Experiment set12H20 for Pseudomonas stutzeri RCH2

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L-tyrosine disodium salt carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_0779 -4.8 -5.3 tyrosine aminotransferase (EC 2.6.1.57) (from data) conserved
Psest_2730 -4.7 -6.5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_3512 -4.5 -9.8 fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) (from data) compare
Psest_2849 -4.5 -10.4 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit compare
Psest_3511 -4.4 -9.2 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) conserved
Psest_3514 -4.2 -12.9 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) conserved
Psest_3513 -4.2 -5.0 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (from data) compare
Psest_2997 -4.1 -14.0 Long-chain fatty acid transport protein compare
Psest_1071 -4.0 -6.2 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains compare
Psest_2851 -4.0 -16.4 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit compare
Psest_1077 -3.8 -7.9 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) conserved
Psest_3510 -3.7 -11.9 Na+-dependent transporters of the SNF family compare
Psest_1557 -3.7 -8.6 Phosphoenolpyruvate carboxylase compare
Psest_0348 -3.6 -5.5 hypothetical protein compare
Psest_2729 -3.5 -7.0 Signal transduction histidine kinase compare
Psest_3836 -3.3 -5.4 L-lactate permease compare
Psest_1531 -3.1 -9.6 hypothetical protein compare
Psest_3872 -3.0 -7.1 FAD/FMN-containing dehydrogenases compare
Psest_3994 -2.9 -7.9 Signal transduction histidine kinase compare
Psest_1512 -2.7 -6.2 Predicted permease compare
Psest_1217 -2.7 -7.3 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein compare
Psest_1682 -2.5 -11.6 Periplasmic serine proteases (ClpP class) compare
Psest_3438 -2.3 -6.9 Glutamate dehydrogenase/leucine dehydrogenase compare
Psest_0781 -2.3 -6.0 phenylalanine-4-hydroxylase, monomeric form conserved
Psest_2297 -2.2 -8.6 hypothetical protein compare
Psest_0347 -2.1 -12.1 large component of pyruvate/D-alanine transporter (actP-like) (from data) compare
Psest_1123 -2.1 -9.4 adhesin-associated sorting protein (DUF1329) (from data) compare
Psest_2014 -1.9 -6.1 Isocitrate lyase (EC 4.1.3.1) (from data) compare
Psest_1957 -1.9 -7.6 outer membrane porin, OprD family. compare
Psest_2334 -1.7 -8.4 Uncharacterized protein conserved in bacteria compare
Psest_2464 -1.7 -5.8 Predicted permease compare
Psest_0319 -1.7 -5.4 Predicted ferric reductase compare
Psest_4222 -1.7 -6.1 Predicted Rossmann fold nucleotide-binding protein compare
Psest_1825 -1.7 -7.5 Predicted nucleoside-diphosphate sugar epimerases compare
Psest_2380 -1.5 -7.4 Uncharacterized conserved protein compare
Psest_2133 -1.5 -5.5 Uncharacterized protein conserved in bacteria compare
Psest_1335 -1.3 -5.2 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) compare
Psest_0307 -1.3 -5.8 Cytochrome B561 compare
Psest_1844 -1.1 -6.1 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) compare
Psest_3015 +1.2 5.7 hypothetical protein compare
Psest_1608 +1.2 8.7 glycerol-3-phosphate O-acyltransferase compare
Psest_1141 +1.3 6.6 diguanylate cyclase (GGDEF) domain compare
Psest_1955 +1.4 6.8 Predicted membrane protein compare
Psest_3079 +1.4 7.6 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) compare
Psest_4293 +1.4 6.2 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_2979 +1.4 8.0 sodium ion-translocating decarboxylase, beta subunit compare
Psest_4110 +1.4 8.5 Deoxycytidylate deaminase compare
Psest_0532 +1.5 5.9 tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB compare
Psest_2321 +1.6 5.1 methylisocitrate lyase compare
Psest_3075 +1.6 8.2 sodium/proline symporter compare
Psest_3078 +1.6 7.7 L-proline:Na+ symporter (from data) compare
Psest_2102 +1.8 15.1 5-methyltetrahydrofolate--homocysteine methyltransferase compare
Psest_0198 +1.9 10.9 TRAP transporter solute receptor, TAXI family compare
Psest_1055 +1.9 13.0 Saccharopine dehydrogenase and related proteins compare
Psest_1050 +1.9 13.8 Paraquat-inducible protein B compare
Psest_0197 +1.9 11.8 TRAP transporter, 4TM/12TM fusion protein compare
Psest_3016 +2.0 12.2 TonB-dependent vitamin B12 receptor compare
Psest_1462 +2.2 7.6 3-oxoacyl-[acyl-carrier-protein] synthase III compare
Psest_1048 +2.4 10.6 Uncharacterized paraquat-inducible protein A compare
Psest_3215 +2.4 5.7 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Psest_2980 +2.8 19.2 oxaloacetate decarboxylase alpha subunit compare
Psest_0956 +3.1 18.2 Transcriptional regulators compare
Psest_0455 +3.8 12.3 ADP-heptose:LPS heptosyltransferase compare


Specific phenotypes for carbon source L-tyrosine disodium salt across organisms