Experiment set11S288 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS06120 -7.3 -1.6 UPF0147 family protein compare
MMP_RS06625 -6.1 -1.8 DNA primase compare
MMP_RS03315 -6.0 -1.1 ferrous iron transport protein A compare
MMP_RS08300 -5.8 -1.1 metal-sulfur cluster assembly factor compare
MMP_RS09055 -5.8 -0.9 CAP domain-containing protein compare
MMP_RS00300 -5.7 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS06400 -5.5 -1.4 4Fe-4S binding protein compare
MMP_RS03435 -5.5 -1.6 ketol-acid reductoisomerase compare
MMP_RS01500 -5.1 -1.6 CBS domain-containing protein compare
MMP_RS00515 -5.0 -0.8 DUF655 domain-containing protein compare
MMP_RS07600 -4.8 -2.1 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS07845 -4.3 -2.4 LL-diaminopimelate aminotransferase compare
MMP_RS01175 -4.3 -3.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07635 -4.0 -6.6 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06295 -3.8 -6.8 methanogenesis marker 14 protein compare
MMP_RS04775 -3.7 -2.5 adenosylhomocysteinase compare
MMP_RS01700 -3.7 -0.8 dihydroxy-acid dehydratase compare
MMP_RS07380 -3.7 -1.9 transcription elongation factor Spt5 compare
MMP_RS01020 -3.4 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS07730 -3.4 -1.8 pyruvate synthase subunit beta compare
MMP_RS08635 -3.3 -1.6 UbiA family prenyltransferase compare
MMP_RS05845 -3.2 -1.5 tRNA-intron lyase compare
MMP_RS07555 -3.2 -0.7 monovalent cation/H+ antiporter subunit E compare
MMP_RS01610 -3.1 -2.7 hypothetical protein compare
MMP_RS05550 -3.1 -0.7 cation:proton antiporter compare
MMP_RS08675 -3.1 -2.5 class III signal peptide-containing protein compare
MMP_RS01755 -3.1 -1.0 DUF2097 domain-containing protein compare
MMP_RS03445 -3.1 -0.9 methanogenesis marker 17 protein compare
MMP_RS06630 -3.0 -0.8 UPF0058 family protein compare
MMP_RS06350 -2.9 -6.8 HesA/MoeB/ThiF family protein compare
MMP_RS08720 -2.9 -1.4 4Fe-4S binding protein compare
MMP_RS02240 -2.9 -2.5 methanogenesis marker 7 protein compare
MMP_RS01265 -2.9 -2.2 hypothetical protein compare
MMP_RS04685 -2.8 -2.5 DUF126 domain-containing protein compare
MMP_RS08820 -2.6 -4.0 hypothetical protein compare
MMP_RS06725 -2.6 -7.3 hypothetical protein compare
MMP_RS02800 -2.6 -6.1 nucleotidyltransferase domain-containing protein compare
MMP_RS03960 -2.5 -0.9 hypothetical protein compare
MMP_RS06730 -2.5 -1.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS02900 -2.5 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS05515 -2.5 -7.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05555 -2.5 -1.4 DUF4040 domain-containing protein compare
MMP_RS02195 -2.5 -2.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS08435 -2.5 -1.7 Era-like GTP-binding protein compare
MMP_RS08595 -2.4 -1.0 flagellar protein C compare
MMP_RS04780 -2.4 -2.2 ribonuclease P compare
MMP_RS05425 -2.4 -3.8 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS06340 -2.4 -5.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS01310 -2.4 -12.6 hypothetical protein compare
MMP_RS03035 -2.4 -2.7 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS03700 -2.4 -4.7 sodium:proton antiporter compare
MMP_RS08650 -2.3 -2.5 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06895 -2.3 -1.1 selenocysteine-specific translation elongation factor compare
MMP_RS01005 -2.3 -1.1 riboflavin synthase compare
MMP_RS00810 -2.3 -7.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS09020 -2.3 -1.3 hypothetical protein compare
MMP_RS04720 -2.3 -2.1 DedA family protein compare
MMP_RS07330 -2.3 -14.0 membrane protein compare
MMP_RS04900 -2.3 -13.9 hypothetical protein compare
MMP_RS01225 -2.3 -3.0 DUF5379 domain-containing protein compare
MMP_RS07075 -2.3 -2.3 phosphomannomutase/phosphoglucomutase compare
MMP_RS06035 -2.3 -8.9 glycosyltransferase family 2 protein compare
MMP_RS01365 -2.3 -2.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS01305 -2.2 -14.9 hypothetical protein compare
MMP_RS01545 -2.2 -0.9 CBS domain-containing protein compare
MMP_RS07355 -2.2 -0.8 transcription factor S compare
MMP_RS01270 -2.2 -14.4 prepilin peptidase compare
MMP_RS06355 -2.2 -2.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS00240 -2.2 -11.7 type II secretion system F family protein compare
MMP_RS06980 -2.2 -6.2 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS06475 -2.2 -3.1 FAD-dependent oxidoreductase compare
MMP_RS08745 -2.2 -4.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00245 -2.2 -15.2 type II secretion system F family protein compare
MMP_RS01960 -2.2 -0.7 hypothetical protein compare
MMP_RS00730 -2.2 -4.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS03475 -2.2 -0.5 hypothetical protein compare
MMP_RS01290 -2.2 -9.0 class III signal peptide-containing protein compare
MMP_RS05635 -2.1 -9.1 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS05345 -2.1 -4.1 hypothetical protein compare
MMP_RS03580 -2.1 -2.4 signal recognition particle-docking protein FtsY compare
MMP_RS00250 -2.1 -13.0 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01280 -2.1 -12.3 DUF515 domain-containing protein compare
MMP_RS02930 -2.1 -2.5 class I SAM-dependent methyltransferase compare
MMP_RS01285 -2.1 -7.8 hypothetical protein compare
MMP_RS00115 -2.0 -9.0 radical SAM protein compare
MMP_RS03025 -2.0 -4.1 molybdenum cofactor guanylyltransferase compare
MMP_RS01380 -2.0 -3.3 PHP domain-containing protein compare
MMP_RS03015 -2.0 -6.4 GTP 3' 8-cyclase MoaA compare
MMP_RS06395 -2.0 -2.1 ThiF family adenylyltransferase compare
MMP_RS02235 -2.0 -6.8 CBS domain-containing protein compare
MMP_RS08210 -2.0 -1.3 phosphatidylglycerophosphatase A compare
MMP_RS04710 -2.0 -1.3 hypothetical protein compare
MMP_RS00320 -1.9 -1.2 class I SAM-dependent methyltransferase compare
MMP_RS00040 -1.9 -4.5 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS05580 -1.9 -11.1 glycosyltransferase compare
MMP_RS07755 -1.9 -0.8 DUF555 domain-containing protein compare
MMP_RS01220 -1.9 -5.3 hypothetical protein compare
MMP_RS06925 -1.9 -1.9 ribonuclease VapC4 compare
MMP_RS07750 -1.9 -3.2 DUF357 domain-containing protein compare
MMP_RS06315 -1.9 -0.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08855 -1.9 -6.1 hypothetical protein compare
MMP_RS01720 -1.9 -1.6 replication factor C large subunit compare
MMP_RS08860 -1.9 -5.7 MinD/ParA family protein compare
MMP_RS02145 -1.9 -5.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS07200 -1.9 -4.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS01315 -1.8 -13.0 DUF2341 domain-containing protein compare
MMP_RS03110 -1.8 -4.0 glycosyltransferase family 2 protein compare
MMP_RS07605 -1.8 -2.9 diadenylate cyclase compare
MMP_RS07525 -1.8 -4.9 4Fe-4S binding protein compare
MMP_RS02345 -1.8 -1.6 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS00735 -1.8 -2.9 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS01795 -1.8 -1.1 methanogenesis marker 6 protein compare
MMP_RS01925 -1.8 -5.6 DUF1616 domain-containing protein compare
MMP_RS05245 -1.8 -7.2 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS01295 -1.8 -7.3 hypothetical protein compare
MMP_RS00985 -1.8 -3.0 CDC48 family AAA ATPase compare
MMP_RS00750 -1.8 -1.7 fumarate hydratase compare
MMP_RS00725 -1.7 -3.8 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS00110 -1.7 -2.2 hypothetical protein compare
MMP_RS01665 -1.7 -3.0 DUF2111 domain-containing protein compare
MMP_RS03250 -1.7 -2.2 MJ1244 family protein compare
MMP_RS03600 -1.7 -1.7 triose-phosphate isomerase compare
MMP_RS01085 -1.7 -1.6 hypothetical protein compare
MMP_RS08440 -1.7 -1.9 cell division protein SepF compare
MMP_RS04890 -1.7 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS07710 -1.7 -4.9 cell division protein FtsZ compare
MMP_RS05540 -1.7 -2.6 hypothetical protein compare
MMP_RS06485 -1.7 -0.7 zinc ribbon domain-containing protein compare
MMP_RS02470 -1.7 -1.1 helix-turn-helix transcriptional regulator compare
MMP_RS06285 -1.7 -1.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01900 -1.7 -8.1 hypothetical protein compare
MMP_RS07695 -1.7 -4.0 DUF3236 domain-containing protein compare
MMP_RS05925 -1.7 -2.4 small nuclear ribonucleoprotein compare
MMP_RS00315 -1.6 -4.2 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01275 -1.6 -4.7 class III signal peptide-containing protein compare
MMP_RS08790 -1.6 -1.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS06885 -1.6 -1.6 50S ribosome-binding GTPase compare
MMP_RS03400 -1.6 -1.4 archease compare
MMP_RS01660 -1.6 -2.4 hypothetical protein compare
MMP_RS00895 -1.6 -2.1 hypothetical protein compare
MMP_RS01800 -1.6 -3.2 TIGR00303 family protein compare
MMP_RS03385 -1.5 -0.8 cation diffusion facilitator family transporter compare
MMP_RS01875 -1.5 -4.9 N-acetyltransferase compare
MMP_RS04850 -1.5 -8.3 UPF0254 family protein compare
MMP_RS00685 -1.5 -2.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07390 -1.5 -1.2 cell division protein FtsZ compare
MMP_RS01890 -1.5 -2.4 nucleotide sugar dehydrogenase compare
MMP_RS01725 -1.5 -2.3 class I SAM-dependent methyltransferase family protein compare
MMP_RS01895 -1.5 -6.9 flippase compare
MMP_RS09045 -1.4 -7.6 class III signal peptide-containing protein compare
MMP_RS06105 -1.4 -5.5 hydrogenase maturation peptidase HycI compare
MMP_RS03140 -1.4 -6.5 hypothetical protein compare
MMP_RS02340 -1.4 -0.9 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01745 -1.4 -3.1 AMP phosphorylase compare
MMP_RS03095 -1.4 -2.8 diphthine synthase compare
MMP_RS04585 -1.4 -5.3 AIR synthase related protein compare
MMP_RS03390 -1.4 -4.5 malate dehydrogenase compare
MMP_RS03155 -1.4 -5.9 precorrin-6A reductase compare
MMP_RS06670 -1.4 -2.7 glucose-6-phosphate isomerase compare
MMP_RS07820 -1.4 -2.6 UPF0104 family protein compare
MMP_RS08645 -1.4 -3.1 UPF0179 family protein compare
MMP_RS08195 -1.4 -4.5 hypothetical protein compare
MMP_RS02355 -1.4 -1.4 30S ribosomal protein S27ae compare
MMP_RS03080 -1.4 -1.1 universal stress protein compare
MMP_RS09025 -1.4 -0.8 hypothetical protein compare
MMP_RS03125 -1.3 -3.6 cell division ATPase MinD compare
MMP_RS03640 -1.3 -1.8 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS05460 -1.3 -4.6 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS06215 -1.3 -1.7 30S ribosomal protein S6e compare
MMP_RS04485 -1.3 -7.8 putative beta-lysine N-acetyltransferase compare
MMP_RS01195 -1.3 -0.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06270 -1.3 -2.4 TIGR00300 family protein compare
MMP_RS08940 -1.3 -1.0 MetS family NSS transporter small subunit compare
MMP_RS08165 -1.3 -1.2 phosphoglycerate dehydrogenase compare
MMP_RS08350 -1.3 -0.5 hypothetical protein compare
MMP_RS07955 -1.3 -3.4 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS02175 -1.3 -0.5 DUF1611 domain-containing protein compare
MMP_RS07425 -1.3 -3.5 GTP-binding protein compare
MMP_RS08715 -1.2 -0.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08330 -1.2 -3.5 NADH-quinone oxidoreductase subunit H compare
MMP_RS04090 -1.2 -1.4 hypothetical protein compare
MMP_RS06900 -1.2 -1.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS07420 -1.2 -2.3 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07875 -1.2 -2.9 hypothetical protein compare
MMP_RS07625 -1.2 -2.0 cobalt ECF transporter T component CbiQ compare
MMP_RS01905 -1.2 -5.5 glycosyltransferase compare
MMP_RS00915 -1.2 -3.4 DUF116 domain-containing protein compare
MMP_RS06230 -1.2 -1.3 helix-turn-helix domain-containing protein compare
MMP_RS03020 -1.2 -3.8 peptidylprolyl isomerase compare
MMP_RS02245 -1.2 -1.6 hypothetical protein compare
MMP_RS00125 -1.2 -0.9 DUF2798 domain-containing protein compare
MMP_RS07350 -1.2 -1.3 preprotein translocase subunit Sec61beta compare
MMP_RS01100 -1.2 -1.0 ABC transporter ATP-binding protein compare
MMP_RS07615 -1.2 -3.2 energy-coupling factor ABC transporter permease compare
MMP_RS01865 -1.2 -0.9 GPR1/FUN34/YaaH family transporter compare
MMP_RS05930 -1.1 -1.3 3-isopropylmalate dehydratase large subunit compare
MMP_RS07005 -1.1 -0.4 4Fe-4S binding protein compare
MMP_RS06110 -1.1 -1.6 ATP-dependent protease LonB compare
MMP_RS03070 -1.1 -2.3 AzlD domain-containing protein compare
MMP_RS02010 -1.1 -3.1 PHP domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments