Experiment set11S506 for Enterobacter sp. TBS_079

Compare to:

M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2

200 most important genes:

  gene name fitness t score description  
MPMX20_03986 -3.1 -2.1 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_00831 -2.9 -2.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_03385 -2.9 -4.0 hypothetical protein compare
MPMX20_04028 -2.8 -1.8 hypothetical protein compare
MPMX20_02864 -2.7 -3.8 hypothetical protein compare
MPMX20_02919 -2.6 -8.2 hypothetical protein compare
MPMX20_00105 -2.6 -10.5 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_02591 -2.4 -2.4 DNA-binding protein H-NS compare
MPMX20_00136 -2.4 -0.9 hypothetical protein compare
MPMX20_03154 -2.4 -3.3 Inner membrane protein YejM compare
MPMX20_00108 -2.4 -14.4 hypothetical protein compare
MPMX20_04530 -2.4 -9.0 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_03405 -2.3 -1.2 Protein IscX compare
MPMX20_04730 -2.3 -3.5 hypothetical protein compare
MPMX20_01543 -2.3 -1.3 ATP-dependent Clp protease adapter protein ClpS compare
MPMX20_03020 -2.2 -5.5 hypothetical protein compare
MPMX20_04375 -2.2 -3.3 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_04489 -2.2 -8.8 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_02896 -2.1 -7.7 Lysozyme RrrD compare
MPMX20_04628 -2.1 -1.3 ATP synthase protein I compare
MPMX20_00480 -2.1 -1.4 50S ribosomal protein L9 compare
MPMX20_04768 -2.0 -1.4 hypothetical protein compare
MPMX20_00110 -2.0 -7.8 hypothetical protein compare
MPMX20_01370 -2.0 -1.4 Peptidoglycan-associated lipoprotein compare
MPMX20_03636 -2.0 -2.0 Adenylyl-sulfate kinase compare
MPMX20_01334 -2.0 -4.1 Phosphoglucomutase compare
MPMX20_01958 -2.0 -0.7 Fumarase D compare
MPMX20_04194 -2.0 -1.0 Peptide deformylase compare
MPMX20_04444 -2.0 -1.0 Sec-independent protein translocase protein TatA compare
MPMX20_04443 -2.0 -1.3 Sec-independent protein translocase protein TatB compare
MPMX20_01244 -1.9 -4.1 Ferric enterobactin transport system permease protein FepD compare
MPMX20_03017 -1.9 -8.1 hypothetical protein compare
MPMX20_03260 -1.9 -1.3 hypothetical protein compare
MPMX20_00109 -1.9 -10.1 hypothetical protein compare
MPMX20_02860 -1.9 -5.5 hypothetical protein compare
MPMX20_02920 -1.9 -5.5 hypothetical protein compare
MPMX20_01357 -1.9 -2.9 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_03019 -1.8 -5.8 hypothetical protein compare
MPMX20_04133 -1.8 -4.0 Stringent starvation protein A compare
MPMX20_02883 -1.8 -6.3 hypothetical protein compare
MPMX20_03756 -1.7 -2.1 FAD assembly factor SdhE compare
MPMX20_02930 -1.7 -6.7 hypothetical protein compare
MPMX20_03016 -1.7 -11.3 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01239 -1.7 -5.7 Enterochelin esterase compare
MPMX20_01352 -1.7 -2.3 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_02903 -1.7 -1.6 hypothetical protein compare
MPMX20_02020 -1.7 -7.7 Mannose-6-phosphate isomerase compare
MPMX20_02696 -1.7 -5.0 Murein tetrapeptide carboxypeptidase compare
MPMX20_02772 -1.7 -2.5 Isochorismatase family protein YecD compare
MPMX20_01837 -1.7 -1.6 hypothetical protein compare
MPMX20_01989 -1.6 -1.6 hypothetical protein compare
MPMX20_03015 -1.6 -12.0 Phosphoglucosamine mutase compare
MPMX20_04053 -1.6 -2.9 DnaA initiator-associating protein DiaA compare
MPMX20_03435 -1.6 -1.1 Pyridoxine 5'-phosphate synthase compare
MPMX20_01350 -1.6 -1.9 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_03851 -1.6 -3.6 Biopolymer transport protein ExbB compare
MPMX20_02898 -1.6 -6.8 hypothetical protein compare
MPMX20_02146 -1.6 -3.5 1,2-phenylacetyl-CoA epoxidase, subunit E compare
MPMX20_01974 -1.6 -1.1 Riboflavin synthase compare
MPMX20_02871 -1.5 -5.4 hypothetical protein compare
MPMX20_02927 -1.5 -3.5 hypothetical protein compare
MPMX20_02928 -1.5 -3.0 hypothetical protein compare
MPMX20_03376 -1.5 -2.9 HTH-type transcriptional regulator MurR compare
MPMX20_01021 -1.5 -1.8 Cytochrome bo(3) ubiquinol oxidase subunit 3 compare
MPMX20_00666 -1.5 -1.3 tRNA-Leu compare
MPMX20_02888 -1.5 -4.5 hypothetical protein compare
MPMX20_03197 -1.5 -4.1 o-succinylbenzoate synthase compare
MPMX20_01351 -1.5 -1.0 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02344 -1.5 -0.9 hypothetical protein compare
MPMX20_02924 -1.5 -4.0 hypothetical protein compare
MPMX20_02894 -1.5 -2.5 hypothetical protein compare
MPMX20_04306 -1.5 -1.7 Glycerol-3-phosphate regulon repressor compare
MPMX20_01903 -1.5 -1.4 Thioredoxin/glutathione peroxidase BtuE compare
MPMX20_00419 -1.5 -2.4 Aspartate ammonia-lyase compare
MPMX20_02861 -1.5 -4.1 hypothetical protein compare
MPMX20_02889 -1.4 -7.0 hypothetical protein compare
MPMX20_02873 -1.4 -4.5 hypothetical protein compare
MPMX20_02884 -1.4 -7.6 hypothetical protein compare
MPMX20_02912 -1.4 -0.5 hypothetical protein compare
MPMX20_02902 -1.4 -4.3 Serine/threonine-protein phosphatase 1 compare
MPMX20_02918 -1.4 -2.5 hypothetical protein compare
MPMX20_02931 -1.4 -4.7 hypothetical protein compare
MPMX20_04374 -1.4 -2.1 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_00266 -1.4 -1.8 Phage shock protein G compare
MPMX20_02887 -1.4 -2.5 hypothetical protein compare
MPMX20_00086 -1.3 -2.0 Bifunctional (p)ppGpp synthase/hydrolase SpoT compare
MPMX20_02879 -1.3 -2.7 hypothetical protein compare
MPMX20_02876 -1.3 -3.3 hypothetical protein compare
MPMX20_02915 -1.3 -5.1 hypothetical protein compare
MPMX20_04231 -1.3 -0.8 Bacterioferritin-associated ferredoxin compare
MPMX20_01056 -1.3 -1.7 50S ribosomal protein L31 type B compare
MPMX20_03018 -1.3 -1.2 hypothetical protein compare
MPMX20_02882 -1.3 -3.7 hypothetical protein compare
MPMX20_04344 -1.3 -0.7 hypothetical protein compare
MPMX20_02925 -1.3 -8.4 hypothetical protein compare
MPMX20_03122 -1.3 -2.6 hypothetical protein compare
MPMX20_02872 -1.3 -4.4 hypothetical protein compare
MPMX20_01346 -1.2 -3.5 5-oxoprolinase subunit C compare
MPMX20_01410 -1.2 -3.6 GTP 3',8-cyclase compare
MPMX20_01940 -1.2 -3.1 putative two-component-system connector protein YcgZ compare
MPMX20_00728 -1.2 -0.6 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_04200 -1.2 -2.0 HTH-type transcriptional regulator ZntR compare
MPMX20_01950 -1.2 -0.8 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_03090 -1.2 -0.6 Methionine--tRNA ligase compare
MPMX20_04140 -1.2 -1.2 Malate dehydrogenase compare
MPMX20_02229 -1.2 -2.8 HTH-type transcriptional activator AmpR compare
MPMX20_03424 -1.2 -3.0 Quorum-sensing regulator protein G compare
MPMX20_02279 -1.2 -1.8 hypothetical protein compare
MPMX20_02643 -1.2 -2.5 hypothetical protein compare
MPMX20_00340 -1.2 -1.1 hypothetical protein compare
MPMX20_02893 -1.2 -3.1 hypothetical protein compare
MPMX20_03617 -1.2 -2.3 hypothetical protein compare
MPMX20_02768 -1.2 -0.8 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_01756 -1.1 -3.3 Flagellar basal-body rod protein FlgF compare
MPMX20_01296 -1.1 -2.5 Ribosomal silencing factor RsfS compare
MPMX20_00023 -1.1 -3.5 D-serine dehydratase compare
MPMX20_00811 -1.1 -3.1 hypothetical protein compare
MPMX20_03233 -1.1 -5.2 HTH-type transcriptional regulator GntR compare
MPMX20_01607 -1.1 -1.7 Outer membrane protein A compare
MPMX20_04485 -1.1 -2.4 dTDP-fucosamine acetyltransferase compare
MPMX20_02907 -1.1 -3.4 hypothetical protein compare
MPMX20_02076 -1.1 -2.9 Bicarbonate transport ATP-binding protein CmpD compare
MPMX20_04687 -1.1 -3.7 hypothetical protein compare
MPMX20_02946 -1.1 -1.3 Flagellar biosynthetic protein FliQ compare
MPMX20_01345 -1.1 -3.0 5-oxoprolinase subunit B compare
MPMX20_02892 -1.1 -4.8 hypothetical protein compare
MPMX20_04442 -1.1 -0.7 Sec-independent protein translocase protein TatC compare
MPMX20_01952 -1.1 -0.6 hypothetical protein compare
MPMX20_02870 -1.1 -7.0 hypothetical protein compare
MPMX20_01238 -1.1 -4.9 Ferrienterobactin receptor compare
MPMX20_04377 -1.1 -4.0 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_00022 -1.1 -1.7 Inner membrane protein YidG compare
MPMX20_02868 -1.1 -4.4 Protein UmuD compare
MPMX20_03390 -1.1 -2.0 Outer membrane protein assembly factor BamB compare
MPMX20_02863 -1.0 -5.6 hypothetical protein compare
MPMX20_04569 -1.0 -2.9 HTH-type transcriptional regulator RafR compare
MPMX20_01099 -1.0 -1.2 hypothetical protein compare
MPMX20_03490 -1.0 -1.6 SsrA-binding protein compare
MPMX20_02917 -1.0 -2.7 hypothetical protein compare
MPMX20_01852 -1.0 -2.7 Selenide, water dikinase compare
MPMX20_02628 -1.0 -2.4 hypothetical protein compare
MPMX20_01732 -1.0 -2.2 hypothetical protein compare
MPMX20_02895 -1.0 -2.7 hypothetical protein compare
MPMX20_01441 -1.0 -1.1 hypothetical protein compare
MPMX20_00693 -1.0 -2.9 Phosphoserine phosphatase compare
MPMX20_00505 -1.0 -2.9 Gamma-glutamylcyclotransferase family protein ytfP compare
MPMX20_00216 -1.0 -3.9 Thiamine-phosphate synthase compare
MPMX20_02862 -1.0 -4.0 hypothetical protein compare
MPMX20_00722 -1.0 -2.8 Na(+)/H(+) antiporter NhaA compare
MPMX20_03046 -1.0 -4.2 hypothetical protein compare
MPMX20_03509 -1.0 -0.7 hypothetical protein compare
MPMX20_03167 -1.0 -3.2 Ecotin compare
MPMX20_01948 -1.0 -4.1 Cysteine desulfuration protein SufE compare
MPMX20_04314 -1.0 -5.0 1,4-alpha-glucan branching enzyme GlgB compare
MPMX20_01793 -1.0 -2.7 Multiple stress resistance protein BhsA compare
MPMX20_02901 -1.0 -4.1 hypothetical protein compare
MPMX20_03880 -1.0 -1.8 hypothetical protein compare
MPMX20_02715 -1.0 -2.9 2-iminobutanoate/2-iminopropanoate deaminase compare
MPMX20_02540 -1.0 -2.6 hypothetical protein compare
MPMX20_03212 -1.0 -1.2 NADH-quinone oxidoreductase subunit H compare
MPMX20_04272 -1.0 -0.5 hypothetical protein compare
MPMX20_04460 -1.0 -2.4 hypothetical protein compare
MPMX20_01722 -1.0 -0.7 putative csgAB operon transcriptional regulatory protein compare
MPMX20_03957 -1.0 -3.0 hypothetical protein compare
MPMX20_04279 -1.0 -0.7 Shikimate kinase 1 compare
MPMX20_00556 -1.0 -2.7 Ornithine carbamoyltransferase subunit F compare
MPMX20_03613 -0.9 -1.8 Hydrogenase maturation factor HypC compare
MPMX20_01749 -0.9 -2.3 Flagella synthesis protein FlgN compare
MPMX20_04118 -0.9 -4.9 Cytosol aminopeptidase compare
MPMX20_01152 -0.9 -2.5 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase compare
MPMX20_00873 -0.9 -0.9 Protein rof compare
MPMX20_03581 -0.9 -3.1 Nicotinamide-nucleotide amidohydrolase PncC compare
MPMX20_03700 -0.9 -1.8 hypothetical protein compare
MPMX20_00570 -0.9 -3.6 putative BsuMI modification methylase subunit YdiO compare
MPMX20_04688 -0.9 -3.2 hypothetical protein compare
MPMX20_01308 -0.9 -1.7 Magnesium and cobalt efflux protein CorC compare
MPMX20_02899 -0.9 -1.3 hypothetical protein compare
MPMX20_02874 -0.9 -6.4 hypothetical protein compare
MPMX20_03828 -0.9 -3.0 hypothetical protein compare
MPMX20_04704 -0.9 -2.8 Protein TraV compare
MPMX20_02255 -0.9 -1.7 Metal-binding protein ZinT compare
MPMX20_01323 -0.9 -2.8 N-acetylglucosamine-6-phosphate deacetylase compare
MPMX20_03763 -0.9 -1.5 Glycine cleavage system H protein compare
MPMX20_00156 -0.9 -3.0 DNA-binding transcriptional repressor YiaJ compare
MPMX20_02929 -0.9 -1.4 hypothetical protein compare
MPMX20_01972 -0.9 -0.6 tRNA-Val compare
MPMX20_02973 -0.9 -1.9 hypothetical protein compare
MPMX20_03568 -0.9 -2.4 Glutamate--cysteine ligase compare
MPMX20_00073 -0.9 -3.2 HTH-type transcriptional regulator MlrA compare
MPMX20_04004 -0.9 -1.9 Inner membrane protein YqjA compare
MPMX20_01062 -0.9 -3.6 Hemolysin expression-modulating protein Hha compare
MPMX20_00456 -0.9 -2.5 Modulator of FtsH protease HflC compare
MPMX20_01670 -0.9 -3.0 L-cystine transport system permease protein YecS compare
MPMX20_04057 -0.9 -1.5 Protein/nucleic acid deglycase 2 compare
MPMX20_02897 -0.9 -1.6 hypothetical protein compare
MPMX20_02509 -0.9 -1.7 5'-3' exoribonuclease compare
MPMX20_02594 -0.9 -2.9 putative NTE family protein compare
MPMX20_04318 -0.9 -1.9 Thermoresistant gluconokinase compare
MPMX20_02149 -0.9 -1.9 3-hydroxyadipyl-CoA dehydrogenase compare
MPMX20_01805 -0.9 -2.9 Inner membrane ABC transporter permease protein YdcV compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 in Enterobacter sp. TBS_079

For mixed community M9 plate, 1:1 coculture with Paraburkholderia phenoluptrix CO2 across organisms