Experiment set11S527 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with AMD2732

200 most important genes:

  gene name fitness t score description  
MPMX20_04530 -3.6 -15.4 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03017 -3.6 -13.3 hypothetical protein compare
MPMX20_00108 -3.4 -21.4 hypothetical protein compare
MPMX20_04489 -3.4 -14.1 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_04443 -3.4 -2.3 Sec-independent protein translocase protein TatB compare
MPMX20_00105 -3.4 -15.8 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03264 -3.4 -4.6 Chorismate synthase compare
MPMX20_03986 -3.3 -3.9 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04374 -3.3 -3.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03019 -3.2 -12.0 hypothetical protein compare
MPMX20_04768 -3.1 -9.5 hypothetical protein compare
MPMX20_03015 -3.1 -22.6 Phosphoglucosamine mutase compare
MPMX20_01958 -3.1 -1.1 Fumarase D compare
MPMX20_00109 -3.1 -16.9 hypothetical protein compare
MPMX20_00110 -3.0 -14.6 hypothetical protein compare
MPMX20_03020 -3.0 -9.6 hypothetical protein compare
MPMX20_03016 -3.0 -19.1 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01020 -3.0 -1.5 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_02591 -2.9 -5.6 DNA-binding protein H-NS compare
MPMX20_03018 -2.9 -3.4 hypothetical protein compare
MPMX20_04444 -2.8 -1.4 Sec-independent protein translocase protein TatA compare
MPMX20_03154 -2.7 -7.9 Inner membrane protein YejM compare
MPMX20_04375 -2.6 -5.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_03153 -2.6 -1.4 hypothetical protein compare
MPMX20_02020 -2.5 -13.1 Mannose-6-phosphate isomerase compare
MPMX20_03021 -2.4 -5.5 hypothetical protein compare
MPMX20_02881 -2.4 -4.2 hypothetical protein compare
MPMX20_04440 -2.3 -1.6 Transcription antitermination protein RfaH compare
MPMX20_03090 -2.3 -1.1 Methionine--tRNA ligase compare
MPMX20_02737 -2.2 -13.9 Tail-specific protease compare
MPMX20_02896 -2.2 -10.0 Lysozyme RrrD compare
MPMX20_04377 -2.2 -8.1 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_02768 -2.2 -2.5 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03385 -2.1 -5.1 hypothetical protein compare
MPMX20_01950 -2.1 -2.5 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_02887 -2.1 -3.8 hypothetical protein compare
MPMX20_01567 -2.1 -5.8 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_02879 -2.1 -3.8 hypothetical protein compare
MPMX20_01334 -2.1 -7.8 Phosphoglucomutase compare
MPMX20_03678 -2.1 -1.3 tRNA-Met compare
MPMX20_03479 -2.1 -2.0 30S ribosomal protein S16 compare
MPMX20_02861 -2.0 -9.7 hypothetical protein compare
MPMX20_02882 -2.0 -8.1 hypothetical protein compare
MPMX20_02919 -2.0 -4.3 hypothetical protein compare
MPMX20_04442 -2.0 -2.7 Sec-independent protein translocase protein TatC compare
MPMX20_01005 -1.9 -2.6 Transcriptional repressor NrdR compare
MPMX20_04650 -1.9 -1.9 tRNA modification GTPase MnmE compare
MPMX20_02876 -1.9 -6.6 hypothetical protein compare
MPMX20_04730 -1.9 -4.5 hypothetical protein compare
MPMX20_02929 -1.9 -1.6 hypothetical protein compare
MPMX20_03301 -1.9 -1.4 hypothetical protein compare
MPMX20_02894 -1.9 -5.1 hypothetical protein compare
MPMX20_02895 -1.9 -6.9 hypothetical protein compare
MPMX20_02927 -1.9 -4.1 hypothetical protein compare
MPMX20_02877 -1.8 -7.1 hypothetical protein compare
MPMX20_01064 -1.8 -9.8 Multidrug efflux pump subunit AcrB compare
MPMX20_02906 -1.7 -7.1 hypothetical protein compare
MPMX20_02878 -1.7 -6.9 hypothetical protein compare
MPMX20_02872 -1.7 -5.3 hypothetical protein compare
MPMX20_03490 -1.7 -3.5 SsrA-binding protein compare
MPMX20_01722 -1.7 -1.6 putative csgAB operon transcriptional regulatory protein compare
MPMX20_02920 -1.6 -5.0 hypothetical protein compare
MPMX20_00453 -1.6 -1.5 RNA-binding protein Hfq compare
MPMX20_02930 -1.6 -6.6 hypothetical protein compare
MPMX20_02905 -1.6 -6.6 hypothetical protein compare
MPMX20_03278 -1.6 -2.3 hypothetical protein compare
MPMX20_04137 -1.6 -3.2 Inner membrane protein YhcB compare
MPMX20_03022 -1.6 -1.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_02931 -1.6 -6.7 hypothetical protein compare
MPMX20_02909 -1.6 -4.9 hypothetical protein compare
MPMX20_04133 -1.6 -4.8 Stringent starvation protein A compare
MPMX20_02926 -1.6 -4.7 hypothetical protein compare
MPMX20_02907 -1.6 -5.9 hypothetical protein compare
MPMX20_00728 -1.6 -1.1 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_02863 -1.6 -7.1 hypothetical protein compare
MPMX20_02893 -1.6 -3.8 hypothetical protein compare
MPMX20_01352 -1.6 -5.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02870 -1.5 -7.6 hypothetical protein compare
MPMX20_02668 -1.5 -2.8 hypothetical protein compare
MPMX20_04463 -1.5 -2.9 DNA helicase II compare
MPMX20_03376 -1.5 -4.3 HTH-type transcriptional regulator MurR compare
MPMX20_03742 -1.5 -4.2 HTH-type transcriptional regulator GalR compare
MPMX20_02888 -1.5 -3.9 hypothetical protein compare
MPMX20_02889 -1.5 -9.1 hypothetical protein compare
MPMX20_04253 -1.5 -0.7 Malonate decarboxylase acyl carrier protein compare
MPMX20_02767 -1.5 -2.6 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02925 -1.4 -9.8 hypothetical protein compare
MPMX20_02871 -1.4 -6.2 hypothetical protein compare
MPMX20_02880 -1.4 -8.0 hypothetical protein compare
MPMX20_00899 -1.4 -1.3 Ribonuclease HI compare
MPMX20_03435 -1.4 -1.8 Pyridoxine 5'-phosphate synthase compare
MPMX20_02869 -1.4 -11.1 hypothetical protein compare
MPMX20_02704 -1.4 -2.1 hypothetical protein compare
MPMX20_02886 -1.4 -6.5 hypothetical protein compare
MPMX20_02918 -1.4 -3.8 hypothetical protein compare
MPMX20_02862 -1.4 -7.0 hypothetical protein compare
MPMX20_02924 -1.3 -5.6 hypothetical protein compare
MPMX20_01065 -1.3 -4.5 Multidrug efflux pump subunit AcrA compare
MPMX20_02874 -1.3 -9.0 hypothetical protein compare
MPMX20_02915 -1.3 -7.0 hypothetical protein compare
MPMX20_02891 -1.3 -7.9 hypothetical protein compare
MPMX20_02899 -1.3 -3.7 hypothetical protein compare
MPMX20_00258 -1.3 -3.0 Diacylglycerol kinase compare
MPMX20_01034 -1.3 -4.4 Long-chain acyl-CoA thioesterase FadM compare
MPMX20_02868 -1.3 -6.1 Protein UmuD compare
MPMX20_00986 -1.3 -6.4 Phosphate regulon transcriptional regulatory protein PhoB compare
MPMX20_01367 -1.3 -3.1 Tol-Pal system protein TolR compare
MPMX20_02917 -1.3 -3.3 hypothetical protein compare
MPMX20_01750 -1.3 -3.7 Negative regulator of flagellin synthesis compare
MPMX20_02922 -1.3 -5.0 hypothetical protein compare
MPMX20_02901 -1.3 -4.6 hypothetical protein compare
MPMX20_02883 -1.2 -4.4 hypothetical protein compare
MPMX20_03882 -1.2 -4.0 Outer membrane protein TolC compare
MPMX20_02873 -1.2 -4.1 hypothetical protein compare
MPMX20_04731 -1.2 -3.0 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02866 -1.2 -7.5 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_04601 -1.2 -1.4 DNA polymerase I compare
MPMX20_04585 -1.2 -3.1 HTH-type transcriptional repressor CsqR compare
MPMX20_04162 -1.2 -2.1 3-dehydroquinate dehydratase compare
MPMX20_00136 -1.2 -0.7 hypothetical protein compare
MPMX20_01368 -1.2 -2.1 hypothetical protein compare
MPMX20_00876 -1.2 -2.8 Peptidyl-tRNA hydrolase ArfB compare
MPMX20_01357 -1.2 -3.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01354 -1.2 -1.1 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02885 -1.2 -4.7 hypothetical protein compare
MPMX20_01021 -1.2 -2.6 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_02295 -1.2 -1.1 hypothetical protein compare
MPMX20_02411 -1.2 -2.7 hypothetical protein compare
MPMX20_00801 -1.2 -2.0 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_03455 -1.2 -3.7 hypothetical protein compare
MPMX20_00480 -1.1 -2.0 50S ribosomal protein L9 compare
MPMX20_04483 -1.1 -1.3 Lipid III flippase compare
MPMX20_01350 -1.1 -2.7 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_02549 -1.1 -2.4 hypothetical protein compare
MPMX20_02860 -1.1 -4.8 hypothetical protein compare
MPMX20_02916 -1.1 -2.5 hypothetical protein compare
MPMX20_04189 -1.1 -2.4 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03209 -1.1 -1.6 NADH-quinone oxidoreductase subunit K compare
MPMX20_04312 -1.1 -4.9 Glucose-1-phosphate adenylyltransferase compare
MPMX20_00987 -1.1 -5.5 Phosphate regulon sensor protein PhoR compare
MPMX20_04466 -1.1 -2.2 hypothetical protein compare
MPMX20_04200 -1.1 -3.9 HTH-type transcriptional regulator ZntR compare
MPMX20_04099 -1.1 -2.9 Intermembrane phospholipid transport system binding protein MlaD compare
MPMX20_04346 -1.1 -5.9 Zinc/cadmium/lead-transporting P-type ATPase compare
MPMX20_01162 -1.1 -3.5 hypothetical protein compare
MPMX20_02902 -1.1 -4.8 Serine/threonine-protein phosphatase 1 compare
MPMX20_01134 -1.1 -2.6 hypothetical protein compare
MPMX20_02875 -1.1 -5.6 hypothetical protein compare
MPMX20_00831 -1.0 -2.5 RNA polymerase-binding transcription factor DksA compare
MPMX20_01413 -1.0 -1.7 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_04688 -1.0 -5.5 hypothetical protein compare
MPMX20_01620 -1.0 -2.7 Acylphosphatase compare
MPMX20_01386 -1.0 -3.5 UDP-glucose 4-epimerase compare
MPMX20_04614 -1.0 -5.1 Ribose operon repressor compare
MPMX20_03447 -1.0 -3.9 ATP-dependent RNA helicase SrmB compare
MPMX20_00106 -1.0 -2.0 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_04028 -1.0 -1.0 hypothetical protein compare
MPMX20_01869 -1.0 -4.3 Succinylglutamate desuccinylase compare
MPMX20_02898 -1.0 -4.4 hypothetical protein compare
MPMX20_04639 -1.0 -0.9 Phosphate-binding protein PstS compare
MPMX20_03951 -1.0 -2.3 hypothetical protein compare
MPMX20_01866 -1.0 -2.0 Arginine N-succinyltransferase compare
MPMX20_02867 -1.0 -5.7 hypothetical protein compare
MPMX20_00107 -1.0 -3.4 Lipopolysaccharide core heptosyltransferase RfaQ compare
MPMX20_02904 -1.0 -3.2 hypothetical protein compare
MPMX20_04100 -1.0 -2.9 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX20_01356 -1.0 -3.7 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04626 -1.0 -1.5 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_01717 -1.0 -3.1 Chaperone protein YcdY compare
MPMX20_02903 -1.0 -2.5 hypothetical protein compare
MPMX20_01542 -1.0 -2.1 Cold shock-like protein CspD compare
MPMX20_02696 -1.0 -4.5 Murein tetrapeptide carboxypeptidase compare
MPMX20_04105 -1.0 -1.4 Lipopolysaccharide export system protein LptC compare
MPMX20_02884 -1.0 -4.9 hypothetical protein compare
MPMX20_02921 -1.0 -4.5 hypothetical protein compare
MPMX20_04306 -1.0 -2.4 Glycerol-3-phosphate regulon repressor compare
MPMX20_04004 -1.0 -3.3 Inner membrane protein YqjA compare
MPMX20_01509 -1.0 -3.1 hypothetical protein compare
MPMX20_01765 -1.0 -2.7 Ribonuclease E compare
MPMX20_03819 -1.0 -2.5 putative Fe(2+)-trafficking protein compare
MPMX20_01349 -1.0 -3.0 Citrate synthase compare
MPMX20_02864 -1.0 -1.9 hypothetical protein compare
MPMX20_01385 -1.0 -4.9 Galactose-1-phosphate uridylyltransferase compare
MPMX20_00286 -1.0 -2.8 Hydrogen peroxide-inducible genes activator compare
MPMX20_04505 -1.0 -3.8 HTH-type transcriptional regulator HdfR compare
MPMX20_00111 -0.9 -5.2 hypothetical protein compare
MPMX20_02643 -0.9 -3.1 hypothetical protein compare
MPMX20_04278 -0.9 -1.4 3-dehydroquinate synthase compare
MPMX20_03207 -0.9 -2.7 NADH-quinone oxidoreductase subunit M compare
MPMX20_01942 -0.9 -2.7 HTH-type transcriptional repressor BluR compare
MPMX20_02890 -0.9 -5.1 hypothetical protein compare
MPMX20_00241 -0.9 -3.9 Glucose-6-phosphate isomerase compare
MPMX20_01353 -0.9 -2.8 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04242 -0.9 -1.0 hypothetical protein compare
MPMX20_01983 -0.9 -3.2 Glutaredoxin 4 compare
MPMX20_03046 -0.9 -4.2 hypothetical protein compare
MPMX20_04038 -0.9 -2.8 Glucitol operon repressor compare
MPMX20_01665 -0.9 -1.6 hypothetical protein compare
MPMX20_03010 -0.9 -1.1 UDP-glucose 4-epimerase compare
MPMX20_02908 -0.9 -3.1 hypothetical protein compare


Specific Phenotypes

For 4 genes in this experiment

For mixed community TSB plate, 1:1 coculture with AMD2732 in Enterobacter sp. TBS_079

For mixed community TSB plate, 1:1 coculture with AMD2732 across organisms