Experiment set11S270 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete sodium bromide 250 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS05555 -5.1 -1.4 DUF4040 domain-containing protein compare
MMP_RS08790 -5.0 -1.9 translation initiation factor IF-2 subunit alpha compare
MMP_RS05550 -5.0 -1.0 cation:proton antiporter compare
MMP_RS02175 -4.8 -0.9 DUF1611 domain-containing protein compare
MMP_RS06600 -4.3 -1.2 class III signal peptide-containing protein compare
MMP_RS04090 -4.2 -2.4 hypothetical protein compare
MMP_RS08440 -4.1 -2.4 cell division protein SepF compare
MMP_RS01385 -3.9 -0.7 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS01085 -3.8 -1.5 hypothetical protein compare
MMP_RS07380 -3.8 -2.1 transcription elongation factor Spt5 compare
MMP_RS00520 -3.8 -1.7 RNA polymerase Rpb4 family protein compare
MMP_RS01700 -3.6 -1.0 dihydroxy-acid dehydratase compare
MMP_RS01960 -3.5 -0.9 hypothetical protein compare
MMP_RS06630 -3.4 -0.9 UPF0058 family protein compare
MMP_RS03385 -3.3 -0.9 cation diffusion facilitator family transporter compare
MMP_RS03960 -3.2 -0.9 hypothetical protein compare
MMP_RS01365 -3.1 -2.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS07605 -3.1 -2.1 diadenylate cyclase compare
MMP_RS04710 -3.0 -1.5 hypothetical protein compare
MMP_RS01755 -2.9 -1.0 DUF2097 domain-containing protein compare
MMP_RS07730 -2.8 -1.7 pyruvate synthase subunit beta compare
MMP_RS00040 -2.8 -4.4 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS06485 -2.8 -0.8 zinc ribbon domain-containing protein compare
MMP_RS07755 -2.7 -1.0 DUF555 domain-containing protein compare
MMP_RS01265 -2.7 -2.7 hypothetical protein compare
MMP_RS03640 -2.7 -2.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04955 -2.7 -4.9 DNA topoisomerase I compare
MMP_RS03435 -2.6 -1.6 ketol-acid reductoisomerase compare
MMP_RS00325 -2.6 -1.1 RNA-binding protein compare
MMP_RS08675 -2.4 -2.4 class III signal peptide-containing protein compare
MMP_RS06315 -2.4 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS06895 -2.4 -1.1 selenocysteine-specific translation elongation factor compare
MMP_RS08745 -2.4 -4.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04480 -2.3 -11.4 lysine 2 3-aminomutase compare
MMP_RS08720 -2.3 -1.3 4Fe-4S binding protein compare
MMP_RS07545 -2.3 -0.9 HTH domain-containing protein compare
MMP_RS05925 -2.3 -1.6 small nuclear ribonucleoprotein compare
MMP_RS08995 -2.3 -1.0 hypothetical protein compare
MMP_RS06120 -2.2 -1.3 UPF0147 family protein compare
MMP_RS08300 -2.2 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS00895 -2.2 -1.9 hypothetical protein compare
MMP_RS06975 -2.1 -1.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07750 -2.1 -2.9 DUF357 domain-containing protein compare
MMP_RS06885 -2.1 -2.0 50S ribosome-binding GTPase compare
MMP_RS04485 -2.1 -8.8 putative beta-lysine N-acetyltransferase compare
MMP_RS03445 -2.1 -0.7 methanogenesis marker 17 protein compare
MMP_RS06730 -2.1 -1.0 phosphopantothenate/pantothenate synthetase compare
MMP_RS01195 -2.1 -1.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01610 -2.0 -1.7 hypothetical protein compare
MMP_RS07845 -2.0 -2.2 LL-diaminopimelate aminotransferase compare
MMP_RS00300 -2.0 -0.5 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08820 -1.9 -2.2 hypothetical protein compare
MMP_RS02800 -1.9 -4.8 nucleotidyltransferase domain-containing protein compare
MMP_RS06130 -1.9 -2.4 peptidylprolyl isomerase compare
MMP_RS01800 -1.9 -2.7 TIGR00303 family protein compare
MMP_RS00985 -1.9 -3.2 CDC48 family AAA ATPase compare
MMP_RS01225 -1.9 -2.6 DUF5379 domain-containing protein compare
MMP_RS08195 -1.8 -5.5 hypothetical protein compare
MMP_RS02340 -1.8 -1.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS06350 -1.8 -2.7 HesA/MoeB/ThiF family protein compare
MMP_RS01725 -1.8 -2.6 class I SAM-dependent methyltransferase family protein compare
MMP_RS07635 -1.8 -3.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS00685 -1.8 -2.2 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01270 -1.7 -7.8 prepilin peptidase compare
MMP_RS06355 -1.7 -1.5 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS06340 -1.7 -3.6 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02240 -1.7 -1.1 methanogenesis marker 7 protein compare
MMP_RS04615 -1.7 -2.3 PDGLE domain-containing protein compare
MMP_RS06295 -1.6 -2.9 methanogenesis marker 14 protein compare
MMP_RS06400 -1.6 -0.9 4Fe-4S binding protein compare
MMP_RS07005 -1.6 -0.4 4Fe-4S binding protein compare
MMP_RS03035 -1.6 -2.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06285 -1.6 -1.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00915 -1.6 -2.8 DUF116 domain-containing protein compare
MMP_RS06020 -1.5 -2.4 archaeoflavoprotein AfpA compare
MMP_RS00110 -1.5 -1.5 hypothetical protein compare
MMP_RS02235 -1.5 -5.0 CBS domain-containing protein compare
MMP_RS00245 -1.5 -9.0 type II secretion system F family protein compare
MMP_RS03700 -1.5 -3.5 sodium:proton antiporter compare
MMP_RS03400 -1.5 -1.2 archease compare
MMP_RS05345 -1.5 -3.2 hypothetical protein compare
MMP_RS01290 -1.5 -5.8 class III signal peptide-containing protein compare
MMP_RS03025 -1.5 -2.1 molybdenum cofactor guanylyltransferase compare
MMP_RS01305 -1.4 -8.3 hypothetical protein compare
MMP_RS05920 -1.4 -0.4 50S ribosomal protein L37e compare
MMP_RS05245 -1.4 -4.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS00250 -1.4 -7.5 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01280 -1.4 -7.1 DUF515 domain-containing protein compare
MMP_RS03600 -1.4 -1.1 triose-phosphate isomerase compare
MMP_RS05910 -1.4 -1.4 cell division ATPase MinD compare
MMP_RS04900 -1.4 -8.5 hypothetical protein compare
MMP_RS00240 -1.4 -6.4 type II secretion system F family protein compare
MMP_RS06475 -1.4 -1.8 FAD-dependent oxidoreductase compare
MMP_RS02145 -1.4 -3.8 winged helix-turn-helix transcriptional regulator compare
MMP_RS01310 -1.4 -7.5 hypothetical protein compare
MMP_RS04790 -1.4 -5.0 4-hydroxy-tetrahydrodipicolinate reductase compare
MMP_RS01315 -1.4 -9.4 DUF2341 domain-containing protein compare
MMP_RS01335 -1.4 -1.0 prefoldin subunit beta compare
MMP_RS01500 -1.3 -0.9 CBS domain-containing protein compare
MMP_RS00810 -1.3 -2.5 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS02930 -1.3 -1.4 class I SAM-dependent methyltransferase compare
MMP_RS06395 -1.3 -1.2 ThiF family adenylyltransferase compare
MMP_RS08860 -1.3 -2.0 MinD/ParA family protein compare
MMP_RS03485 -1.3 -2.1 TIGR00267 family protein compare
MMP_RS05265 -1.3 -1.2 2-isopropylmalate synthase compare
MMP_RS03580 -1.3 -1.8 signal recognition particle-docking protein FtsY compare
MMP_RS06925 -1.3 -1.4 ribonuclease VapC4 compare
MMP_RS03250 -1.3 -2.0 MJ1244 family protein compare
MMP_RS01575 -1.3 -3.5 aldolase compare
MMP_RS08715 -1.3 -0.8 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08645 -1.3 -3.3 UPF0179 family protein compare
MMP_RS04585 -1.3 -3.1 AIR synthase related protein compare
MMP_RS03125 -1.2 -2.1 cell division ATPase MinD compare
MMP_RS01285 -1.2 -5.8 hypothetical protein compare
MMP_RS07600 -1.2 -0.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08940 -1.2 -0.8 MetS family NSS transporter small subunit compare
MMP_RS01830 -1.2 -0.4 tRNA-Val compare
MMP_RS01295 -1.1 -4.7 hypothetical protein compare
MMP_RS01275 -1.1 -3.4 class III signal peptide-containing protein compare
MMP_RS08280 -1.1 -0.9 proteasome assembly chaperone family protein compare
MMP_RS01545 -1.1 -0.5 CBS domain-containing protein compare
MMP_RS07695 -1.1 -2.9 DUF3236 domain-containing protein compare
MMP_RS00140 -1.1 -2.1 DUF192 domain-containing protein compare
MMP_RS02355 -1.1 -1.3 30S ribosomal protein S27ae compare
MMP_RS01100 -1.0 -0.7 ABC transporter ATP-binding protein compare
MMP_RS01380 -1.0 -1.9 PHP domain-containing protein compare
MMP_RS08400 -1.0 -1.6 MJ0307 family thioredoxin compare
MMP_RS00125 -1.0 -0.7 DUF2798 domain-containing protein compare
MMP_RS08855 -1.0 -2.9 hypothetical protein compare
MMP_RS01140 -1.0 -1.9 molybdate ABC transporter permease subunit compare
MMP_RS08760 -1.0 -0.9 hypothetical protein compare
MMP_RS06525 -1.0 -0.5 YciI family protein compare
MMP_RS06585 -1.0 -0.7 DMT family protein compare
MMP_RS06865 -1.0 -1.2 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS05765 -1.0 -2.1 M42 family metallopeptidase compare
MMP_RS06110 -1.0 -1.5 ATP-dependent protease LonB compare
MMP_RS05295 -1.0 -3.5 minichromosome maintenance protein MCM compare
MMP_RS06670 -1.0 -1.9 glucose-6-phosphate isomerase compare
MMP_RS00150 -1.0 -3.3 AAA family ATPase compare
MMP_RS06980 -1.0 -2.7 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS06940 -1.0 -1.3 polyprenyl diphosphate synthase compare
MMP_RS08165 -1.0 -1.1 phosphoglycerate dehydrogenase compare
MMP_RS02545 -1.0 -1.8 hypothetical protein compare
MMP_RS03095 -1.0 -1.7 diphthine synthase compare
MMP_RS04420 -0.9 -2.1 LysE family translocator compare
MMP_RS03450 -0.9 -0.8 glycine synthesis protein GlyXS (from data) compare
MMP_RS06720 -0.9 -3.3 response regulator transcription factor compare
MMP_RS04785 -0.9 -4.5 hypothetical protein compare
MMP_RS00305 -0.9 -0.8 phosphoribosyl-ATP diphosphatase compare
MMP_RS07200 -0.9 -1.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00115 -0.9 -3.4 radical SAM protein compare
MMP_RS03205 -0.9 -0.5 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS07420 -0.9 -1.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS04360 -0.9 -1.4 hypothetical protein compare
MMP_RS02280 -0.9 -0.3 DUF211 domain-containing protein compare
MMP_RS05250 -0.9 -1.3 NFYB/HAP3 family transcription factor subunit compare
MMP_RS03305 -0.9 -2.2 winged helix-turn-helix domain-containing protein compare
MMP_RS02470 -0.9 -0.6 helix-turn-helix transcriptional regulator compare
MMP_RS06365 -0.9 -0.9 hypothetical protein compare
MMP_RS02490 -0.9 -1.4 hypothetical protein compare
MMP_RS07355 -0.9 -0.4 transcription factor S compare
MMP_RS00695 -0.9 -0.3 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06935 -0.9 -2.3 protease complex subunit PrcB family protein compare
MMP_RS03015 -0.8 -2.8 GTP 3' 8-cyclase MoaA compare
MMP_RS03020 -0.8 -1.6 peptidylprolyl isomerase compare
MMP_RS03210 -0.8 -4.2 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS04775 -0.8 -1.1 adenosylhomocysteinase compare
MMP_RS05965 -0.8 -1.7 carboxymuconolactone decarboxylase family protein compare
MMP_RS05540 -0.8 -1.3 hypothetical protein compare
MMP_RS00880 -0.8 -1.7 ribosome assembly RNA-binding protein YhbY compare
MMP_RS02675 -0.8 -0.9 hypothetical protein compare
MMP_RS01005 -0.8 -0.6 riboflavin synthase compare
MMP_RS03765 -0.8 -2.1 CopG family ribbon-helix-helix protein compare
MMP_RS05515 -0.8 -2.7 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS02110 -0.8 -0.7 hypothetical protein compare
MMP_RS09055 -0.8 -0.4 CAP domain-containing protein compare
MMP_RS05425 -0.8 -1.0 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01075 -0.8 -0.8 hypothetical protein compare
MMP_RS05850 -0.8 -1.6 Ldh family oxidoreductase compare
MMP_RS04440 -0.8 -2.9 nitrogenase iron protein compare
MMP_RS02975 -0.8 -1.8 DUF2124 domain-containing protein compare
MMP_RS04720 -0.8 -0.7 DedA family protein compare
MMP_RS04605 -0.7 -1.5 cobalt ECF transporter T component CbiQ compare
MMP_RS00310 -0.7 -3.2 CBS domain-containing protein compare
MMP_RS05640 -0.7 -1.8 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS03440 -0.7 -0.4 MoaD/ThiS family protein compare
MMP_RS03425 -0.7 -2.8 hypothetical protein compare
MMP_RS08830 -0.7 -2.7 GTP-binding protein compare
MMP_RS02195 -0.7 -0.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01440 -0.7 -1.7 NAAT family transporter compare
MMP_RS09045 -0.7 -3.9 class III signal peptide-containing protein compare
MMP_RS01890 -0.7 -0.9 nucleotide sugar dehydrogenase compare
MMP_RS00735 -0.7 -1.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS03420 -0.7 -1.0 acetolactate synthase small subunit compare
MMP_RS02955 -0.7 -1.0 DJ-1/PfpI family protein compare
MMP_RS00535 -0.7 -0.6 TIGR00375 family protein compare
MMP_RS04410 -0.7 -1.4 hypothetical protein compare
MMP_RS01240 -0.7 -0.6 7-cyano-7-deazaguanine synthase QueC compare
MMP_RS04195 -0.7 -1.0 flavodoxin compare
MMP_RS03555 -0.7 -2.0 transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress sodium bromide across organisms