Experiment set11S511 for Enterobacter sp. TBS_079

Compare to:

TSB plate, 1:1 coculture with Enterobacter ludwigii PH2

200 most important genes:

  gene name fitness t score description  
MPMX20_02696 -5.1 -6.0 Murein tetrapeptide carboxypeptidase compare
MPMX20_04530 -4.2 -13.6 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03154 -4.0 -2.8 Inner membrane protein YejM compare
MPMX20_00831 -3.5 -4.2 RNA polymerase-binding transcription factor DksA compare
MPMX20_01370 -3.4 -2.3 Peptidoglycan-associated lipoprotein compare
MPMX20_00105 -3.4 -14.1 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_04489 -3.3 -12.5 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03390 -3.3 -2.3 Outer membrane protein assembly factor BamB compare
MPMX20_03019 -3.2 -9.5 hypothetical protein compare
MPMX20_00109 -3.1 -14.1 hypothetical protein compare
MPMX20_01958 -3.0 -1.0 Fumarase D compare
MPMX20_01357 -3.0 -4.9 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_00110 -3.0 -13.0 hypothetical protein compare
MPMX20_00108 -2.9 -18.8 hypothetical protein compare
MPMX20_02591 -2.9 -5.8 DNA-binding protein H-NS compare
MPMX20_04374 -2.8 -3.8 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_03986 -2.8 -3.8 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_03385 -2.7 -4.6 hypothetical protein compare
MPMX20_03396 -2.7 -4.1 Nucleoside diphosphate kinase compare
MPMX20_01950 -2.7 -1.8 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03021 -2.7 -3.2 hypothetical protein compare
MPMX20_03678 -2.6 -1.3 tRNA-Met compare
MPMX20_04443 -2.6 -2.6 Sec-independent protein translocase protein TatB compare
MPMX20_03017 -2.6 -12.2 hypothetical protein compare
MPMX20_04768 -2.6 -1.8 hypothetical protein compare
MPMX20_02768 -2.6 -1.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_03015 -2.5 -17.9 Phosphoglucosamine mutase compare
MPMX20_01972 -2.5 -1.2 tRNA-Val compare
MPMX20_01368 -2.5 -1.7 hypothetical protein compare
MPMX20_01334 -2.5 -7.0 Phosphoglucomutase compare
MPMX20_03018 -2.5 -3.4 hypothetical protein compare
MPMX20_03209 -2.5 -1.7 NADH-quinone oxidoreductase subunit K compare
MPMX20_03020 -2.4 -6.2 hypothetical protein compare
MPMX20_01351 -2.3 -2.3 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02672 -2.3 -7.9 hypothetical protein compare
MPMX20_03153 -2.3 -1.2 hypothetical protein compare
MPMX20_04375 -2.3 -5.5 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01353 -2.3 -3.5 Succinate dehydrogenase iron-sulfur subunit compare
MPMX20_04442 -2.3 -1.6 Sec-independent protein translocase protein TatC compare
MPMX20_01349 -2.3 -3.1 Citrate synthase compare
MPMX20_03016 -2.3 -13.9 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01352 -2.2 -5.2 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03756 -2.2 -3.6 FAD assembly factor SdhE compare
MPMX20_02918 -2.2 -7.0 hypothetical protein compare
MPMX20_04377 -2.2 -7.6 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_04140 -2.1 -2.6 Malate dehydrogenase compare
MPMX20_02920 -2.1 -6.7 hypothetical protein compare
MPMX20_01607 -2.1 -3.8 Outer membrane protein A compare
MPMX20_00419 -2.0 -7.0 Aspartate ammonia-lyase compare
MPMX20_02896 -2.0 -12.0 Lysozyme RrrD compare
MPMX20_00570 -2.0 -7.8 putative BsuMI modification methylase subunit YdiO compare
MPMX20_01020 -2.0 -1.4 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_04440 -2.0 -1.4 Transcription antitermination protein RfaH compare
MPMX20_02737 -2.0 -6.3 Tail-specific protease compare
MPMX20_00728 -2.0 -0.9 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03216 -2.0 -5.8 NADH-quinone oxidoreductase subunit C/D compare
MPMX20_02885 -2.0 -4.6 hypothetical protein compare
MPMX20_02919 -2.0 -5.1 hypothetical protein compare
MPMX20_03338 -2.0 -2.3 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04639 -2.0 -1.2 Phosphate-binding protein PstS compare
MPMX20_02020 -1.9 -8.1 Mannose-6-phosphate isomerase compare
MPMX20_04730 -1.9 -3.9 hypothetical protein compare
MPMX20_03212 -1.9 -2.9 NADH-quinone oxidoreductase subunit H compare
MPMX20_03210 -1.9 -2.9 NADH-quinone oxidoreductase subunit J compare
MPMX20_00453 -1.9 -1.3 RNA-binding protein Hfq compare
MPMX20_03264 -1.9 -3.3 Chorismate synthase compare
MPMX20_04444 -1.9 -1.3 Sec-independent protein translocase protein TatA compare
MPMX20_02882 -1.9 -8.3 hypothetical protein compare
MPMX20_01022 -1.9 -6.7 Cytochrome bo(3) ubiquinol oxidase subunit 1 compare
MPMX20_01369 -1.9 -3.1 Tol-Pal system protein TolB compare
MPMX20_00030 -1.8 -1.5 hypothetical protein compare
MPMX20_03206 -1.8 -3.8 NADH-quinone oxidoreductase subunit N compare
MPMX20_02892 -1.8 -8.4 hypothetical protein compare
MPMX20_01869 -1.8 -5.6 Succinylglutamate desuccinylase compare
MPMX20_01350 -1.8 -3.1 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_01356 -1.8 -5.8 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_01097 -1.8 -3.9 N5-carboxyaminoimidazole ribonucleotide synthase compare
MPMX20_02098 -1.8 -5.5 HTH-type transcriptional repressor RspR compare
MPMX20_01868 -1.7 -8.2 N-succinylarginine dihydrolase compare
MPMX20_00197 -1.7 -1.0 tRNA-Tyr compare
MPMX20_02887 -1.7 -4.1 hypothetical protein compare
MPMX20_01021 -1.7 -2.7 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_03213 -1.7 -4.5 NADH-quinone oxidoreductase subunit G compare
MPMX20_02872 -1.7 -6.3 hypothetical protein compare
MPMX20_00111 -1.7 -9.5 hypothetical protein compare
MPMX20_02732 -1.7 -2.0 PhoP/PhoQ regulator MgrB compare
MPMX20_03214 -1.7 -4.2 NADH-quinone oxidoreductase subunit F compare
MPMX20_01355 -1.7 -0.6 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_03435 -1.7 -1.8 Pyridoxine 5'-phosphate synthase compare
MPMX20_03208 -1.7 -3.4 NADH-quinone oxidoreductase subunit L compare
MPMX20_01023 -1.7 -9.0 Cytochrome bo(3) ubiquinol oxidase subunit 2 compare
MPMX20_02903 -1.7 -2.5 hypothetical protein compare
MPMX20_03217 -1.7 -2.2 NADH-quinone oxidoreductase subunit B compare
MPMX20_01587 -1.7 -6.7 Outer membrane porin F compare
MPMX20_04731 -1.6 -5.2 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_04585 -1.6 -3.1 HTH-type transcriptional repressor CsqR compare
MPMX20_03211 -1.6 -2.5 NADH-quinone oxidoreductase subunit I compare
MPMX20_01019 -1.6 -4.0 Protoheme IX farnesyltransferase compare
MPMX20_03409 -1.6 -1.1 Iron-binding protein IscA compare
MPMX20_04460 -1.6 -3.4 hypothetical protein compare
MPMX20_04105 -1.6 -1.6 Lipopolysaccharide export system protein LptC compare
MPMX20_03047 -1.6 -2.9 dCTP deaminase compare
MPMX20_03742 -1.6 -3.8 HTH-type transcriptional regulator GalR compare
MPMX20_00480 -1.6 -2.4 50S ribosomal protein L9 compare
MPMX20_04466 -1.6 -3.1 hypothetical protein compare
MPMX20_02899 -1.6 -4.4 hypothetical protein compare
MPMX20_02889 -1.6 -9.5 hypothetical protein compare
MPMX20_01434 -1.5 -1.3 putative protein YbiI compare
MPMX20_02931 -1.5 -6.6 hypothetical protein compare
MPMX20_04141 -1.5 -3.4 Arginine repressor compare
MPMX20_01366 -1.5 -1.8 Tol-Pal system protein TolQ compare
MPMX20_02877 -1.5 -6.2 hypothetical protein compare
MPMX20_02895 -1.5 -6.0 hypothetical protein compare
MPMX20_02890 -1.5 -7.8 hypothetical protein compare
MPMX20_04559 -1.5 -2.0 Superoxide dismutase [Mn] compare
MPMX20_02870 -1.5 -8.9 hypothetical protein compare
MPMX20_03443 -1.5 -4.5 Anti-sigma-E factor RseA compare
MPMX20_02901 -1.5 -8.2 hypothetical protein compare
MPMX20_02878 -1.5 -4.8 hypothetical protein compare
MPMX20_00456 -1.5 -4.8 Modulator of FtsH protease HflC compare
MPMX20_03386 -1.4 -0.7 putative protein YfgJ compare
MPMX20_03046 -1.4 -4.7 hypothetical protein compare
MPMX20_02926 -1.4 -3.7 hypothetical protein compare
MPMX20_00234 -1.4 -5.6 Transcriptional repressor IclR compare
MPMX20_02295 -1.4 -1.2 hypothetical protein compare
MPMX20_02886 -1.4 -4.4 hypothetical protein compare
MPMX20_02863 -1.4 -9.4 hypothetical protein compare
MPMX20_02924 -1.4 -5.5 hypothetical protein compare
MPMX20_02880 -1.4 -8.9 hypothetical protein compare
MPMX20_04518 -1.4 -2.8 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_03301 -1.4 -1.7 hypothetical protein compare
MPMX20_04188 -1.4 -3.2 hypothetical protein compare
MPMX20_02888 -1.4 -5.9 hypothetical protein compare
MPMX20_03260 -1.4 -2.2 hypothetical protein compare
MPMX20_04670 -1.4 -1.3 hypothetical protein compare
MPMX20_04668 -1.4 -1.3 hypothetical protein compare
MPMX20_04389 -1.4 -4.3 HTH-type transcriptional regulator KipR compare
MPMX20_03490 -1.4 -3.4 SsrA-binding protein compare
MPMX20_01367 -1.4 -2.7 Tol-Pal system protein TolR compare
MPMX20_02893 -1.4 -4.0 hypothetical protein compare
MPMX20_01567 -1.4 -4.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_03022 -1.3 -0.9 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04242 -1.3 -2.0 hypothetical protein compare
MPMX20_02894 -1.3 -4.5 hypothetical protein compare
MPMX20_02869 -1.3 -10.5 hypothetical protein compare
MPMX20_03248 -1.3 -3.1 Colicin V production protein compare
MPMX20_04137 -1.3 -2.8 Inner membrane protein YhcB compare
MPMX20_03770 -1.3 -3.4 5-formyltetrahydrofolate cyclo-ligase compare
MPMX20_02930 -1.3 -5.8 hypothetical protein compare
MPMX20_02908 -1.3 -5.4 hypothetical protein compare
MPMX20_02147 -1.3 -4.3 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_02927 -1.3 -3.7 hypothetical protein compare
MPMX20_02907 -1.3 -6.7 hypothetical protein compare
MPMX20_04483 -1.3 -0.9 Lipid III flippase compare
MPMX20_02873 -1.3 -3.2 hypothetical protein compare
MPMX20_02864 -1.3 -3.8 hypothetical protein compare
MPMX20_04650 -1.3 -1.9 tRNA modification GTPase MnmE compare
MPMX20_02874 -1.3 -8.9 hypothetical protein compare
MPMX20_02897 -1.3 -3.2 hypothetical protein compare
MPMX20_03753 -1.2 -3.1 Tyrosine recombinase XerD compare
MPMX20_03207 -1.2 -2.7 NADH-quinone oxidoreductase subunit M compare
MPMX20_00022 -1.2 -2.4 Inner membrane protein YidG compare
MPMX20_04292 -1.2 -4.6 Transcriptional regulatory protein OmpR compare
MPMX20_01766 -1.2 -4.7 Ribosomal large subunit pseudouridine synthase C compare
MPMX20_02928 -1.2 -2.7 hypothetical protein compare
MPMX20_02770 -1.2 -2.2 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_03308 -1.2 -2.7 Cysteine synthase A compare
MPMX20_04110 -1.2 -2.3 Nitrogen regulatory protein compare
MPMX20_02884 -1.2 -4.3 hypothetical protein compare
MPMX20_01865 -1.2 -6.6 Succinylornithine transaminase compare
MPMX20_04688 -1.2 -6.0 hypothetical protein compare
MPMX20_01354 -1.2 -0.8 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_02925 -1.2 -7.9 hypothetical protein compare
MPMX20_04465 -1.2 -2.4 Tyrosine recombinase XerC compare
MPMX20_03334 -1.2 -1.0 hypothetical protein compare
MPMX20_03674 -1.2 -2.8 Sulfur acceptor protein CsdE compare
MPMX20_01256 -1.2 -1.2 hypothetical protein compare
MPMX20_02902 -1.2 -4.7 Serine/threonine-protein phosphatase 1 compare
MPMX20_02668 -1.2 -1.8 hypothetical protein compare
MPMX20_03354 -1.2 -3.7 Phosphoribosylformylglycinamidine cyclo-ligase compare
MPMX20_02904 -1.2 -5.7 hypothetical protein compare
MPMX20_02767 -1.2 -2.1 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02876 -1.2 -4.4 hypothetical protein compare
MPMX20_02866 -1.2 -7.4 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase compare
MPMX20_04463 -1.1 -2.5 DNA helicase II compare
MPMX20_03391 -1.1 -2.9 hypothetical protein compare
MPMX20_02891 -1.1 -4.0 hypothetical protein compare
MPMX20_03405 -1.1 -0.8 Protein IscX compare
MPMX20_02868 -1.1 -5.1 Protein UmuD compare
MPMX20_02915 -1.1 -5.7 hypothetical protein compare
MPMX20_02883 -1.1 -5.2 hypothetical protein compare
MPMX20_02549 -1.1 -2.4 hypothetical protein compare
MPMX20_02997 -1.1 -4.1 Exodeoxyribonuclease I compare
MPMX20_00226 -1.1 -3.0 Bifunctional purine biosynthesis protein PurH compare
MPMX20_01552 -1.1 -0.8 hypothetical protein compare
MPMX20_04298 -1.1 -1.9 hypothetical protein compare
MPMX20_02917 -1.1 -3.2 hypothetical protein compare
MPMX20_02860 -1.1 -4.1 hypothetical protein compare
MPMX20_02909 -1.1 -4.3 hypothetical protein compare
MPMX20_00241 -1.1 -3.7 Glucose-6-phosphate isomerase compare


Specific Phenotypes

None in this experiment

For Enterobacter sp. TBS_079 in mixed community experiments

For mixed community TSB plate, 1:1 coculture with Enterobacter ludwigii PH2 across organisms