Experiment set11S497 for Enterobacter sp. TBS_079

Compare to:

1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1

200 most important genes:

  gene name fitness t score description  
MPMX20_03571 -3.6 -1.3 tRNA-Arg compare
MPMX20_03678 -3.4 -1.2 tRNA-Met compare
MPMX20_04374 -2.7 -2.7 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
MPMX20_02591 -2.7 -1.9 DNA-binding protein H-NS compare
MPMX20_04530 -2.7 -12.5 Bifunctional aspartokinase/homoserine dehydrogenase 2 compare
MPMX20_00105 -2.7 -11.3 N-acetylgalactosamine-N, N'-diacetylbacillosaminyl-diphospho-undecaprenol 4-alpha-N-acetylgalactosaminyltransferase compare
MPMX20_00108 -2.7 -15.0 hypothetical protein compare
MPMX20_02864 -2.3 -4.1 hypothetical protein compare
MPMX20_02879 -2.3 -3.1 hypothetical protein compare
MPMX20_02899 -2.3 -4.8 hypothetical protein compare
MPMX20_03475 -2.2 -2.7 hypothetical protein compare
MPMX20_04443 -2.2 -1.5 Sec-independent protein translocase protein TatB compare
MPMX20_03851 -2.2 -3.6 Biopolymer transport protein ExbB compare
MPMX20_03385 -2.2 -3.8 hypothetical protein compare
MPMX20_04768 -2.2 -1.5 hypothetical protein compare
MPMX20_04444 -2.1 -1.1 Sec-independent protein translocase protein TatA compare
MPMX20_03986 -2.1 -2.5 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase compare
MPMX20_04194 -2.1 -1.1 Peptide deformylase compare
MPMX20_00109 -2.1 -10.7 hypothetical protein compare
MPMX20_04489 -2.1 -9.9 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
MPMX20_03016 -2.1 -14.0 Mannose-1-phosphate guanylyltransferase RfbM compare
MPMX20_01334 -2.1 -4.0 Phosphoglucomutase compare
MPMX20_03015 -2.1 -14.3 Phosphoglucosamine mutase compare
MPMX20_03020 -2.0 -6.0 hypothetical protein compare
MPMX20_03017 -2.0 -8.8 hypothetical protein compare
MPMX20_03163 -2.0 -1.4 hypothetical protein compare
MPMX20_03238 -2.0 -2.7 Dihydroneopterin triphosphate 2'-epimerase compare
MPMX20_04133 -1.9 -4.0 Stringent starvation protein A compare
MPMX20_00110 -1.9 -9.1 hypothetical protein compare
MPMX20_02020 -1.9 -7.7 Mannose-6-phosphate isomerase compare
MPMX20_04731 -1.9 -6.5 Plasmid-derived single-stranded DNA-binding protein compare
MPMX20_03019 -1.9 -5.8 hypothetical protein compare
MPMX20_03290 -1.9 -1.0 tRNA-Ala compare
MPMX20_04298 -1.9 -2.1 hypothetical protein compare
MPMX20_04377 -1.9 -5.6 putative 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD compare
MPMX20_04466 -1.8 -2.5 hypothetical protein compare
MPMX20_04730 -1.8 -4.0 hypothetical protein compare
MPMX20_03479 -1.7 -1.3 30S ribosomal protein S16 compare
MPMX20_01357 -1.7 -2.5 Succinate--CoA ligase [ADP-forming] subunit alpha compare
MPMX20_01665 -1.7 -2.3 hypothetical protein compare
MPMX20_02896 -1.7 -8.3 Lysozyme RrrD compare
MPMX20_01054 -1.7 -2.5 Transcriptional repressor RcnR compare
MPMX20_02295 -1.7 -0.8 hypothetical protein compare
MPMX20_01972 -1.7 -0.8 tRNA-Val compare
MPMX20_02882 -1.6 -5.0 hypothetical protein compare
MPMX20_01352 -1.6 -3.1 Succinate dehydrogenase flavoprotein subunit compare
MPMX20_03154 -1.6 -4.2 Inner membrane protein YejM compare
MPMX20_02891 -1.6 -7.1 hypothetical protein compare
MPMX20_04008 -1.6 -1.6 Inner membrane protein YqjE compare
MPMX20_01370 -1.6 -1.6 Peptidoglycan-associated lipoprotein compare
MPMX20_01347 -1.6 -2.8 5-oxoprolinase subunit A compare
MPMX20_02885 -1.6 -4.9 hypothetical protein compare
MPMX20_00831 -1.6 -3.0 RNA polymerase-binding transcription factor DksA compare
MPMX20_01350 -1.6 -1.9 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_00746 -1.6 -1.5 Protein ApaG compare
MPMX20_02890 -1.6 -7.9 hypothetical protein compare
MPMX20_03756 -1.5 -2.1 FAD assembly factor SdhE compare
MPMX20_02767 -1.5 -1.1 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_02894 -1.5 -3.5 hypothetical protein compare
MPMX20_04231 -1.5 -0.9 Bacterioferritin-associated ferredoxin compare
MPMX20_04053 -1.5 -3.1 DnaA initiator-associating protein DiaA compare
MPMX20_04375 -1.5 -3.9 putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
MPMX20_01852 -1.5 -3.6 Selenide, water dikinase compare
MPMX20_01351 -1.5 -1.4 Succinate dehydrogenase hydrophobic membrane anchor subunit compare
MPMX20_02895 -1.5 -4.9 hypothetical protein compare
MPMX20_03018 -1.5 -1.4 hypothetical protein compare
MPMX20_02886 -1.4 -6.0 hypothetical protein compare
MPMX20_01533 -1.4 -2.3 hypothetical protein compare
MPMX20_02768 -1.4 -0.9 Crossover junction endodeoxyribonuclease RuvC compare
MPMX20_02098 -1.4 -3.3 HTH-type transcriptional repressor RspR compare
MPMX20_00728 -1.3 -0.6 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_01020 -1.3 -1.0 Cytochrome bo(3) ubiquinol oxidase subunit 4 compare
MPMX20_01607 -1.3 -2.0 Outer membrane protein A compare
MPMX20_04101 -1.3 -5.3 Intermembrane phospholipid transport system ATP-binding protein MlaF compare
MPMX20_02892 -1.3 -6.0 hypothetical protein compare
MPMX20_02203 -1.3 -1.2 hypothetical protein compare
MPMX20_04628 -1.3 -1.4 ATP synthase protein I compare
MPMX20_04687 -1.3 -5.3 hypothetical protein compare
MPMX20_02546 -1.3 -0.9 hypothetical protein compare
MPMX20_02897 -1.3 -1.9 hypothetical protein compare
MPMX20_02919 -1.3 -3.4 hypothetical protein compare
MPMX20_03209 -1.3 -0.9 NADH-quinone oxidoreductase subunit K compare
MPMX20_02058 -1.3 -2.5 hypothetical protein compare
MPMX20_03623 -1.2 -2.2 Transcriptional regulator HosA compare
MPMX20_02549 -1.2 -1.2 hypothetical protein compare
MPMX20_01975 -1.2 -7.3 Cyclopropane-fatty-acyl-phospholipid synthase compare
MPMX20_00136 -1.2 -0.6 hypothetical protein compare
MPMX20_02884 -1.2 -5.7 hypothetical protein compare
MPMX20_01333 -1.2 -2.2 Negative modulator of initiation of replication compare
MPMX20_04427 -1.2 -0.6 5S ribosomal RNA compare
MPMX20_04396 -1.2 -2.6 Ribosomal RNA small subunit methyltransferase J compare
MPMX20_04389 -1.2 -3.2 HTH-type transcriptional regulator KipR compare
MPMX20_02901 -1.2 -5.6 hypothetical protein compare
MPMX20_03264 -1.2 -2.4 Chorismate synthase compare
MPMX20_02437 -1.2 -2.4 hypothetical protein compare
MPMX20_01950 -1.2 -1.1 Major outer membrane lipoprotein Lpp 1 compare
MPMX20_04140 -1.2 -1.6 Malate dehydrogenase compare
MPMX20_03390 -1.2 -2.5 Outer membrane protein assembly factor BamB compare
MPMX20_01367 -1.2 -0.8 Tol-Pal system protein TolR compare
MPMX20_01846 -1.2 -1.6 hypothetical protein compare
MPMX20_01793 -1.1 -2.3 Multiple stress resistance protein BhsA compare
MPMX20_02736 -1.1 -2.2 Protease HtpX compare
MPMX20_01085 -1.1 -2.6 HTH-type transcriptional regulator CueR compare
MPMX20_01356 -1.1 -3.3 Succinate--CoA ligase [ADP-forming] subunit beta compare
MPMX20_00793 -1.1 -1.1 DNA gyrase inhibitor YacG compare
MPMX20_02997 -1.1 -2.0 Exodeoxyribonuclease I compare
MPMX20_01368 -1.1 -1.1 hypothetical protein compare
MPMX20_01005 -1.1 -1.3 Transcriptional repressor NrdR compare
MPMX20_00176 -1.1 -2.1 Cold shock protein CspA compare
MPMX20_03627 -1.1 -3.4 RNA polymerase sigma factor RpoS compare
MPMX20_03755 -1.1 -3.0 Inner membrane protein YgfX compare
MPMX20_00022 -1.1 -1.7 Inner membrane protein YidG compare
MPMX20_04300 -1.1 -1.9 Putative ribose-phosphate pyrophosphokinase compare
MPMX20_01239 -1.1 -4.8 Enterochelin esterase compare
MPMX20_04440 -1.1 -0.7 Transcription antitermination protein RfaH compare
MPMX20_02687 -1.1 -3.2 HTH-type transcriptional regulator CdhR compare
MPMX20_00315 -1.1 -3.5 Alpha-D-ribose 1-methylphosphonate 5-triphosphate diphosphatase compare
MPMX20_00772 -1.1 -3.1 Acetolactate synthase isozyme 3 small subunit compare
MPMX20_02860 -1.1 -3.8 hypothetical protein compare
MPMX20_04314 -1.1 -4.8 1,4-alpha-glucan branching enzyme GlgB compare
MPMX20_02941 -1.1 -2.8 hypothetical protein compare
MPMX20_02182 -1.1 -2.0 hypothetical protein compare
MPMX20_02904 -1.1 -4.8 hypothetical protein compare
MPMX20_02920 -1.0 -4.0 hypothetical protein compare
MPMX20_00909 -1.0 -2.7 Omega-amidase YafV compare
MPMX20_03153 -1.0 -0.5 hypothetical protein compare
MPMX20_01722 -1.0 -0.7 putative csgAB operon transcriptional regulatory protein compare
MPMX20_04137 -1.0 -1.7 Inner membrane protein YhcB compare
MPMX20_03429 -1.0 -2.4 Phosphatidylglycerophosphatase C compare
MPMX20_01806 -1.0 -2.5 Spermidine/putrescine transport system permease protein PotB compare
MPMX20_03217 -1.0 -1.0 NADH-quinone oxidoreductase subunit B compare
MPMX20_01144 -1.0 -1.8 2-dehydropantoate 2-reductase compare
MPMX20_00580 -1.0 -3.3 Antirestriction protein KlcA compare
MPMX20_03266 -1.0 -1.6 Endonuclease MutS2 compare
MPMX20_03304 -1.0 -1.5 hypothetical protein compare
MPMX20_01468 -1.0 -3.3 Isoaspartyl peptidase compare
MPMX20_00073 -1.0 -3.8 HTH-type transcriptional regulator MlrA compare
MPMX20_02929 -1.0 -1.3 hypothetical protein compare
MPMX20_04518 -1.0 -1.5 Soluble pyridine nucleotide transhydrogenase compare
MPMX20_03208 -1.0 -1.4 NADH-quinone oxidoreductase subunit L compare
MPMX20_01342 -1.0 -1.3 hypothetical protein compare
MPMX20_02876 -1.0 -2.6 hypothetical protein compare
MPMX20_00816 -1.0 -1.9 hypothetical protein compare
MPMX20_04100 -1.0 -2.4 Intermembrane phospholipid transport system permease protein MlaE compare
MPMX20_00456 -1.0 -3.1 Modulator of FtsH protease HflC compare
MPMX20_00733 -1.0 -2.3 PTS system sorbose-specific EIIC component compare
MPMX20_04667 -1.0 -4.4 Tyrosine recombinase XerC compare
MPMX20_03401 -1.0 -2.7 3-mercaptopyruvate sulfurtransferase compare
MPMX20_03969 -1.0 -1.6 hypothetical protein compare
MPMX20_00419 -1.0 -2.9 Aspartate ammonia-lyase compare
MPMX20_04243 -1.0 -0.6 hypothetical protein compare
MPMX20_00452 -1.0 -2.2 tRNA dimethylallyltransferase compare
MPMX20_01389 -1.0 -1.7 Multidrug efflux pump accessory protein AcrZ compare
MPMX20_01355 -1.0 -0.3 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_02978 -1.0 -3.4 Ferric aerobactin receptor compare
MPMX20_04639 -1.0 -0.6 Phosphate-binding protein PstS compare
MPMX20_02165 -1.0 -2.4 HTH-type transcriptional regulator DmlR compare
MPMX20_01244 -1.0 -3.1 Ferric enterobactin transport system permease protein FepD compare
MPMX20_04472 -0.9 -1.8 Protein HemX compare
MPMX20_03843 -0.9 -1.6 hypothetical protein compare
MPMX20_00801 -0.9 -1.1 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare
MPMX20_04366 -0.9 -1.7 Outer-membrane lipoprotein carrier protein compare
MPMX20_01216 -0.9 -2.7 Thioredoxin reductase compare
MPMX20_03662 -0.9 -1.5 putative protein YqcC compare
MPMX20_00111 -0.9 -5.4 hypothetical protein compare
MPMX20_00998 -0.9 -1.3 Sec translocon accessory complex subunit YajC compare
MPMX20_03510 -0.9 -4.3 IS3 family transposase IS1222 compare
MPMX20_02909 -0.9 -3.2 hypothetical protein compare
MPMX20_02931 -0.9 -4.6 hypothetical protein compare
MPMX20_03631 -0.9 -2.9 tRNA pseudouridine synthase D compare
MPMX20_02590 -0.9 -5.0 Thymidine kinase compare
MPMX20_00441 -0.9 -0.4 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04585 -0.9 -1.6 HTH-type transcriptional repressor CsqR compare
MPMX20_03490 -0.9 -1.7 SsrA-binding protein compare
MPMX20_01903 -0.9 -1.2 Thioredoxin/glutathione peroxidase BtuE compare
MPMX20_02507 -0.9 -1.9 Ribosomal large subunit pseudouridine synthase B compare
MPMX20_00480 -0.9 -1.2 50S ribosomal protein L9 compare
MPMX20_03987 -0.9 -2.5 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase compare
MPMX20_04497 -0.9 -2.7 HTH-type transcriptional regulator GltC compare
MPMX20_00722 -0.9 -2.7 Na(+)/H(+) antiporter NhaA compare
MPMX20_02248 -0.9 -2.0 hypothetical protein compare
MPMX20_02147 -0.9 -2.4 2,3-dehydroadipyl-CoA hydratase compare
MPMX20_00849 -0.9 -3.2 hypothetical protein compare
MPMX20_00234 -0.9 -3.2 Transcriptional repressor IclR compare
MPMX20_02888 -0.9 -2.8 hypothetical protein compare
MPMX20_03364 -0.9 -0.9 hypothetical protein compare
MPMX20_01185 -0.9 -1.7 hypothetical protein compare
MPMX20_01888 -0.9 -2.5 hypothetical protein compare
MPMX20_04136 -0.9 -3.7 Cell division protein ZapE compare
MPMX20_02535 -0.9 -0.8 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_02695 -0.9 -2.5 Endo-type membrane-bound lytic murein transglycosylase A compare
MPMX20_03966 -0.9 -1.8 hypothetical protein compare
MPMX20_02325 -0.9 -2.9 hypothetical protein compare
MPMX20_01413 -0.9 -1.1 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_02861 -0.9 -3.9 hypothetical protein compare
MPMX20_01851 -0.9 -1.1 Putative NAD(P)H nitroreductase YdjA compare
MPMX20_01017 -0.9 -1.8 hypothetical protein compare
MPMX20_02696 -0.9 -2.8 Murein tetrapeptide carboxypeptidase compare
MPMX20_01414 -0.9 -2.7 Molybdopterin synthase catalytic subunit compare
MPMX20_00023 -0.9 -3.2 D-serine dehydratase compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 in Enterobacter sp. TBS_079

For mixed community 1X LB plate, 1:1 coculture with Sphingobium xenophagum Sin1 across organisms