Experiment set11S512 for Enterobacter sp. TBS_079

Compare to:

0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2

200 most important genes:

  gene name fitness t score description  
MPMX20_03154 -4.0 -2.8 Inner membrane protein YejM compare
MPMX20_04530 -3.9 -15.1 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_04374 -3.6 -3.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00105 -3.6 -15.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04489 -3.5 -12.6 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03017 -3.3 -13.2 hypothetical protein compare
MPMX20_02696 -3.3 -8.5 Murein tetrapeptide carboxypeptidase compare
MPMX20_04443 -3.2 -2.2 Sec-independent protein translocase protein TatB compare
MPMX20_00108 -3.1 -19.5 hypothetical protein compare
MPMX20_00110 -3.1 -12.0 hypothetical protein compare
MPMX20_00109 -3.0 -15.3 hypothetical protein compare
MPMX20_03019 -3.0 -11.1 hypothetical protein compare
MPMX20_02591 -3.0 -5.6 DNA-binding protein H-NS compare
MPMX20_04375 -2.9 -5.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_03986 -2.8 -3.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03018 -2.8 -2.7 hypothetical protein compare
MPMX20_04768 -2.8 -1.9 hypothetical protein compare
MPMX20_01370 -2.7 -2.6 Peptidoglycan-associated lipoprotein compare
MPMX20_04444 -2.7 -1.3 Sec-independent protein translocase protein TatA compare
MPMX20_03016 -2.7 -18.6 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01950 -2.7 -1.8 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03390 -2.7 -3.7 Outer membrane protein assembly factor BamB compare
MPMX20_02894 -2.7 -6.0 hypothetical protein compare
MPMX20_03015 -2.6 -20.3 Phosphoglucosamine mutase compare
MPMX20_01334 -2.6 -7.4 Phosphoglucomutase compare
MPMX20_03020 -2.6 -7.8 hypothetical protein compare
MPMX20_00831 -2.5 -4.5 RNA polymerase-binding transcription factor DksA compare
MPMX20_01367 -2.4 -1.6 Tol-Pal system protein TolR compare
MPMX20_02672 -2.3 -8.9 hypothetical protein compare
MPMX20_01357 -2.3 -4.7 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_02767 -2.3 -2.7 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_03153 -2.3 -1.2 hypothetical protein compare
MPMX20_01607 -2.3 -3.8 Outer membrane protein A compare
MPMX20_03021 -2.3 -4.4 hypothetical protein compare
MPMX20_02768 -2.3 -2.2 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02896 -2.3 -10.4 Lysozyme RrrD compare
MPMX20_01368 -2.2 -2.2 hypothetical protein compare
MPMX20_01356 -2.2 -6.3 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_03385 -2.2 -5.0 hypothetical protein compare
MPMX20_01351 -2.2 -2.6 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02899 -2.1 -5.6 hypothetical protein compare
MPMX20_02873 -2.1 -8.1 hypothetical protein compare
MPMX20_01286 -2.1 -1.1 Sec-independent protein translocase protein TatE compare
MPMX20_02020 -2.0 -9.0 Mannose-6-phosphate isomerase compare
MPMX20_04442 -2.0 -2.4 Sec-independent protein translocase protein TatC compare
MPMX20_00419 -2.0 -6.0 Aspartate ammonia-lyase compare
MPMX20_03678 -2.0 -1.2 tRNA-Met compare
MPMX20_02882 -2.0 -8.9 hypothetical protein compare
MPMX20_02884 -1.9 -10.4 hypothetical protein compare
MPMX20_02893 -1.9 -5.7 hypothetical protein compare
MPMX20_04730 -1.9 -3.0 hypothetical protein compare
MPMX20_03264 -1.9 -4.3 Chorismate synthase compare
MPMX20_01353 -1.9 -3.6 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_02887 -1.9 -3.8 hypothetical protein compare
MPMX20_04140 -1.9 -3.8 Malate dehydrogenase compare
MPMX20_01369 -1.9 -3.1 Tol-Pal system protein TolB compare
MPMX20_02920 -1.9 -7.6 hypothetical protein compare
MPMX20_03756 -1.9 -3.5 FAD assembly factor SdhE compare
MPMX20_02997 -1.9 -5.3 Exodeoxyribonuclease I compare
MPMX20_03211 -1.8 -2.8 NADH-quinone oxidoreductase subunit I compare
MPMX20_01349 -1.8 -3.7 Citrate synthase compare
MPMX20_03216 -1.8 -5.9 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_00929 -1.8 -1.6 tRNA-Thr compare
MPMX20_00570 -1.8 -8.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04231 -1.8 -1.4 Bacterioferritin-associated ferredoxin compare
MPMX20_04670 -1.7 -1.7 hypothetical protein compare
MPMX20_02886 -1.7 -7.6 hypothetical protein compare
MPMX20_02919 -1.7 -5.3 hypothetical protein compare
MPMX20_02876 -1.7 -5.1 hypothetical protein compare
MPMX20_02926 -1.7 -4.8 hypothetical protein compare
MPMX20_02889 -1.7 -10.4 hypothetical protein compare
MPMX20_04141 -1.7 -3.9 Arginine repressor compare
MPMX20_01867 -1.7 -5.7 N-succinylglutamate 5-semialdehyde dehydrogenase compare
MPMX20_01366 -1.7 -1.6 Tol-Pal system protein TolQ compare
MPMX20_01868 -1.7 -8.2 N-succinylarginine dihydrolase compare
MPMX20_01342 -1.7 -2.7 hypothetical protein compare
MPMX20_01567 -1.7 -5.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_02878 -1.7 -7.2 hypothetical protein compare
MPMX20_04377 -1.7 -6.4 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_01750 -1.6 -3.9 Negative regulator of flagellin synthesis compare
MPMX20_03207 -1.6 -2.9 NADH-quinone oxidoreductase subunit M compare
MPMX20_02907 -1.6 -7.6 hypothetical protein compare
MPMX20_03409 -1.6 -1.1 Iron-binding protein IscA compare
MPMX20_01021 -1.6 -2.7 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_00899 -1.6 -1.1 Ribonuclease HI compare
MPMX20_03215 -1.6 -1.6 NADH-quinone oxidoreductase subunit E compare
MPMX20_01722 -1.6 -1.5 putative csgAB operon transcriptional regulatory protein compare
MPMX20_02905 -1.6 -7.2 hypothetical protein compare
MPMX20_04731 -1.6 -4.1 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_02891 -1.6 -7.6 hypothetical protein compare
MPMX20_02875 -1.6 -9.1 hypothetical protein compare
MPMX20_02871 -1.6 -7.3 hypothetical protein compare
MPMX20_04306 -1.6 -3.6 Glycerol-3-phosphate regulon repressor compare
MPMX20_02895 -1.6 -5.9 hypothetical protein compare
MPMX20_02307 -1.5 -1.1 hypothetical protein compare
MPMX20_02918 -1.5 -2.5 hypothetical protein compare
MPMX20_00441 -1.5 -0.7 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_03212 -1.5 -3.1 NADH-quinone oxidoreductase subunit H compare
MPMX20_02890 -1.5 -7.7 hypothetical protein compare
MPMX20_02863 -1.5 -10.4 hypothetical protein compare
MPMX20_01023 -1.5 -8.5 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_01352 -1.5 -5.0 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_01101 -1.5 -1.4 Peptidyl-prolyl cis-trans isomerase B compare
MPMX20_01019 -1.5 -4.1 Protoheme IX farnesyltransferase compare
MPMX20_04650 -1.5 -2.0 tRNA modification GTPase MnmE compare
MPMX20_02916 -1.5 -3.9 hypothetical protein compare
MPMX20_02422 -1.5 -4.2 Inner membrane ABC transporter permease protein YdcU compare
MPMX20_02881 -1.5 -2.3 hypothetical protein compare
MPMX20_02872 -1.5 -5.5 hypothetical protein compare
MPMX20_03213 -1.4 -4.3 NADH-quinone oxidoreductase subunit G compare
MPMX20_01020 -1.4 -1.1 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_02737 -1.4 -5.1 Tail-specific protease compare
MPMX20_04440 -1.4 -1.3 Transcription antitermination protein RfaH compare
MPMX20_03214 -1.4 -4.0 NADH-quinone oxidoreductase subunit F compare
MPMX20_03571 -1.4 -1.1 tRNA-Arg compare
MPMX20_02903 -1.4 -1.8 hypothetical protein compare
MPMX20_01005 -1.4 -2.1 Transcriptional repressor NrdR compare
MPMX20_02924 -1.4 -6.8 hypothetical protein compare
MPMX20_04518 -1.4 -2.8 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_02917 -1.4 -3.1 hypothetical protein compare
MPMX20_03206 -1.4 -3.7 NADH-quinone oxidoreductase subunit N compare
MPMX20_02901 -1.4 -7.3 hypothetical protein compare
MPMX20_01837 -1.4 -2.4 hypothetical protein compare
MPMX20_02862 -1.4 -7.8 hypothetical protein compare
MPMX20_01333 -1.4 -3.5 Negative modulator of initiation of replication compare
MPMX20_04532 -1.4 -1.4 Met repressor compare
MPMX20_02874 -1.3 -8.7 hypothetical protein compare
MPMX20_03285 -1.3 -0.8 hypothetical protein compare
MPMX20_02877 -1.3 -4.9 hypothetical protein compare
MPMX20_01974 -1.3 -1.4 Riboflavin synthase compare
MPMX20_02870 -1.3 -8.9 hypothetical protein compare
MPMX20_03022 -1.3 -0.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_01350 -1.3 -2.7 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_02906 -1.3 -4.4 hypothetical protein compare
MPMX20_03753 -1.3 -2.9 Tyrosine recombinase XerD compare
MPMX20_04483 -1.3 -0.9 Lipid III flippase compare
MPMX20_04465 -1.3 -2.3 Tyrosine recombinase XerC compare
MPMX20_02885 -1.3 -3.8 hypothetical protein compare
MPMX20_01022 -1.3 -5.9 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_03122 -1.3 -4.2 hypothetical protein compare
MPMX20_03742 -1.3 -3.5 HTH-type transcriptional regulator GalR compare
MPMX20_02880 -1.3 -7.9 hypothetical protein compare
MPMX20_00111 -1.3 -7.3 hypothetical protein compare
MPMX20_02344 -1.3 -0.9 hypothetical protein compare
MPMX20_03046 -1.3 -4.9 hypothetical protein compare
MPMX20_00666 -1.3 -1.5 tRNA-Leu compare
MPMX20_04137 -1.3 -2.8 Inner membrane protein YhcB compare
MPMX20_03094 -1.3 -2.7 HTH-type transcriptional regulator MlrA compare
MPMX20_03225 -1.3 -4.0 hypothetical protein compare
MPMX20_01869 -1.3 -3.5 Succinylglutamate desuccinylase compare
MPMX20_04301 -1.3 -1.7 Fe/S biogenesis protein NfuA compare
MPMX20_03217 -1.3 -2.2 NADH-quinone oxidoreductase subunit B compare
MPMX20_02861 -1.3 -6.7 hypothetical protein compare
MPMX20_02860 -1.2 -4.7 hypothetical protein compare
MPMX20_04556 -1.2 -3.7 Transcriptional regulatory protein CpxR compare
MPMX20_01364 -1.2 -2.4 hypothetical protein compare
MPMX20_03095 -1.2 -1.4 hypothetical protein compare
MPMX20_01855 -1.2 -3.2 hypothetical protein compare
MPMX20_03443 -1.2 -3.5 Anti-sigma-E factor RseA compare
MPMX20_02866 -1.2 -7.4 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_00480 -1.2 -1.7 50S ribosomal protein L9 compare
MPMX20_02888 -1.2 -4.7 hypothetical protein compare
MPMX20_03354 -1.2 -3.4 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_03440 -1.2 -1.4 Elongation factor 4 compare
MPMX20_04687 -1.2 -5.5 hypothetical protein compare
MPMX20_00794 -1.2 -2.6 Cell division protein ZapD compare
MPMX20_03426 -1.2 -5.4 Phosphoribosylformylglycinamidine synthase compare
MPMX20_02898 -1.2 -7.7 hypothetical protein compare
MPMX20_02925 -1.2 -6.6 hypothetical protein compare
MPMX20_04105 -1.2 -1.3 Lipopolysaccharide export system protein LptC compare
MPMX20_04601 -1.2 -1.1 DNA polymerase I compare
MPMX20_02930 -1.2 -3.3 hypothetical protein compare
MPMX20_01587 -1.1 -4.8 Outer membrane porin F compare
MPMX20_02869 -1.1 -8.5 hypothetical protein compare
MPMX20_02766 -1.1 -1.1 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_02931 -1.1 -3.8 hypothetical protein compare
MPMX20_04006 -1.1 -3.3 Protein YqjC compare
MPMX20_00106 -1.1 -1.3 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_02598 -1.1 -1.4 tRNA-Tyr compare
MPMX20_04243 -1.1 -0.7 hypothetical protein compare
MPMX20_02472 -1.1 -3.5 Phage shock protein A compare
MPMX20_02902 -1.1 -3.9 Serine/threonine-protein phosphatase 1 compare
MPMX20_02867 -1.1 -5.7 hypothetical protein compare
MPMX20_02908 -1.1 -5.1 hypothetical protein compare
MPMX20_04466 -1.1 -2.1 hypothetical protein compare
MPMX20_02295 -1.1 -1.0 hypothetical protein compare
MPMX20_03208 -1.1 -2.8 NADH-quinone oxidoreductase subunit L compare
MPMX20_04133 -1.1 -3.3 Stringent starvation protein A compare
MPMX20_02707 -1.1 -1.4 Septum site-determining protein MinC compare
MPMX20_00494 -1.1 -1.4 hypothetical protein compare
MPMX20_01097 -1.0 -3.2 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02927 -1.0 -3.9 hypothetical protein compare
MPMX20_02879 -1.0 -1.8 hypothetical protein compare
MPMX20_02098 -1.0 -4.4 HTH-type transcriptional repressor RspR compare
MPMX20_01354 -1.0 -1.0 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02883 -1.0 -2.2 hypothetical protein compare
MPMX20_04111 -1.0 -2.7 RNase adapter protein RapZ compare
MPMX20_00728 -1.0 -0.8 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_02921 -1.0 -5.6 hypothetical protein compare
MPMX20_00226 -1.0 -3.1 Bifunctional purine biosynthesis protein PurH compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2 in Enterobacter sp. TBS_079

For mixed community 0.1X LB plate, 1:1 coculture with Enterobacter ludwigii PH2 across organisms