Experiment set12H19 for Pseudomonas stutzeri RCH2

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L-tyrosine disodium salt carbon source

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_2730 -4.8 -6.1 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0782 -4.8 -5.2 Transcriptional regulator of aromatic amino acids metabolism conserved
Psest_3513 -4.7 -5.2 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (from data) compare
Psest_1557 -4.5 -10.5 Phosphoenolpyruvate carboxylase compare
Psest_3512 -4.5 -10.9 fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) (from data) compare
Psest_3511 -4.1 -9.4 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) conserved
Psest_2851 -4.0 -17.9 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit compare
Psest_1512 -3.9 -10.0 Predicted permease compare
Psest_2849 -3.9 -9.8 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit compare
Psest_3514 -3.9 -11.9 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) conserved
Psest_3510 -3.8 -11.1 Na+-dependent transporters of the SNF family compare
Psest_1077 -3.7 -7.2 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) conserved
Psest_0348 -3.6 -6.0 hypothetical protein compare
Psest_2729 -3.6 -8.7 Signal transduction histidine kinase compare
Psest_1071 -3.5 -8.4 Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains compare
Psest_1531 -3.4 -12.4 hypothetical protein compare
Psest_3994 -3.3 -8.6 Signal transduction histidine kinase compare
Psest_1076 -3.0 -6.0 acetyl-CoA acetyltransferases conserved
Psest_2997 -3.0 -8.0 Long-chain fatty acid transport protein compare
Psest_2815 -2.8 -6.9 S-formylglutathione hydrolase compare
Psest_2464 -2.6 -8.9 Predicted permease compare
Psest_0781 -2.5 -5.7 phenylalanine-4-hydroxylase, monomeric form conserved
Psest_2297 -2.4 -11.5 hypothetical protein compare
Psest_1123 -2.4 -9.2 adhesin-associated sorting protein (DUF1329) (from data) compare
Psest_1682 -2.3 -9.5 Periplasmic serine proteases (ClpP class) compare
Psest_4222 -2.3 -6.6 Predicted Rossmann fold nucleotide-binding protein compare
Psest_4283 -2.3 -8.0 Spermidine/putrescine-binding periplasmic protein compare
Psest_3872 -2.3 -6.5 FAD/FMN-containing dehydrogenases compare
Psest_2334 -1.9 -11.3 Uncharacterized protein conserved in bacteria compare
Psest_1957 -1.8 -5.8 outer membrane porin, OprD family. compare
Psest_2132 -1.7 -7.8 Outer membrane protein compare
Psest_0349 -1.7 -5.8 DNA polymerase III, alpha subunit (gram-positive type) compare
Psest_3204 -1.7 -5.4 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_2133 -1.6 -5.4 Uncharacterized protein conserved in bacteria compare
Psest_2014 -1.6 -7.0 Isocitrate lyase (EC 4.1.3.1) (from data) compare
Psest_1217 -1.5 -5.4 Predicted soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein compare
Psest_1335 -1.5 -5.2 Long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) (from data) compare
Psest_4286 -1.5 -6.4 Glutamine synthetase compare
Psest_0347 -1.4 -7.8 large component of pyruvate/D-alanine transporter (actP-like) (from data) compare
Psest_0307 -1.4 -5.8 Cytochrome B561 compare
Psest_0419 -1.4 -8.2 Acyl-CoA dehydrogenase (EC 1.3.8.7) (from data) compare
Psest_0527 -1.2 -5.0 Uncharacterized conserved protein compare
Psest_2380 -1.1 -5.4 Uncharacterized conserved protein compare
Psest_4337 +1.0 6.9 TonB-dependent siderophore receptor compare
Psest_1608 +1.1 7.3 glycerol-3-phosphate O-acyltransferase compare
Psest_3015 +1.1 5.0 hypothetical protein compare
Psest_3075 +1.2 6.3 sodium/proline symporter compare
Psest_3079 +1.3 6.2 L-glutamate gamma-semialdehyde dehydrogenase (EC 1.2.1.88); Proline dehydrogenase (EC 1.5.5.2) (from data) compare
Psest_2979 +1.5 7.3 sodium ion-translocating decarboxylase, beta subunit compare
Psest_0197 +1.6 10.7 TRAP transporter, 4TM/12TM fusion protein compare
Psest_0198 +1.6 7.6 TRAP transporter solute receptor, TAXI family compare
Psest_3078 +1.7 8.0 L-proline:Na+ symporter (from data) compare
Psest_3016 +1.7 10.7 TonB-dependent vitamin B12 receptor compare
Psest_1050 +1.8 12.2 Paraquat-inducible protein B compare
Psest_2102 +1.8 14.7 5-methyltetrahydrofolate--homocysteine methyltransferase compare
Psest_1055 +2.1 13.4 Saccharopine dehydrogenase and related proteins compare
Psest_1048 +2.2 11.5 Uncharacterized paraquat-inducible protein A compare
Psest_3215 +2.3 5.6 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
Psest_2980 +2.4 17.0 oxaloacetate decarboxylase alpha subunit compare
Psest_3678 +2.5 5.1 acyl-phosphate glycerol 3-phosphate acyltransferase compare
Psest_1462 +2.7 12.1 3-oxoacyl-[acyl-carrier-protein] synthase III compare
Psest_0956 +3.2 18.8 Transcriptional regulators compare
Psest_0455 +3.8 10.6 ADP-heptose:LPS heptosyltransferase compare


Specific phenotypes for carbon source L-tyrosine disodium salt across organisms