Experiment set11S524 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010

200 most important genes:

  gene name fitness t score description  
MPMX20_04768 -4.2 -4.0 hypothetical protein compare
MPMX20_03264 -4.0 -5.4 Chorismate synthase compare
MPMX20_03154 -3.8 -7.7 Inner membrane protein YejM compare
MPMX20_00831 -3.8 -5.9 RNA polymerase-binding transcription factor DksA compare
MPMX20_04375 -3.7 -7.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_00110 -3.7 -18.3 hypothetical protein compare
MPMX20_00109 -3.7 -20.7 hypothetical protein compare
MPMX20_04530 -3.6 -13.0 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04489 -3.6 -19.0 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_00105 -3.5 -18.7 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_03017 -3.5 -15.6 hypothetical protein compare
MPMX20_04444 -3.4 -1.3 Sec-independent protein translocase protein TatA compare
MPMX20_01567 -3.3 -5.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03771 -3.3 -10.9 D-3-phosphoglycerate dehydrogenase compare
MPMX20_03153 -3.3 -1.4 hypothetical protein compare
MPMX20_03019 -3.2 -16.0 hypothetical protein compare
MPMX20_01566 -3.2 -12.0 Phosphoserine aminotransferase compare
MPMX20_03247 -3.1 -3.7 Amidophosphoribosyltransferase compare
MPMX20_01097 -3.1 -5.5 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_03338 -3.0 -3.6 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_03016 -3.0 -20.4 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_03986 -3.0 -3.3 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03018 -3.0 -5.3 hypothetical protein compare
MPMX20_00108 -3.0 -20.9 hypothetical protein compare
MPMX20_03003 -2.9 -8.9 Histidinol-phosphate aminotransferase compare
MPMX20_03004 -2.9 -8.6 Histidine biosynthesis bifunctional protein HisB compare
MPMX20_00693 -2.9 -7.6 Phosphoserine phosphatase compare
MPMX20_02591 -2.8 -6.5 DNA-binding protein H-NS compare
MPMX20_00927 -2.8 -12.1 Glutamate 5-kinase compare
MPMX20_03015 -2.8 -20.1 Phosphoglucosamine mutase compare
MPMX20_01098 -2.8 -3.3 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04442 -2.8 -4.2 Sec-independent protein translocase protein TatC compare
MPMX20_03006 -2.8 -6.6 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase compare
MPMX20_02755 -2.7 -4.8 KHG/KDPG aldolase compare
MPMX20_04650 -2.7 -2.7 tRNA modification GTPase MnmE compare
MPMX20_01334 -2.7 -9.8 Phosphoglucomutase compare
MPMX20_03354 -2.7 -7.2 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_00766 -2.6 -5.7 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_02881 -2.6 -3.1 hypothetical protein compare
MPMX20_03007 -2.6 -6.9 Imidazole glycerol phosphate synthase subunit HisF compare
MPMX20_03020 -2.6 -9.2 hypothetical protein compare
MPMX20_04077 -2.6 -7.9 Argininosuccinate synthase compare
MPMX20_00225 -2.6 -5.9 Phosphoribosylamine--glycine ligase compare
MPMX20_01950 -2.5 -3.4 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03681 -2.5 -11.0 Amino-acid acetyltransferase compare
MPMX20_00928 -2.5 -10.1 Gamma-glutamyl phosphate reductase compare
MPMX20_00241 -2.5 -7.1 Glucose-6-phosphate isomerase compare
MPMX20_00226 -2.5 -5.7 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03426 -2.5 -9.1 Phosphoribosylformylglycinamidine synthase compare
MPMX20_00768 -2.5 -10.6 3-isopropylmalate dehydrogenase compare
MPMX20_03466 -2.5 -10.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_02020 -2.5 -11.5 Mannose-6-phosphate isomerase compare
MPMX20_04496 -2.4 -7.0 Ketol-acid reductoisomerase (NADP(+)) compare
MPMX20_03641 -2.4 -7.4 Phosphoadenosine phosphosulfate reductase compare
MPMX20_04498 -2.4 -9.1 L-threonine dehydratase biosynthetic IlvA compare
MPMX20_03021 -2.4 -7.6 hypothetical protein compare
MPMX20_00929 -2.4 -1.6 tRNA-Thr compare
MPMX20_04730 -2.4 -5.3 hypothetical protein compare
MPMX20_04499 -2.4 -11.7 Dihydroxy-acid dehydratase compare
MPMX20_03490 -2.4 -5.2 SsrA-binding protein compare
MPMX20_00492 -2.4 -8.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
MPMX20_04483 -2.4 -1.6 Lipid III flippase compare
MPMX20_03468 -2.4 -6.8 T-protein compare
MPMX20_04279 -2.4 -2.7 Shikimate kinase 1 compare
MPMX20_00453 -2.3 -1.7 RNA-binding protein Hfq compare
MPMX20_02929 -2.3 -2.1 hypothetical protein compare
MPMX20_03005 -2.3 -6.3 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_03385 -2.3 -4.4 hypothetical protein compare
MPMX20_02767 -2.3 -3.8 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04162 -2.3 -3.1 3-dehydroquinate dehydratase compare
MPMX20_04524 -2.2 -12.2 Phosphoenolpyruvate carboxylase compare
MPMX20_01101 -2.2 -2.3 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_04374 -2.2 -3.1 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_04520 -2.2 -6.5 Argininosuccinate lyase compare
MPMX20_00712 -2.2 -9.6 Threonine synthase compare
MPMX20_00441 -2.2 -0.8 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_00570 -2.2 -12.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_03001 -2.2 -8.9 ATP phosphoribosyltransferase compare
MPMX20_01349 -2.2 -5.3 Citrate synthase compare
MPMX20_02920 -2.1 -6.0 hypothetical protein compare
MPMX20_02672 -2.1 -13.1 hypothetical protein compare
MPMX20_03022 -2.1 -2.1 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_00102 -2.1 -1.4 hypothetical protein compare
MPMX20_03008 -2.1 -6.1 Histidine biosynthesis bifunctional protein HisIE compare
MPMX20_01607 -2.1 -4.8 Outer membrane protein A compare
MPMX20_02240 -2.1 -10.5 hypothetical protein compare
MPMX20_03705 -2.1 -8.1 Diaminopimelate decarboxylase compare
MPMX20_02997 -2.1 -7.2 Exodeoxyribonuclease I compare
MPMX20_02549 -2.1 -3.7 hypothetical protein compare
MPMX20_00976 -2.1 -3.4 Pyrroline-5-carboxylate reductase compare
MPMX20_02896 -2.1 -10.4 Lysozyme RrrD compare
MPMX20_00899 -2.1 -1.6 Ribonuclease HI compare
MPMX20_03002 -2.0 -8.7 Histidinol dehydrogenase compare
MPMX20_02598 -2.0 -1.6 tRNA-Tyr compare
MPMX20_01357 -2.0 -4.2 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03509 -2.0 -1.3 hypothetical protein compare
MPMX20_00556 -2.0 -7.0 Ornithine carbamoyltransferase subunit F compare
MPMX20_00767 -2.0 -7.4 3-isopropylmalate dehydratase large subunit 1 compare
MPMX20_04443 -1.9 -3.2 Sec-independent protein translocase protein TatB compare
MPMX20_04552 -1.9 -3.9 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_03627 -1.9 -7.9 RNA polymerase sigma factor RpoS compare
MPMX20_04440 -1.9 -1.6 Transcription antitermination protein RfaH compare
MPMX20_04557 -1.9 -9.4 Sensor histidine kinase CpxA compare
MPMX20_02770 -1.9 -4.0 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_02589 -1.8 -12.3 Aldehyde-alcohol dehydrogenase compare
MPMX20_00544 -1.8 -3.2 Aspartate carbamoyltransferase catalytic subunit compare
MPMX20_04189 -1.8 -3.8 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_03479 -1.8 -1.6 30S ribosomal protein S16 compare
MPMX20_01118 -1.8 -0.6 hypothetical protein compare
MPMX20_04597 -1.8 -5.7 DNA-binding transcriptional regulator NtrC compare
MPMX20_02895 -1.8 -5.1 hypothetical protein compare
MPMX20_00711 -1.8 -8.9 Homoserine kinase compare
MPMX20_04529 -1.8 -5.0 5,10-methylenetetrahydrofolate reductase compare
MPMX20_02241 -1.8 -7.5 HTH-type transcriptional activator RhaS compare
MPMX20_00086 -1.8 -2.8 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02393 -1.8 -0.7 hypothetical protein compare
MPMX20_03227 -1.8 -3.2 Phosphate acetyltransferase compare
MPMX20_04133 -1.8 -4.9 Stringent starvation protein A compare
MPMX20_04119 -1.8 -1.2 DNA polymerase III subunit chi compare
MPMX20_04522 -1.7 -5.9 N-acetyl-gamma-glutamyl-phosphate reductase compare
MPMX20_00106 -1.7 -3.4 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_03498 -1.7 -2.0 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_01750 -1.7 -5.5 Negative regulator of flagellin synthesis compare
MPMX20_04170 -1.7 -2.0 DNA-binding protein Fis compare
MPMX20_04137 -1.7 -3.6 Inner membrane protein YhcB compare
MPMX20_02885 -1.7 -7.4 hypothetical protein compare
MPMX20_02344 -1.7 -1.0 hypothetical protein compare
MPMX20_02535 -1.7 -2.0 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_04640 -1.7 -1.8 Phosphate transport system permease protein PstC compare
MPMX20_02907 -1.6 -6.4 hypothetical protein compare
MPMX20_00740 -1.6 -4.0 Carbamoyl-phosphate synthase large chain compare
MPMX20_00739 -1.6 -2.2 Carbamoyl-phosphate synthase small chain compare
MPMX20_01367 -1.6 -4.2 Tol-Pal system protein TolR compare
MPMX20_01972 -1.6 -0.9 tRNA-Val compare
MPMX20_01741 -1.6 -1.5 Dihydroorotase compare
MPMX20_03882 -1.6 -5.7 Outer membrane protein TolC compare
MPMX20_02866 -1.6 -11.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_01989 -1.6 -1.9 hypothetical protein compare
MPMX20_02768 -1.6 -2.6 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01945 -1.6 -5.0 putative ATP-dependent transporter SufC compare
MPMX20_01765 -1.5 -3.3 Ribonuclease E compare
MPMX20_03643 -1.5 -7.6 Sulfite reductase [NADPH] flavoprotein alpha-component compare
MPMX20_00480 -1.5 -2.8 50S ribosomal protein L9 compare
MPMX20_01947 -1.5 -7.5 Cysteine desulfurase compare
MPMX20_04465 -1.5 -3.9 Tyrosine recombinase XerC compare
MPMX20_03407 -1.5 -2.0 Chaperone protein HscA compare
MPMX20_04278 -1.5 -2.1 3-dehydroquinate synthase compare
MPMX20_02928 -1.5 -2.6 hypothetical protein compare
MPMX20_02295 -1.5 -1.1 hypothetical protein compare
MPMX20_01382 -1.5 -1.4 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_04523 -1.5 -5.8 Acetylornithine deacetylase compare
MPMX20_04292 -1.5 -5.9 Transcriptional regulatory protein OmpR compare
MPMX20_01005 -1.5 -2.7 Transcriptional repressor NrdR compare
MPMX20_04731 -1.5 -4.1 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02593 -1.5 -8.7 Regulator of RpoS compare
MPMX20_04668 -1.5 -1.8 hypothetical protein compare
MPMX20_01356 -1.5 -6.4 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_04312 -1.5 -5.8 Glucose-1-phosphate adenylyltransferase compare
MPMX20_02867 -1.5 -7.3 hypothetical protein compare
MPMX20_04466 -1.4 -3.4 hypothetical protein compare
MPMX20_02908 -1.4 -5.3 hypothetical protein compare
MPMX20_03309 -1.4 -1.0 Phosphocarrier protein HPr compare
MPMX20_04028 -1.4 -1.6 hypothetical protein compare
MPMX20_02546 -1.4 -1.8 hypothetical protein compare
MPMX20_04110 -1.4 -3.5 Nitrogen regulatory protein compare
MPMX20_03630 -1.4 -4.2 5'/3'-nucleotidase SurE compare
MPMX20_03636 -1.4 -2.4 Adenylyl-sulfate kinase compare
MPMX20_02919 -1.4 -4.5 hypothetical protein compare
MPMX20_04377 -1.4 -6.1 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01020 -1.4 -1.0 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_04687 -1.4 -5.5 hypothetical protein compare
MPMX20_02513 -1.4 -6.4 Tryptophan synthase beta chain compare
MPMX20_02514 -1.4 -2.9 Tryptophan synthase alpha chain compare
MPMX20_01275 -1.4 -1.6 hypothetical protein compare
MPMX20_04497 -1.4 -5.3 HTH-type transcriptional regulator GltC compare
MPMX20_01551 -1.4 -3.7 Leucine-responsive regulatory protein compare
MPMX20_02893 -1.4 -2.9 hypothetical protein compare
MPMX20_00531 -1.4 -7.0 Anaerobic ribonucleoside-triphosphate reductase compare
MPMX20_03010 -1.4 -2.1 UDP-glucose 4-epimerase compare
MPMX20_04463 -1.4 -4.6 DNA helicase II compare
MPMX20_03267 -1.3 -2.5 Phosphohistidine phosphatase SixA compare
MPMX20_02916 -1.3 -3.4 hypothetical protein compare
MPMX20_02869 -1.3 -9.2 hypothetical protein compare
MPMX20_03095 -1.3 -1.3 hypothetical protein compare
MPMX20_01410 -1.3 -5.3 GTP 3',8-cyclase compare
MPMX20_02287 -1.3 -1.9 hypothetical protein compare
MPMX20_04314 -1.3 -8.1 1,4-alpha-glucan branching enzyme GlgB compare
MPMX20_00136 -1.3 -0.7 hypothetical protein compare
MPMX20_02701 -1.3 -1.4 Fatty acid metabolism regulator protein compare
MPMX20_00746 -1.3 -2.5 Protein ApaG compare
MPMX20_03356 -1.3 -7.4 Polyphosphate kinase compare
MPMX20_01561 -1.3 -8.4 Pyruvate formate-lyase 1-activating enzyme compare
MPMX20_03683 -1.3 -1.5 RecBCD enzyme subunit RecB compare
MPMX20_02870 -1.3 -8.2 hypothetical protein compare
MPMX20_02882 -1.3 -3.0 hypothetical protein compare
MPMX20_01946 -1.3 -8.1 FeS cluster assembly protein SufD compare
MPMX20_00391 -1.3 -4.3 hypothetical protein compare
MPMX20_03075 -1.2 -4.2 HTH-type transcriptional repressor NagR compare
MPMX20_02931 -1.2 -4.6 hypothetical protein compare
MPMX20_02878 -1.2 -3.8 hypothetical protein compare


Specific Phenotypes

For 14 genes in this experiment

For mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 in Enterobacter sp. TBS_079

For mixed community 0.1X LB plate, 1:1 coculture with Pseudomonas silesiensis TBS_010 across organisms