Experiment set12H6 for Pseudomonas stutzeri RCH2

Compare to:

L-Glutamic acid monopotassium salt monohydrate carbon source

200 most detrimental genes:

  gene name fitness t score description  
Psest_4078 +3.8 14.5 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_2260 +2.9 26.6 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_1635 +2.8 26.0 Signal transduction histidine kinase compare
Psest_1840 +1.9 18.1 Undecaprenyl-phosphate glucose phosphotransferase compare
Psest_1122 +1.8 16.0 putative adhesin (DUF1302) (from data) compare
Psest_1924 +1.8 15.4 adhesin-associated MmpL efflux pump (from data) compare
Psest_0558 +1.7 2.9 urease, beta subunit compare
Psest_3938 +1.5 6.5 Uncharacterized protein conserved in bacteria compare
Psest_0538 +1.5 15.0 Signal transduction histidine kinase compare
Psest_1923 +1.5 8.0 adhesin-associated BNR repeat protein (from data) compare
Psest_4113 +1.3 6.5 hypothetical protein compare
Psest_3100 +1.3 6.7 RNA polymerase sigma factor RpoE compare
Psest_1567 +1.2 9.0 Transcriptional regulator compare
Psest_3373 +1.2 7.1 Tfp pilus assembly protein PilX compare
Psest_1733 +1.2 3.8 flagellar biosynthetic protein FliQ compare
Psest_1625 +1.2 4.6 hypothetical protein compare
Psest_0243 +1.2 2.5 hypothetical protein compare
Psest_3117 +1.2 5.2 electron transport complex, RnfABCDGE type, E subunit compare
Psest_3399 +1.1 1.2 Uncharacterized protein conserved in bacteria compare
Psest_4273 +1.1 7.3 Lysophospholipase compare
Psest_1737 +1.1 6.7 flagellar biosynthesis protein FlhA compare
Psest_0298 +1.1 5.8 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_3192 +1.1 7.2 diguanylate cyclase (GGDEF) domain compare
Psest_1731 +1.1 3.6 flagellar biosynthetic protein FliO compare
Psest_1722 +1.1 7.9 flagellar protein export ATPase FliI compare
Psest_1720 +1.1 7.3 flagellar motor switch protein FliG compare
Psest_0708 +1.0 2.3 outer membrane assembly lipoprotein YfiO compare
Psest_3371 +1.0 7.2 type IV pilus modification protein PilV compare
Psest_1740 +1.0 5.9 RNA polymerase sigma factor, FliA/WhiG family compare
Psest_1719 +1.0 6.1 flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) compare
Psest_0737 +1.0 1.7 Cu(I)-responsive transcriptional regulator compare
Psest_0496 +1.0 6.6 flagellar motor stator protein MotA compare
Psest_2072 +1.0 5.2 Methyltransferase domain. compare
Psest_1718 +1.0 5.8 flagellar hook-basal body complex protein FliE compare
Psest_3372 +1.0 7.6 Tfp pilus assembly protein PilW compare
Psest_0740 +1.0 1.8 Transcriptional regulator compare
Psest_1734 +1.0 3.8 flagellar biosynthetic protein FliR compare
Psest_2018 +1.0 2.6 Uncharacterized conserved protein compare
Psest_1725 +0.9 7.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_2383 +0.9 8.2 Predicted transcriptional regulators compare
Psest_0959 +0.9 3.2 Uncharacterized protein conserved in bacteria compare
Psest_2066 +0.9 1.3 ABC-type uncharacterized transport system, permease component compare
Psest_0312 +0.9 5.3 Superfamily II DNA and RNA helicases compare
Psest_3270 +0.9 1.7 probable S-adenosylmethionine-dependent methyltransferase, YraL family compare
Psest_3115 +0.9 4.7 electron transport complex, RnfABCDGE type, D subunit compare
Psest_0497 +0.9 5.1 Flagellar motor protein compare
Psest_1729 +0.9 4.7 flagellar motor switch protein FliM compare
Psest_1123 +0.8 7.0 adhesin-associated sorting protein (DUF1329) (from data) compare
Psest_1752 +0.8 1.6 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB compare
Psest_1721 +0.8 4.1 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_0487 +0.8 4.2 Uncharacterized protein conserved in bacteria compare
Psest_4076 +0.8 1.8 hypothetical protein compare
Psest_3374 +0.8 6.2 Tfp pilus assembly protein, tip-associated adhesin PilY1 compare
Psest_3456 +0.8 1.7 RNA polymerase sigma factor, sigma-70 family compare
Psest_0316 +0.8 2.8 Cytochrome c556 compare
Psest_3044 +0.8 4.1 deoxycytidine triphosphate deaminase compare
Psest_0988 +0.8 1.1 Protein of unknown function (DUF2845). compare
Psest_3370 +0.8 4.1 prepilin-type N-terminal cleavage/methylation domain compare
Psest_4177 +0.8 1.9 flagellar biosynthetic protein FliP compare
Psest_2973 +0.8 3.5 Flagellar biosynthesis/type III secretory pathway chaperone compare
Psest_2965 +0.7 6.7 fagellar hook-basal body proteins compare
Psest_2136 +0.7 5.8 Predicted homoserine dehydrogenase compare
Psest_1388 +0.7 1.2 Uncharacterized protein conserved in bacteria compare
Psest_2122 +0.7 1.2 Parvulin-like peptidyl-prolyl isomerase compare
Psest_0301 +0.7 2.8 Methylase of chemotaxis methyl-accepting proteins compare
Psest_3697 +0.7 1.9 Outer membrane lipoprotein carrier protein LolA. compare
Psest_1745 +0.7 3.1 Flagellar motor component compare
Psest_3745 +0.7 2.4 Uncharacterized enzyme of heme biosynthesis compare
Psest_4241 +0.7 4.2 hypothetical protein compare
Psest_2104 +0.7 1.8 IscR-regulated protein YhgI compare
Psest_1366 +0.7 1.6 hypothetical protein compare
Psest_1728 +0.7 3.2 Flagellar basal body-associated protein compare
Psest_2586 +0.7 6.5 FimV N-terminal domain compare
Psest_2845 +0.7 5.3 [Protein-PII] uridylyltransferase compare
Psest_2561 +0.7 1.1 hypothetical protein compare
Psest_3832 +0.7 2.0 hypothetical protein compare
Psest_1999 +0.7 1.3 pseudouridine synthase compare
Psest_3646 +0.7 3.4 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Psest_0302 +0.7 5.4 Chemotaxis protein histidine kinase and related kinases compare
Psest_0164 +0.7 0.9 Glutaredoxin, GrxC family compare
Psest_3114 +0.6 3.7 electron transport complex, RnfABCDGE type, C subunit compare
Psest_2958 +0.6 5.3 flagellar hook-associated protein 3 compare
Psest_2757 +0.6 1.2 hypothetical protein compare
Psest_1732 +0.6 2.6 flagellar biosynthetic protein FliP compare
Psest_3693 +0.6 2.2 Glycosyltransferases involved in cell wall biogenesis compare
Psest_1491 +0.6 1.2 Cold shock proteins compare
Psest_3890 +0.6 1.5 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_2538 +0.6 1.8 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Psest_2304 +0.6 1.1 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_1878 +0.6 1.7 Uncharacterized protein conserved in bacteria compare
Psest_0993 +0.6 4.5 Glucose-6-phosphate isomerase compare
Psest_4219 +0.6 1.5 DNA polymerase I compare
Psest_4230 +0.6 3.4 Transcriptional regulator compare
Psest_1905 +0.6 1.8 Uncharacterized conserved protein, contains double-stranded beta-helix domain compare
Psest_0446 +0.6 2.9 hypothetical protein compare
Psest_0799 +0.6 3.4 Uncharacterized protein involved in response to NO compare
Psest_3518 +0.6 1.2 Transcriptional regulators compare
Psest_0958 +0.6 3.4 Oligoketide cyclase/lipid transport protein compare
Psest_2557 +0.6 1.4 Protein of unknown function (DUF2474). compare
Psest_3900 +0.6 4.3 Spermidine/putrescine-binding periplasmic protein compare
Psest_3973 +0.6 1.3 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_3937 +0.6 0.6 ATP-dependent protease HslVU, ATPase subunit compare
Psest_0367 +0.6 1.4 Predicted branched-chain amino acid permease (azaleucine resistance) compare
Psest_2775 +0.6 2.0 Glycerol-3-phosphate dehydrogenase compare
Psest_2092 +0.5 2.2 hypothetical protein compare
Psest_2581 +0.5 1.1 Uncharacterized protein conserved in bacteria compare
Psest_3936 +0.5 1.3 ATP-dependent protease HslVU, peptidase subunit compare
Psest_2015 +0.5 2.4 Type II secretory pathway, component PulD compare
Psest_1509 +0.5 3.4 quinolinate synthetase complex, A subunit compare
Psest_2229 +0.5 1.3 Uncharacterized protein conserved in bacteria compare
Psest_0106 +0.5 2.5 malonate decarboxylase, gamma subunit compare
Psest_0006 +0.5 1.8 alkyl hydroperoxide reductase, F subunit compare
Psest_3112 +0.5 2.3 electron transport complex, RnfABCDGE type, A subunit compare
Psest_3122 +0.5 2.5 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_1749 +0.5 3.3 Chemotaxis signal transduction protein compare
Psest_1723 +0.5 2.3 flagellar export protein FliJ compare
Psest_1158 +0.5 3.9 Predicted thiol oxidoreductase compare
Psest_3113 +0.5 1.0 electron transport complex, RnfABCDGE type, B subunit compare
Psest_0744 +0.5 0.8 Uncharacterized conserved protein compare
Psest_2023 +0.5 2.3 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_3433 +0.5 3.1 ATP-binding cassette protein, ChvD family compare
Psest_1282 +0.5 1.7 Amidases related to nicotinamidase compare
Psest_2959 +0.5 4.2 flagellar hook-associated protein FlgK compare
Psest_3762 +0.5 2.5 iron donor protein CyaY compare
Psest_1230 +0.5 1.4 Uncharacterized protein conserved in bacteria compare
Psest_3048 +0.5 1.7 hypothetical protein compare
Psest_1735 +0.5 3.6 flagellar biosynthetic protein FlhB compare
Psest_2017 +0.5 2.0 Predicted acyltransferase compare
Psest_3459 +0.5 1.8 hypothetical protein compare
Psest_1631 +0.5 1.0 Uncharacterized conserved small protein compare
Psest_2988 +0.5 2.9 aspartate kinase, monofunctional class compare
Psest_3934 +0.5 1.8 rRNA methylase, putative, group 2 compare
Psest_2520 +0.5 1.4 Predicted SAM-dependent methyltransferase compare
Psest_0532 +0.5 2.4 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB compare
Psest_0264 +0.5 3.6 monofunctional biosynthetic peptidoglycan transglycosylase compare
Psest_0551 +0.5 1.9 PEP phosphonomutase and related enzymes compare
Psest_3670 +0.5 3.6 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_2613 +0.5 0.9 hypothetical protein compare
Psest_1292 +0.5 3.4 monothiol glutaredoxin, Grx4 family compare
Psest_1444 +0.5 2.5 Curli production assembly/transport component CsgF. compare
Psest_0237 +0.5 1.7 intracellular protease, PfpI family compare
Psest_3784 +0.5 1.3 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_3871 +0.5 2.2 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) compare
Psest_0064 +0.5 1.9 Transcriptional regulator compare
Psest_3191 +0.5 1.2 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
Psest_1017 +0.4 3.6 Protein of unknown function (DUF3426). compare
Psest_2510 +0.4 3.1 chromosome segregation protein SMC, common bacterial type compare
Psest_4170 +0.4 0.9 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_4209 +0.4 1.7 Uncharacterized conserved small protein compare
Psest_4193 +0.4 2.8 Predicted signal transduction protein compare
Psest_2265 +0.4 1.4 Outer membrane protein compare
Psest_2565 +0.4 1.4 Transcriptional regulator compare
Psest_1231 +0.4 2.6 Na+/H+ antiporter NhaD and related arsenite permeases compare
Psest_1762 +0.4 1.5 cytochrome c-type biogenesis protein CcmI compare
Psest_4307 +0.4 1.6 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_1807 +0.4 2.8 Chain length determinant protein compare
Psest_2652 +0.4 1.5 Protein of unknown function (DUF1653). compare
Psest_0952 +0.4 1.7 Uncharacterized conserved protein compare
Psest_1443 +0.4 3.2 Uncharacterized protein involved in formation of curli polymers compare
Psest_3447 +0.4 1.1 Uncharacterized MobA-related protein compare
Psest_2716 +0.4 1.0 ABC-type multidrug transport system, ATPase component compare
Psest_2342 +0.4 2.8 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein compare
Psest_3070 +0.4 1.0 3-oxoadipyl-CoA thiolase compare
Psest_0364 +0.4 2.4 Gluconolactonase compare
Psest_0662 +0.4 1.0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0032 +0.4 3.5 D-alanyl-D-alanine carboxypeptidase compare
Psest_0459 +0.4 3.3 Predicted carbamoyl transferase, NodU family compare
Psest_0146 +0.4 2.2 Uncharacterized protein involved in outer membrane biogenesis compare
Psest_2285 +0.4 1.6 ATP-dependent protease La compare
Psest_3434 +0.4 3.7 Serine phosphatase RsbU, regulator of sigma subunit compare
Psest_3823 +0.4 1.9 hypothetical protein compare
Psest_3084 +0.4 0.8 methyltransferase, putative compare
Psest_3286 +0.4 2.0 Type II secretory pathway, prepilin signal peptidase PulO and related peptidases compare
Psest_1315 +0.4 1.2 hypothetical protein compare
Psest_3197 +0.4 2.1 hypothetical protein compare
Psest_0696 +0.4 2.0 hypothetical protein compare
Psest_3235 +0.4 3.4 Protein of unknown function (DUF1329). compare
Psest_3437 +0.4 1.4 diguanylate cyclase (GGDEF) domain compare
Psest_3824 +0.4 1.8 Predicted membrane protein compare
Psest_2507 +0.4 3.2 Flagellin and related hook-associated proteins compare
Psest_1886 +0.4 1.9 Uncharacterized protein conserved in bacteria compare
Psest_3979 +0.4 1.3 Fructose-2,6-bisphosphatase compare
Psest_2645 +0.4 2.1 Transcriptional regulator compare
Psest_0016 +0.4 1.6 ectoine/hydroxyectoine ABC transporter, ATP-binding protein compare
Psest_3092 +0.4 0.9 ribonuclease III, bacterial compare
Psest_2153 +0.4 1.8 formate dehydrogenase, gamma subunit compare
Psest_3101 +0.4 2.9 L-aspartate oxidase compare
Psest_2671 +0.4 1.5 Transcriptional regulator compare
Psest_3436 +0.4 2.0 Domain of unknown function (DUF1987). compare
Psest_1018 +0.4 1.8 ribosomal protein L11 methyltransferase compare
Psest_1860 +0.4 0.9 Uncharacterized conserved protein compare
Psest_1421 +0.4 1.2 Glutathione S-transferase compare
Psest_2020 +0.4 1.7 Uncharacterized protein involved in purine metabolism compare
Psest_2246 +0.4 1.3 arsenical resistance protein ArsH compare
Psest_4095 +0.4 1.3 Uncharacterized protein conserved in bacteria compare
Psest_2096 +0.4 1.0 Domain of unknown function (DUF1883). compare
Psest_3758 +0.4 3.3 Adenylate cyclase compare
Psest_3698 +0.4 2.3 Predicted exporter compare
Psest_3177 +0.4 1.0 hypothetical protein compare
Psest_2053 +0.4 1.4 Uncharacterized low-complexity proteins compare


Specific Phenotypes

For 2 genes in this experiment

For carbon source L-Glutamic acid monopotassium salt monohydrate in Pseudomonas stutzeri RCH2

For carbon source L-Glutamic acid monopotassium salt monohydrate across organisms