protein compare
BWI76_RS15620 +0.4 1.2 hypothetical protein compare
BWI76_RS18580 +0.4 1.2 hypothetical protein compare
BWI76_RS27820 +0.4 1.2 ilvB operon leader peptide IvbL compare
BWI76_RS21685 +0.4 1.0 hypothetical protein compare
BWI76_RS16675 +0.4 1.2 ABC transporter compare
BWI76_RS07260 +0.4 2.3 branched chain amino acid ABC transporter substrate-binding protein compare
BWI76_RS23150 +0.4 1.7 propanediol utilization phosphotransacylase compare
BWI76_RS06235 +0.4 1.8 PAS domain-containing sensor histidine kinase compare
BWI76_RS09520 +0.4 1.2 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS15955 +0.4 2.0 transcriptional regulator compare
BWI76_RS22850 +0.4 1.4 tRNA pseudouridine synthase TruC compare
BWI76_RS13755 +0.4 1.2 hypothetical protein compare
BWI76_RS04600 +0.4 2.4 inner membrane protein compare
BWI76_RS19905 +0.4 2.3 OmpK36 porin compare
BWI76_RS10385 +0.4 1.5 MmgE/PrpD family protein compare
BWI76_RS04710 +0.4 2.4 hypothetical protein compare
BWI76_RS01000 +0.4 1.8 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS08360 +0.4 2.1 LamB/YcsF family protein compare
BWI76_RS15660 +0.4 0.6 hypothetical protein compare
BWI76_RS24270 +0.4 1.4 membrane protein compare
BWI76_RS23040 +0.4 3.0 sirohydrochlorin cobaltochelatase compare
BWI76_RS16680 +0.4 1.5 ABC transporter substrate-binding protein compare
BWI76_RS23340 +0.4 1.3 transcriptional regulator compare
BWI76_RS22840 +0.4 1.1 transposase compare
BWI76_RS24520 +0.4 2.6 urease accessory protein UreF compare
BWI76_RS16920 +0.4 0.7 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS17970 +0.4 1.4 zinc metalloprotease HtpX compare
BWI76_RS12585 +0.4 0.9 transcriptional regulator compare
BWI76_RS14065 +0.4 0.7 hypothetical protein compare
BWI76_RS13630 +0.4 1.7 ABC transporter compare
BWI76_RS13250 +0.4 0.8 cytochrome b561 compare
BWI76_RS22095 +0.4 1.6 multidrug export protein EmrA compare
BWI76_RS15290 +0.4 0.9 transcriptional regulator compare
BWI76_RS03805 +0.4 2.2 porin compare
BWI76_RS22815 +0.4 2.8 hybrid sensor histidine kinase/response regulator compare
BWI76_RS21690 +0.4 0.9 hypothetical protein compare
BWI76_RS13360 +0.4 1.8 benzoate transporter compare
BWI76_RS19100 +0.4 2.0 putative acid phosphatase compare
BWI76_RS16645 +0.4 0.9 DeoR family transcriptional regulator compare
BWI76_RS17085 +0.4 2.2 hypothetical protein compare
BWI76_RS15745 +0.4 1.3 hypothetical protein compare
BWI76_RS25420 +0.4 1.8 malate dehydrogenase compare
BWI76_RS16175 +0.4 1.6 p-aminobenzoyl-glutamate transporter compare
BWI76_RS15845 +0.4 0.6 hypothetical protein compare
BWI76_RS14775 +0.4 0.8 creatinine amidohydrolase compare
BWI76_RS04010 +0.4 1.7 hypothetical protein compare
BWI76_RS15800 +0.4 1.8 transcriptional regulator compare
BWI76_RS10680 +0.4 1.9 tartrate dehydrogenase compare
BWI76_RS09690 +0.4 1.4 dimethyl sulfoxide reductase compare
BWI76_RS08350 +0.4 2.2 carboxylase compare
BWI76_RS13460 +0.4 2.6 ABC transporter substrate-binding protein compare
BWI76_RS18335 +0.4 2.2 DNA-binding response regulator compare
BWI76_RS25290 +0.4 1.3 monofunctional biosynthetic peptidoglycan transglycosylase compare
BWI76_RS05480 +0.4 2.3 class II glutamine amidotransferase compare
BWI76_RS16790 +0.4 1.7 MFS transporter compare
BWI76_RS23125 +0.4 1.1 propanediol dehydratase small subunit compare
BWI76_RS17390 +0.4 1.3 DsrE family protein compare
BWI76_RS08970 +0.4 1.3 glutamine ABC transporter permease GlnP compare
BWI76_RS05970 +0.4 1.3 hypothetical protein compare
BWI76_RS20280 +0.4 1.5 phosphodiesterase compare
BWI76_RS00795 +0.4 1.4 carboxymuconolactone decarboxylase compare
BWI76_RS13660 +0.4 0.9 nitrate reductase subunit beta compare
BWI76_RS08450 +0.4 1.5 fumarate hydratase compare
BWI76_RS07705 +0.4 1.1 enterochelin esterase compare
BWI76_RS11440 +0.4 0.8 hypothetical protein compare
BWI76_RS12195 +0.4 1.3 hypothetical protein compare
BWI76_RS08590 +0.4 1.4 zinc transporter ZitB compare
BWI76_RS26235 +0.4 1.0 gluconate transporter compare
BWI76_RS01905 +0.4 1.4 envelope stress response protein PspG compare
BWI76_RS17570 +0.4 1.5 iron-sulfur-binding protein compare
BWI76_RS06065 +0.4 1.7 taurine ABC transporter substrate-binding protein compare
BWI76_RS11155 +0.4 1.3 penicillin-binding protein activator LpoB compare
BWI76_RS18410 +0.4 1.7 drug/metabolite exporter YedA compare
BWI76_RS04515 +0.4 0.9 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS20075 +0.4 1.4 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase compare
BWI76_RS03295 +0.4 1.0 transposase compare
BWI76_RS01035 +0.4 1.6 ADP-ribosylation/crystallin J1 compare
BWI76_RS03605 +0.4 2.0 BMC domain-containing protein compare
BWI76_RS08335 +0.4 1.5 deoxyribodipyrimidine photo-lyase compare
BWI76_RS26030 +0.4 1.6 cytosine deaminase compare
BWI76_RS19240 +0.4 0.9 ABC transporter substrate-binding protein compare
BWI76_RS24500 +0.3 1.0 urease subunit gamma compare
BWI76_RS01550 +0.3 1.4 thiamine phosphate synthase compare
BWI76_RS23200 +0.3 1.5 propionate kinase compare
BWI76_RS02420 +0.3 2.1 entericidin EcnAB compare
BWI76_RS22630 +0.3 1.2 LysR family transcriptional regulator compare
BWI76_RS03645 +0.3 2.5 hypothetical protein compare
BWI76_RS17740 +0.3 2.3 SpoVR family protein compare
BWI76_RS17795 +0.3 2.1 ribonuclease D compare
BWI76_RS02090 +0.3 1.1 membrane protein compare
BWI76_RS15095 +0.3 1.7 isochorismatase compare
BWI76_RS16120 +0.3 0.7 4-carboxymuconolactone decarboxylase compare
BWI76_RS16510 +0.3 1.7 transcriptional repressor PurR compare
BWI76_RS11365 +0.3 0.9 iron ABC transporter compare
BWI76_RS05680 +0.3 1.8 LacI family transcriptional regulator compare
BWI76_RS07950 +0.3 2.0 universal stress protein G compare
BWI76_RS21450 +0.3 0.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS26930 +0.3 1.7 biotin sulfoxide reductase compare
BWI76_RS02365 +0.3 1.7 hypothetical protein compare
BWI76_RS05800 +0.3 1.1 phage transcriptional activator, Ogr/delta compare
BWI76_RS06560 +0.3 0.9 7-cyano-7-deazaguanine synthase QueC compare
BWI76_RS21870 +0.3 1.6 hypothetical protein compare
BWI76_RS16585 +0.3 1.8 trehalose synthase compare
BWI76_RS11435 +0.3 0.7 hypothetical protein compare
BWI76_RS16990 +0.3 1.8 ABC transporter ATP-binding protein compare
BWI76_RS07790 +0.3 1.1 plasmid stabilization protein compare
BWI76_RS17070 +0.3 1.4 phosphoenolpyruvate synthase regulatory protein compare
BWI76_RS03965 +0.3 2.2 PTS sugar transporter compare
BWI76_RS23165 +0.3 1.1 ATP:cob(I)alamin adenosyltransferase compare
BWI76_RS24080 +0.3 0.7 DUF179 domain-containing protein compare
BWI76_RS05410 +0.3 2.2 2,5-didehydrogluconate reductase B compare
BWI76_RS11170 +0.3 0.7 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in carbon source experiments

For carbon source D-Glucose across organisms