Experiment set12H6 for Pseudomonas stutzeri RCH2

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L-Glutamic acid monopotassium salt monohydrate carbon source

200 most important genes:

  gene name fitness t score description  
Psest_3944 -7.5 -5.1 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) compare
Psest_2088 -7.4 -4.5 Uncharacterized protein conserved in bacteria compare
Psest_3647 -7.2 -4.9 Indole-3-glycerol phosphate synthase compare
Psest_0279 -6.9 -4.8 methionine biosynthesis protein MetW compare
Psest_0153 -6.8 -6.6 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit compare
Psest_3648 -6.4 -6.3 anthranilate phosphoribosyltransferase compare
Psest_3650 -6.4 -13.1 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_0508 -6.4 -8.8 gamma-glutamyl phosphate reductase compare
Psest_0062 -6.4 -10.7 tryptophan synthase, alpha subunit compare
Psest_3864 -6.4 -12.9 Histidinol-phosphatase (EC:3.1.3.15) (from data) compare
Psest_3721 -6.3 -7.5 Malic enzyme compare
Psest_2591 -6.3 -4.3 3-isopropylmalate dehydratase, large subunit compare
Psest_2578 -6.2 -12.6 O-succinylhomoserine sulfhydrylase compare
Psest_2584 -6.2 -6.0 Phosphoribosylanthranilate isomerase compare
Psest_0155 -6.2 -6.0 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) compare
Psest_1473 -6.1 -4.2 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_3866 -6.0 -17.0 threonine ammonia-lyase, biosynthetic, long form compare
Psest_0152 -5.9 -7.0 Imidazoleglycerol-phosphate dehydratase compare
Psest_3384 -5.8 -9.7 glutamate 5-kinase compare
Psest_2590 -5.8 -2.1 3-isopropylmalate dehydratase, small subunit compare
Psest_3298 -5.8 -11.7 histidinol dehydrogenase compare
Psest_0280 -5.6 -17.0 homoserine O-acetyltransferase compare
Psest_3299 -5.5 -14.2 ATP phosphoribosyltransferase (EC 2.4.2.17) (from data) compare
Psest_1772 -5.2 -3.6 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_3649 -5.1 -11.0 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_0325 -5.1 -13.5 Putative threonine efflux protein compare
Psest_4077 -5.0 -17.8 amino acid carrier protein compare
Psest_0063 -5.0 -13.4 tryptophan synthase, beta subunit compare
Psest_0687 -5.0 -9.6 ATP phosphoribosyltransferase, regulatory subunit compare
Psest_2589 -4.8 -12.9 3-isopropylmalate dehydrogenase compare
Psest_0313 -4.8 -7.4 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_1037 -4.5 -3.8 acetolactate synthase, small subunit compare
Psest_3998 -4.5 -7.5 glutamate--cysteine ligase compare
Psest_3818 -4.4 -11.0 endoribonuclease L-PSP, putative compare
Psest_3943 -4.4 -6.2 Phosphoribosyl-AMP cyclohydrolase compare
Psest_2862 -4.3 -15.2 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_2329 -4.1 -18.1 Transcriptional regulator compare
Psest_1012 -3.9 -4.7 Signal transduction histidine kinase compare
Psest_1295 -3.8 -6.9 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_0326 -3.8 -11.0 Taurine catabolism dioxygenase TauD, TfdA family. compare
Psest_2579 -3.6 -2.5 amidophosphoribosyltransferase compare
Psest_1686 -3.2 -5.1 fatty acid/phospholipid synthesis protein PlsX compare
Psest_3297 -3.1 -13.7 histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data) compare
Psest_2712 -3.1 -6.6 Surface lipoprotein compare
Psest_3226 -3.1 -1.9 Predicted membrane protein compare
Psest_2651 -3.0 -6.0 DNA topoisomerase I, bacterial compare
Psest_0445 -3.0 -13.9 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_0999 -2.9 -2.0 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_2333 -2.9 -1.8 Protein of unknown function (DUF3359). compare
Psest_0327 -2.8 -5.4 Transcriptional regulator compare
Psest_3304 -2.8 -6.8 ABC-type transport system involved in resistance to organic solvents, auxiliary component compare
Psest_3303 -2.7 -7.1 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_3305 -2.7 -10.1 ABC-type transport system involved in resistance to organic solvents, periplasmic component compare
Psest_3307 -2.6 -9.3 ABC-type transport system involved in resistance to organic solvents, ATPase component compare
Psest_0359 -2.5 -4.0 Transcriptional regulators compare
Psest_1013 -2.5 -1.7 phosphoribosylamine--glycine ligase compare
Psest_4075 -2.5 -11.6 symporter for L-glutamate, L-glutamine, and L-proline (from data) conserved
Psest_3691 -2.4 -4.6 Predicted membrane protein compare
Psest_4298 -2.4 -1.7 Response regulator containing a CheY-like receiver domain and a GGDEF domain compare
Psest_1765 -2.4 -9.3 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_1724 -2.4 -5.2 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_4191 -2.4 -4.5 Transcriptional regulator compare
Psest_3306 -2.3 -6.2 conserved hypothetical integral membrane protein compare
Psest_3301 -2.3 -5.4 Predicted transcriptional regulator, BolA superfamily compare
Psest_1277 -2.3 -13.1 2-isopropylmalate synthase, yeast type compare
Psest_2090 -2.3 -5.3 Protein of unknown function (DUF2970). compare
Psest_1704 -2.2 -1.5 Dehydrogenases (flavoproteins) compare
Psest_0466 -2.2 -5.1 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_1474 -2.2 -1.5 phosphoribosylaminoimidazole synthetase compare
Psest_1163 -2.2 -5.7 diguanylate cyclase (GGDEF) domain compare
Psest_0170 -2.1 -7.0 5,10-methenyltetrahydrofolate synthetase compare
Psest_4085 -2.1 -13.3 Biotin carboxylase compare
Psest_3322 -2.1 -16.1 TIGR02099 family protein compare
Psest_0411 -2.0 -11.0 biotin synthetase compare
Psest_2324 -2.0 -15.5 hypothetical protein compare
Psest_3338 -2.0 -2.9 Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain compare
Psest_2863 -1.9 -8.4 Transcriptional regulator compare
Psest_0248 -1.9 -9.7 Transcriptional regulator compare
Psest_2325 -1.9 -11.5 alpha-L-glutamate ligase-related protein compare
Psest_4084 -1.9 -12.0 oxaloacetate decarboxylase alpha subunit compare
Psest_3720 -1.9 -13.9 penicillin-binding protein, 1A family compare
Psest_3810 -1.8 -1.2 orotate phosphoribosyltransferase compare
Psest_2323 -1.8 -11.4 Uncharacterized protein conserved in archaea compare
Psest_1813 -1.8 -10.6 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_0722 -1.8 -7.7 Predicted ATPase compare
Psest_0718 -1.8 -3.4 nicotinate-nucleotide pyrophosphorylase compare
Psest_0851 -1.7 -10.6 Transcriptional regulators compare
Psest_2327 -1.7 -7.3 phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein compare
Psest_3159 -1.7 -5.9 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_3129 -1.7 -2.3 tyrosine recombinase XerD compare
Psest_0417 -1.7 -3.1 Acyl-CoA dehydrogenases compare
Psest_4086 -1.7 -9.2 Transcriptional regulator compare
Psest_0489 -1.6 -1.6 phosphoserine phosphatase SerB compare
Psest_1661 -1.6 -2.2 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_1695 -1.6 -4.4 Tfp pilus assembly protein PilZ compare
Psest_0442 -1.6 -2.1 ATPases of the AAA+ class compare
Psest_0412 -1.6 -8.0 8-amino-7-oxononanoate synthase compare
Psest_1656 -1.5 -2.4 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_1660 -1.5 -2.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_3288 -1.5 -10.0 type IV-A pilus assembly ATPase PilB compare
Psest_3960 -1.5 -1.9 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_0297 -1.5 -4.3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1486 -1.5 -3.7 hypothetical protein compare
Psest_0309 -1.5 -2.0 RND family efflux transporter, MFP subunit compare
Psest_3988 -1.5 -7.0 phosphoenolpyruvate carboxykinase (ATP) compare
Psest_4082 -1.4 -2.7 hypothetical protein compare
Psest_2532 -1.4 -3.1 Uncharacterized protein conserved in bacteria compare
Psest_2946 -1.4 -3.2 septum site-determining protein MinD compare
Psest_0193 -1.4 -1.1 conserved hypothetical protein compare
Psest_0306 -1.3 -9.5 adenosylmethionine-8-amino-7-oxononanoate transaminase compare
Psest_2037 -1.3 -5.8 uroporphyrin-III C-methyltransferase compare
Psest_4097 -1.3 -8.8 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_1000 -1.3 -7.8 PAS domain S-box compare
Psest_0415 -1.3 -3.4 dethiobiotin synthase compare
Psest_0257 -1.3 -1.9 Predicted Zn-dependent peptidases compare
Psest_3573 -1.2 -3.3 dTDP-4-dehydrorhamnose reductase compare
Psest_2316 -1.2 -8.6 phosphoenolpyruvate synthase compare
Psest_2748 -1.2 -2.5 Transcriptional regulator compare
Psest_0031 -1.2 -2.2 Uncharacterized conserved protein compare
Psest_4044 -1.2 -2.6 type I site-specific deoxyribonuclease, HsdR family compare
Psest_0491 -1.2 -7.4 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_0413 -1.2 -3.9 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_1947 -1.2 -0.8 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_0198 -1.1 -7.1 TRAP transporter solute receptor, TAXI family compare
Psest_4252 -1.1 -3.8 Uncharacterized protein conserved in bacteria compare
Psest_0277 -1.1 -1.3 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Psest_3645 -1.1 -7.3 Predicted redox protein, regulator of disulfide bond formation compare
Psest_3809 -1.1 -4.0 hypothetical protein compare
Psest_3806 -1.1 -4.8 Phosphomannomutase compare
Psest_0182 -1.1 -5.0 glycine cleavage system H protein compare
Psest_2810 -1.1 -4.8 5'/3'-nucleotidase SurE compare
Psest_2001 -1.1 -1.6 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_0771 -1.1 -7.0 Acyl-CoA hydrolase compare
Psest_2809 -1.1 -3.1 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
Psest_2317 -1.1 -6.4 Uncharacterized protein conserved in bacteria compare
Psest_2719 -1.1 -1.5 acetylornithine and succinylornithine aminotransferases/succinylornithine transaminase family compare
Psest_1814 -1.0 -8.3 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_3042 -1.0 -1.6 Nitrate reductase cytochrome c-type subunit compare
Psest_3323 -1.0 -4.1 ribonuclease, Rne/Rng family compare
Psest_0197 -1.0 -7.1 TRAP transporter, 4TM/12TM fusion protein compare
Psest_3145 -1.0 -1.7 hypothetical protein compare
Psest_3178 -1.0 -2.9 formyltetrahydrofolate deformylase compare
Psest_1516 -1.0 -1.8 Uncharacterized lipoprotein compare
Psest_3180 -1.0 -5.9 Exonuclease I compare
Psest_0998 -1.0 -2.8 poly(A) polymerase compare
Psest_2585 -1.0 -1.1 pseudouridylate synthase I compare
Psest_1058 -1.0 -1.9 ribosomal-protein-alanine acetyltransferase compare
Psest_0285 -1.0 -5.9 pilus retraction protein PilT compare
Psest_1144 -1.0 -1.3 AmpG-related permease compare
Psest_1510 -1.0 -2.6 Putative Zn-dependent protease, contains TPR repeats compare
Psest_4297 -1.0 -7.1 PAS domain S-box compare
Psest_1054 -1.0 -5.2 Diaminopimelate decarboxylase compare
Psest_2605 -1.0 -1.5 transcriptional activator RfaH compare
Psest_3910 -0.9 -2.0 Uncharacterized protein conserved in bacteria compare
Psest_4005 -0.9 -4.8 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
Psest_2379 -0.9 -6.2 PAS domain S-box compare
Psest_1001 -0.9 -2.4 hypothetical protein compare
Psest_3185 -0.9 -1.8 MoxR-like ATPases compare
Psest_4247 -0.9 -2.5 Serine/threonine protein phosphatase compare
Psest_1944 -0.9 -7.3 NAD-specific glutamate dehydrogenase (EC 1.4.1.2), large form (from data) compare
Psest_0485 -0.9 -2.4 clan AA aspartic protease, TIGR02281 family compare
Psest_3228 -0.9 -6.1 Zn-dependent protease with chaperone function compare
Psest_2643 -0.9 -1.7 Beta-glucosidase-related glycosidases compare
Psest_3419 -0.9 -4.4 Predicted transcriptional regulators compare
Psest_1763 -0.9 -2.8 hypothetical protein compare
Psest_0281 -0.9 -5.2 Dynamin family. compare
Psest_1974 -0.9 -2.6 integration host factor, alpha subunit compare
Psest_3550 -0.9 -1.7 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_2102 -0.9 -7.4 5-methyltetrahydrofolate--homocysteine methyltransferase compare
Psest_4003 -0.8 -2.6 TIGR00153 family protein compare
Psest_1489 -0.8 -2.5 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases compare
Psest_0119 -0.8 -1.6 hypothetical protein compare
Psest_0292 -0.8 -1.4 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase compare
Psest_0414 -0.8 -3.1 biotin biosynthesis protein BioC compare
Psest_2864 -0.8 -2.1 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0136 -0.8 -5.8 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Psest_3287 -0.8 -3.3 Type II secretory pathway, component PulF compare
Psest_0449 -0.8 -5.4 Glutamine synthetase adenylyltransferase compare
Psest_1056 -0.8 -1.9 2-isopropylmalate synthase, bacterial type compare
Psest_0334 -0.8 -1.8 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_0533 -0.8 -3.6 Sel1 repeat. compare
Psest_0709 -0.8 -5.0 pseudouridine synthase, RluA family compare
Psest_0137 -0.8 -4.2 amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family compare
Psest_1659 -0.8 -1.8 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_0207 -0.8 -2.5 hypothetical protein compare
Psest_1602 -0.8 -2.3 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1774 -0.8 -1.8 Glutathione peroxidase compare
Psest_1945 -0.8 -2.9 hypothetical protein compare
Psest_0831 -0.8 -1.0 hypothetical protein compare
Psest_0691 -0.7 -5.5 ribonuclease R compare
Psest_1463 -0.7 -0.8 SufE protein probably involved in Fe-S center assembly compare
Psest_0537 -0.7 -1.2 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase compare
Psest_0393 -0.7 -3.4 Methylase of chemotaxis methyl-accepting proteins compare
Psest_0520 -0.7 -0.8 hypothetical protein compare
Psest_0028 -0.7 -2.5 Coproporphyrinogen III oxidase compare
Psest_3777 -0.7 -2.2 diguanylate cyclase (GGDEF) domain compare
Psest_4406 -0.7 -1.2 hypothetical protein compare
Psest_1179 -0.7 -1.6 2-hydroxy-3-oxopropionate reductase compare
Psest_0284 -0.7 -4.6 pyridoxal phosphate enzyme, YggS family compare
Psest_2852 -0.7 -3.5 Outer membrane lipoprotein compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas stutzeri RCH2

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms