Experiment set11S391 for Marinobacter adhaerens HP15

Compare to:

monoculture; Experiment A, time point 7

Group: pro99_seawater
Media: Pro99_seawater
Culturing: Marino_ML2_MIT, bottle_100mL, Aerobic, at 24 (C), shaken=0 rpm
By: Christine Ziegler on 12/1/2024
Media components: 50 uM Sodium phosphate monobasic monohydrate, 800 uM Ammonium chloride, 1.17 uM EDTA (disodium salt), 1.18 uM Ferric chloride, 0.008 uM Zinc sulfate heptahydrate, 0.005 uM Cobalt chloride hexahydrate, 0.09 uM Manganese (II) chloride tetrahydrate, 0.003 uM Sodium Molybdate Dihydrate, 0.01 uM Sodium selenite pentahydrate, 0.01 uM Nickel (II) chloride hexahydrate, 1 X Filtered Seawater

Specific Phenotypes

For 37 genes in this experiment

SEED Subsystems

Subsystem #Specific
Widespread colonization island 3
Ammonia assimilation 2
Flagellar motility 2
Flagellum 2
DNA-replication 1
Fructooligosaccharides(FOS) and Raffinose Utilization 1
N-linked Glycosylation in Bacteria 1
SigmaB stress responce regulation 1
Sucrose utilization 1
Sucrose utilization Shewanella 1
Transcription initiation, bacterial sigma factors 1
Transport of Zinc 1
cAMP signaling in bacteria 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
phosphatidylcholine biosynthesis V 3 1 1
sucrose degradation IV (sucrose phosphorylase) 4 3 1