Experiment set11S400 for Marinobacter adhaerens HP15

Compare to:

monoculture; Experiment C, time point 2

200 most detrimental genes:

  gene name fitness t score description  
HP15_3428 +1.9 10.8 response regulator receiver protein compare
HP15_2300 +1.6 5.1 chemotaxis phosphatase, CheZ compare
HP15_p42g17 +1.6 11.0 traN-like protein compare
HP15_607 +1.5 1.9 rare lipoprotein A family protein compare
HP15_3436 +1.5 1.6 hypothetical protein compare
HP15_2299 +1.4 3.9 hypothetical protein compare
HP15_2972 +1.4 1.9 cyclic nucleotide-binding protein compare
HP15_2130 +1.3 2.0 transcriptional regulator, TraR/DksA family compare
HP15_3427 +1.1 2.8 two-component response regulator compare
HP15_2569 +1.1 3.3 conserved hypothetical protein, membrane compare
HP15_1707 +1.1 2.4 short-chain dehydrogenase/reductase SDR compare
HP15_3108 +1.0 1.2 hypothetical protein compare
HP15_3430 +1.0 4.9 integral membrane sensor signal transduction histidine kinase compare
HP15_861 +1.0 1.2 cold shock, CspA compare
HP15_p187g79 +1.0 6.9 conserved hypothetical protein compare
HP15_1881 +1.0 2.3 YcgL domain protein compare
HP15_2183 +1.0 6.1 DNA-binding ATP-dependent protease La compare
HP15_144 +0.9 1.9 conserved hypothetical protein compare
HP15_1209 +0.8 2.6 glycosyltransferase involved in cell wall biogenesis compare
HP15_1467 +0.8 1.9 fFlagellar basal-body rod protein FlgB compare
HP15_3253 +0.8 2.0 ferritin-like DNA-binding protein compare
HP15_3628 +0.8 0.8 hypothetical protein compare
HP15_2327 +0.8 4.2 flagellar hook-basal body complex protein FliE compare
HP15_1244 +0.8 1.3 protein containing DUF1289 compare
HP15_3577 +0.8 1.4 hypothetical protein compare
HP15_590 +0.7 2.4 haloalkane dehalogenase compare
HP15_1087 +0.7 2.3 prophage CP4-57 regulatory compare
HP15_2401 +0.7 4.5 polysaccharide biosynthesis/export protein compare
HP15_911 +0.7 2.3 conserved hypothetical protein compare
HP15_3344 +0.7 4.2 phosphate transporter family protein compare
HP15_3238 +0.7 1.4 protein containing cystathionine beta-synthase, core domain compare
HP15_4010 +0.7 3.2 flagellar motor protein PomA compare
HP15_p42g15 +0.7 2.9 KfrA protein compare
HP15_2386 +0.7 4.4 UDP-glucose 4-epimerase compare
HP15_2461 +0.7 2.4 type IV pilus assembly PilZ compare
HP15_1936 +0.7 1.2 conserved hypothetical protein compare
HP15_1222 +0.7 1.0 conserved hypothetical protein, membrane compare
HP15_604 +0.7 1.5 conserved hypothetical protein CHP00246 compare
HP15_2292 +0.7 2.1 purine-binding chemotaxis protein CheW compare
HP15_2445 +0.7 2.5 protein yhbJ compare
HP15_2314 +0.7 4.1 flagellar motor switch protein FliN-like protein compare
HP15_p187g18 +0.7 4.4 hypothetical protein compare
HP15_1647 +0.7 1.5 DoxX compare
HP15_1678 +0.7 1.8 FMN reductase, NADPH-dependent compare
HP15_1659 +0.7 1.7 hypothetical protein compare
HP15_3309 +0.7 4.3 S-adenosylmethionine decarboxylase proenzyme compare
HP15_1627 +0.7 2.7 conserved hypothetical protein compare
HP15_1312 +0.7 2.2 2-dehydropantoate 2-reductase compare
HP15_2321 +0.6 1.2 anti-sigma-factor antagonist compare
HP15_1975 +0.6 2.8 conserved hypothetical protein compare
HP15_2658 +0.6 2.6 nucleoside-diphosphate-sugar epimerase compare
HP15_1297 +0.6 0.9 conserved hypothetical protein, secreted compare
HP15_89 +0.6 1.2 transcriptional regulator, MerR family protein compare
HP15_1126 +0.6 2.4 phosphoglycerate mutase compare
HP15_p42g9 +0.6 2.3 kleC-like protein compare
HP15_3520 +0.6 1.2 protein containing CheW-like domain compare
HP15_636 +0.6 1.8 GTP-binding protein, ribosome biogenesis, YlqF compare
HP15_2316 +0.6 2.1 flagellar basal body-associated protein FliL compare
HP15_3573 +0.6 1.2 hypothetical protein compare
HP15_1532 +0.6 0.7 transcriptional regulator, GntR family compare
HP15_p187g15 +0.6 2.0 serine phosphatase RsbU-like protein, regulator of sigma compare
HP15_1005 +0.6 2.0 acyl-CoA dehydrogenase domain protein compare
HP15_1252 +0.6 1.4 small component of pyruvate transporter (TIGR03647) (from data) compare
HP15_794 +0.6 2.2 conserved hypothetical protein compare
HP15_3308 +0.6 2.8 OsmC family protein compare
HP15_1086 +0.6 1.5 hypothetical protein compare
HP15_2073 +0.6 2.7 peptidyl-arginine deiminase family protein compare
HP15_1625 +0.6 2.5 3-oxoacyl-(acyl carrier protein) synthase III compare
HP15_p42g16 +0.6 0.6 conjugal transfer protein TraO compare
HP15_1909 +0.6 2.6 fibronectin, type III domain protein-like protein compare
HP15_421 +0.6 3.1 MSHA pilin protein MshD compare
HP15_335 +0.6 2.2 uncharacterized conserved protein UCP029688, pentapeptide compare
HP15_1734 +0.6 1.3 ABC-type multidrug transport system, ATPase component compare
HP15_3603 +0.6 2.8 transcriptional regulator, HxlR family compare
HP15_2472 +0.6 2.1 hypothetical protein compare
HP15_2239 +0.5 1.1 BLUF domain containing protein compare
HP15_3634 +0.5 1.0 hypothetical protein compare
HP15_2319 +0.5 2.1 Hpt domain protein compare
HP15_3325 +0.5 2.1 DSBA oxidoreductase compare
HP15_2244 +0.5 1.3 glycerophosphoryl diester phosphodiesterase compare
HP15_2005 +0.5 1.1 hypothetical protein compare
HP15_1639 +0.5 1.1 MarR family transcriptional regulator-like protein compare
HP15_261 +0.5 0.7 hypothetical protein compare
HP15_490 +0.5 1.8 hypothetical protein compare
HP15_2325 +0.5 2.5 flagellar motor switch protein G compare
HP15_623 +0.5 1.9 RNA methyltransferase, TrmH family, group 3 compare
HP15_536 +0.5 1.1 ferric reductase domain protein protein transmembrane component, N-terminal domain protein compare
HP15_481 +0.5 3.4 sporulation domain protein compare
HP15_1660 +0.5 1.7 hypothetical protein compare
HP15_212 +0.5 0.7 hypothetical protein compare
HP15_1461 +0.5 1.0 ATP-binding component of ABC transporter compare
HP15_1695 +0.5 1.3 protein containing zinc finger, DksA/TraR C4-type domain compare
HP15_3531 +0.5 1.2 hypothetical protein compare
HP15_3277 +0.5 1.4 diadenosine tetraphosphatase compare
HP15_272 +0.5 2.4 biosynthetic arginine decarboxylase compare
HP15_p187g154 +0.5 1.6 hypothetical protein compare
HP15_1829 +0.5 1.4 tRNA pseudouridine synthase A compare
HP15_1102 +0.5 3.5 integrase catalytic region compare
HP15_3530 +0.5 2.5 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase compare
HP15_938 +0.5 2.0 spermidine/putrescine ABC transporter, permease protein compare
HP15_1891 +0.5 2.5 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_231 +0.5 0.7 thiamineS compare
HP15_3021 +0.5 0.9 glycolate oxidase iron-sulfur subunit compare
HP15_78 +0.5 1.6 hypothetical protein compare
HP15_3885 +0.5 1.6 formate and nitrite transporter compare
HP15_128 +0.5 1.8 conserved hypothetical protein compare
HP15_4041 +0.5 2.4 OmpA/MotB domain protein compare
HP15_3927 +0.5 2.1 protein containing helix-turn-helix type 3 domain compare
HP15_1468 +0.5 1.7 flagellar basal-body rod protein FlgC-like protein compare
HP15_2844 +0.5 1.4 hypothetical protein compare
HP15_2297 +0.5 2.2 response regulator receiver modulated CheB methylesterase compare
HP15_3836 +0.5 0.9 hypothetical protein compare
HP15_292 +0.5 2.3 conserved hypothetical protein compare
HP15_2641 +0.5 1.5 conserved hypothetical protein compare
HP15_2181 +0.5 2.3 PpiC-type peptidyl-prolyl cis-trans isomerase compare
HP15_1767 +0.5 2.6 hypothetical protein compare
HP15_2368 +0.5 2.1 flagellar protein FliS compare
HP15_3369 +0.5 3.0 glutathione S-transferase-like protein compare
HP15_1340 +0.5 1.8 GCN5-related N-acetyltransferase compare
HP15_3107 +0.4 0.7 hypothetical protein compare
HP15_1554 +0.4 1.7 hydrolase, isochorismatase family compare
HP15_514 +0.4 0.5 peptidylprolyl isomerase, FKBP-type compare
HP15_1878 +0.4 2.7 von Willebrand factor, type A compare
HP15_1886 +0.4 2.0 oxidoreductase, 2OG-Fe(II) oxygenase family protein compare
HP15_1432 +0.4 1.5 conserved hypothetical protein, membrane compare
HP15_p187g12 +0.4 2.6 tetratricopeptide TPR_2 repeat protein-like protein compare
HP15_1259 +0.4 1.7 xanthine dehydrogenase accessory factor compare
HP15_2301 +0.4 2.3 response regulator receiver domain protein (CheY-) compare
HP15_412 +0.4 1.3 conserved hypothetical protein, secreted compare
HP15_1735 +0.4 1.0 ABC transporter, permease protein compare
HP15_1154 +0.4 1.6 glyoxalase/bleomycin resistance protein/dioxygenase compare
HP15_3365 +0.4 3.4 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase compare
HP15_1774 +0.4 1.1 conserved hypothetical protein, membrane compare
HP15_1490 +0.4 1.1 conserved hypothetical protein compare
HP15_3270 +0.4 1.9 OmpA/MotB domain protein compare
HP15_954 +0.4 0.8 peptidoglycan-associated cytoplasmic membrane protein compare
HP15_4176 +0.4 1.5 electron-transferring-flavoprotein dehydrogenase compare
HP15_p42g50 +0.4 1.0 conjugal transfer protein TrbD-like protein compare
HP15_3858 +0.4 2.0 aspartate kinase compare
HP15_652 +0.4 0.9 conserved hypothetical protein compare
HP15_4024 +0.4 1.1 phenol hydroxylase subunit compare
HP15_3023 +0.4 2.4 glycolate oxidase FAD binding subunit compare
HP15_2364 +0.4 1.3 nucleotide-binding protein compare
HP15_1263 +0.4 2.0 conserved hypothetical protein compare
HP15_2072 +0.4 1.2 conserved hypothetical protein, secreted compare
HP15_1447 +0.4 2.2 ribonucleotide-diphosphate reductase subunit alpha compare
HP15_830 +0.4 1.5 conserved hypothetical protein compare
HP15_573 +0.4 1.0 hypothetical protein compare
HP15_157 +0.4 2.0 conserved hypothetical protein compare
HP15_4107 +0.4 1.9 endonuclease 8 compare
HP15_3640 +0.4 2.1 conserved hypothetical protein, RES superfamily compare
HP15_2315 +0.4 2.9 flagellar motor switch protein FliM-like protein compare
HP15_3859 +0.4 1.1 conserved hypothetical protein compare
HP15_3256 +0.4 0.3 phospho-2-dehydro-3-heoxyheptonate aldolase compare
HP15_1220 +0.4 2.8 acetyltransferase, GNAT family compare
HP15_2460 +0.4 0.5 hypothetical protein compare
HP15_1337 +0.4 0.7 conserved hypothetical protein, membrane compare
HP15_330 +0.4 1.4 conserved hypothetical protein, membrane compare
HP15_3752 +0.4 1.5 flagellar motor protein MotB compare
HP15_3254 +0.4 1.7 hypothetical protein compare
HP15_3629 +0.4 0.7 conserved hypothetical protein compare
HP15_2077 +0.4 1.4 leucyl/phenylalanyl-tRNA-protein transferase compare
HP15_4154 +0.4 2.6 glycosyl transferase family protein compare
HP15_1440 +0.4 1.1 cell division protein ZipA compare
HP15_2305 +0.4 3.6 flagellar biosynthesis protein A compare
HP15_3324 +0.4 2.0 endonuclease/exonuclease/phosphatase compare
HP15_1250 +0.4 1.3 conserved hypothetical protein, membrane compare
HP15_3903 +0.4 1.6 methionine import ATP-binding protein MetN 2 compare
HP15_2757 +0.4 0.9 conserved hypothetical protein compare
HP15_2015 +0.4 1.5 inner-membrane translocator compare
HP15_1725 +0.4 1.9 conserved hypothetical protein compare
HP15_p187g175 +0.4 2.2 conserved hypothetical protein compare
HP15_3055 +0.4 3.2 high-affinity leucine-specific leucine-specific-binding periplasmic protein of high-affinity branched-chain amino acid ABC transporter transport system periplasmic binding protein compare
HP15_1566 +0.4 1.8 conserved hypothetical protein compare
HP15_3585 +0.4 0.9 hypothetical protein compare
HP15_1409 +0.4 0.6 protein containing DUF1289 compare
HP15_2898 +0.4 1.8 secreted protein containing DUF481 compare
HP15_2634 +0.4 1.1 lipoprotein compare
HP15_1421 +0.4 1.9 ABC transporter, membrane spanning protein compare
HP15_639 +0.4 2.2 methyl-accepting chemotaxis sensory transducer compare
HP15_2136 +0.4 0.9 biopolymer transport protein ExbD/TolR compare
HP15_342 +0.4 1.2 RNA polymerase sigma factor SigE compare
HP15_1329 +0.4 2.2 DEAD/DEAH box helicase domain protein compare
HP15_2326 +0.4 2.2 flagellar MS-ring protein compare
HP15_264 +0.4 2.2 NADPH:quinone reductase and related Zn-dependent oxidoreductase compare
HP15_3092 +0.4 2.3 conserved hypothetical protein compare
HP15_152 +0.4 1.3 conserved hypothetical protein compare
HP15_2330 +0.4 3.1 two component, sigma54 specific, transcriptional regulator, Fis family compare
HP15_841 +0.4 1.3 YaiI/YqxD-like protein compare
HP15_2815 +0.4 1.1 conserved hypothetical protein, membrane compare
HP15_195 +0.4 0.3 hypothetical protein compare
HP15_915 +0.4 1.4 secreted protein containing sulphatase-modifying factor domain compare
HP15_1255 +0.4 1.7 protein containing Smr protein/MutS2 C-terminal domain compare
HP15_2786 +0.4 2.2 conserved hypothetical protein, secreted compare
HP15_1543 +0.4 1.3 type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB compare
HP15_1471 +0.4 2.5 flagellar basal-body rod FlgF compare
HP15_2748 +0.4 1.8 transcriptional regulator, LysR family protein compare
HP15_1793 +0.4 0.4 conserved hypothetical protein compare
HP15_972 +0.4 1.0 hypothetical protein compare
HP15_2509 +0.4 0.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Marinobacter adhaerens HP15 in pro99_seawater experiments