Experiment set11S80 for Azospirillum brasilense Sp245
LB with 3-octanone 6.3476 mM
Group: stressMedia: LB + 3-octanone (6.3476 mM)
Culturing: AzoBra_ML2a, tube, Aerobic, at 30 (C), shaken=200 rpm
By: Cat Adams on 2-Apr-24
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride
Specific Phenotypes
For 3 genes in this experiment
For stress 3-octanone in Azospirillum brasilense Sp245
For stress 3-octanone across organisms
SEED Subsystems
| Subsystem | #Specific |
|---|---|
| Arginine Biosynthesis extended | 1 |
Metabolic Maps
Color code by fitness: see overview map or list of maps.
Maps containing gene(s) with specific phenotypes:
- Urea cycle and metabolism of amino groups
- Arginine and proline metabolism
- Biosynthesis of alkaloids derived from ornithine, lysine and nicotinic acid
MetaCyc Pathways
Pathways that contain genes with specific phenotypes:
| Pathway | #Steps | #Present | #Specific |
|---|---|---|---|
| L-ornithine biosynthesis I | 5 | 5 | 1 |
| L-arginine biosynthesis I (via L-ornithine) | 9 | 9 | 1 |
| L-arginine biosynthesis III (via N-acetyl-L-citrulline) | 9 | 8 | 1 |
| superpathway of arginine and polyamine biosynthesis | 17 | 17 | 1 |