Experiment set11S266 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete Novobiocin sodium salt 0.05 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS06400 -5.9 -2.8 4Fe-4S binding protein compare
MMP_RS01545 -5.9 -1.6 CBS domain-containing protein compare
MMP_RS05550 -5.2 -1.4 cation:proton antiporter compare
MMP_RS07860 -4.6 -1.3 hypothetical protein compare
MMP_RS06730 -4.6 -2.7 phosphopantothenate/pantothenate synthetase compare
MMP_RS03475 -4.3 -1.1 hypothetical protein compare
MMP_RS08435 -4.1 -2.6 Era-like GTP-binding protein compare
MMP_RS08790 -3.8 -2.5 translation initiation factor IF-2 subunit alpha compare
MMP_RS00750 -3.1 -2.1 fumarate hydratase compare
MMP_RS07635 -2.9 -5.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07545 -2.7 -1.4 HTH domain-containing protein compare
MMP_RS06315 -2.7 -1.3 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS05845 -2.7 -2.2 tRNA-intron lyase compare
MMP_RS07730 -2.6 -2.1 pyruvate synthase subunit beta compare
MMP_RS01755 -2.5 -1.6 DUF2097 domain-containing protein compare
MMP_RS03600 -2.5 -2.3 triose-phosphate isomerase compare
MMP_RS07355 -2.5 -1.2 transcription factor S compare
MMP_RS01195 -2.4 -1.6 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06600 -2.3 -1.2 class III signal peptide-containing protein compare
MMP_RS01960 -2.3 -1.1 hypothetical protein compare
MMP_RS01265 -2.2 -2.2 hypothetical protein compare
MMP_RS06630 -2.2 -1.1 UPF0058 family protein compare
MMP_RS01175 -2.2 -3.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02280 -2.1 -0.8 DUF211 domain-containing protein compare
MMP_RS06295 -2.1 -4.0 methanogenesis marker 14 protein compare
MMP_RS08650 -2.0 -3.6 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS05555 -2.0 -1.2 DUF4040 domain-containing protein compare
MMP_RS07005 -2.0 -0.8 4Fe-4S binding protein compare
MMP_RS06925 -2.0 -2.0 ribonuclease VapC4 compare
MMP_RS03700 -2.0 -4.8 sodium:proton antiporter compare
MMP_RS02145 -2.0 -5.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS03640 -1.9 -2.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS03445 -1.9 -1.0 methanogenesis marker 17 protein compare
MMP_RS06130 -1.9 -2.7 peptidylprolyl isomerase compare
MMP_RS08720 -1.9 -1.3 4Fe-4S binding protein compare
MMP_RS08715 -1.9 -1.4 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01365 -1.8 -1.8 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS05920 -1.8 -0.7 50S ribosomal protein L37e compare
MMP_RS00110 -1.8 -2.4 hypothetical protein compare
MMP_RS06120 -1.7 -1.5 UPF0147 family protein compare
MMP_RS09020 -1.7 -1.4 hypothetical protein compare
MMP_RS05515 -1.6 -3.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS08675 -1.6 -3.4 class III signal peptide-containing protein compare
MMP_RS06885 -1.6 -1.8 50S ribosome-binding GTPase compare
MMP_RS08860 -1.6 -4.1 MinD/ParA family protein compare
MMP_RS07390 -1.6 -1.7 cell division protein FtsZ compare
MMP_RS07735 -1.6 -0.8 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS06350 -1.6 -4.5 HesA/MoeB/ThiF family protein compare
MMP_RS00515 -1.6 -1.0 DUF655 domain-containing protein compare
MMP_RS05265 -1.6 -1.8 2-isopropylmalate synthase compare
MMP_RS07955 -1.6 -3.0 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS03035 -1.6 -2.3 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS03015 -1.6 -5.5 GTP 3' 8-cyclase MoaA compare
MMP_RS03440 -1.5 -1.1 MoaD/ThiS family protein compare
MMP_RS07755 -1.5 -1.2 DUF555 domain-containing protein compare
MMP_RS01270 -1.5 -9.8 prepilin peptidase compare
MMP_RS08745 -1.5 -3.3 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS04710 -1.5 -1.4 hypothetical protein compare
MMP_RS06725 -1.5 -5.2 hypothetical protein compare
MMP_RS00300 -1.5 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS03580 -1.4 -3.2 signal recognition particle-docking protein FtsY compare
MMP_RS03485 -1.4 -4.6 TIGR00267 family protein compare
MMP_RS02235 -1.4 -5.6 CBS domain-containing protein compare
MMP_RS07900 -1.4 -2.5 YeeE/YedE family protein compare
MMP_RS01180 -1.4 -1.0 XTP/dITP diphosphatase compare
MMP_RS01085 -1.4 -1.8 hypothetical protein compare
MMP_RS08330 -1.4 -3.0 NADH-quinone oxidoreductase subunit H compare
MMP_RS08210 -1.4 -1.1 phosphatidylglycerophosphatase A compare
MMP_RS01285 -1.3 -6.6 hypothetical protein compare
MMP_RS07200 -1.3 -3.0 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS03315 -1.3 -0.7 ferrous iron transport protein A compare
MMP_RS08195 -1.3 -5.2 hypothetical protein compare
MMP_RS01830 -1.3 -1.2 tRNA-Val compare
MMP_RS02290 -1.3 -3.4 MBL fold metallo-hydrolase compare
MMP_RS07600 -1.3 -1.4 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01225 -1.3 -2.5 DUF5379 domain-containing protein compare
MMP_RS03025 -1.2 -2.5 molybdenum cofactor guanylyltransferase compare
MMP_RS02010 -1.2 -4.7 PHP domain-containing protein compare
MMP_RS05425 -1.2 -2.1 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01795 -1.2 -0.8 methanogenesis marker 6 protein compare
MMP_RS01005 -1.2 -1.1 riboflavin synthase compare
MMP_RS06105 -1.2 -4.4 hydrogenase maturation peptidase HycI compare
MMP_RS00250 -1.2 -8.1 Flp pilus assembly complex ATPase component TadA compare
MMP_RS08645 -1.2 -4.1 UPF0179 family protein compare
MMP_RS01280 -1.2 -6.2 DUF515 domain-containing protein compare
MMP_RS03390 -1.1 -3.6 malate dehydrogenase compare
MMP_RS06900 -1.1 -1.2 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS04900 -1.1 -8.5 hypothetical protein compare
MMP_RS06535 -1.1 -2.9 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS03080 -1.1 -2.1 universal stress protein compare
MMP_RS01290 -1.1 -5.1 class III signal peptide-containing protein compare
MMP_RS01610 -1.1 -2.6 hypothetical protein compare
MMP_RS01315 -1.1 -9.4 DUF2341 domain-containing protein compare
MMP_RS08855 -1.1 -5.8 hypothetical protein compare
MMP_RS07075 -1.1 -1.5 phosphomannomutase/phosphoglucomutase compare
MMP_RS01305 -1.1 -8.3 hypothetical protein compare
MMP_RS01885 -1.1 -2.9 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06110 -1.1 -1.7 ATP-dependent protease LonB compare
MMP_RS00245 -1.1 -8.4 type II secretion system F family protein compare
MMP_RS05295 -1.1 -4.9 minichromosome maintenance protein MCM compare
MMP_RS06435 -1.1 -2.6 CBS domain-containing protein compare
MMP_RS04720 -1.1 -1.9 DedA family protein compare
MMP_RS03555 -1.1 -3.2 transcriptional regulator compare
MMP_RS00240 -1.1 -7.0 type II secretion system F family protein compare
MMP_RS02240 -1.0 -1.4 methanogenesis marker 7 protein compare
MMP_RS02800 -1.0 -4.4 nucleotidyltransferase domain-containing protein compare
MMP_RS01900 -1.0 -4.6 hypothetical protein compare
MMP_RS01310 -1.0 -6.8 hypothetical protein compare
MMP_RS04955 -1.0 -2.4 DNA topoisomerase I compare
MMP_RS01295 -1.0 -4.9 hypothetical protein compare
MMP_RS04485 -1.0 -5.3 putative beta-lysine N-acetyltransferase compare
MMP_RS08105 -1.0 -3.6 6-carboxyhexanoate--CoA ligase compare
MMP_RS05540 -1.0 -1.9 hypothetical protein compare
MMP_RS05850 -1.0 -2.4 Ldh family oxidoreductase compare
MMP_RS01650 -1.0 -0.6 sulfurtransferase TusA family protein compare
MMP_RS04695 -1.0 -3.0 selenide water dikinase SelD compare
MMP_RS02790 -1.0 -0.8 class III signal peptide-containing protein compare
MMP_RS01875 -1.0 -3.0 N-acetyltransferase compare
MMP_RS07750 -0.9 -1.4 DUF357 domain-containing protein compare
MMP_RS00985 -0.9 -2.3 CDC48 family AAA ATPase compare
MMP_RS01155 -0.9 -4.1 XRE family transcriptional regulator compare
MMP_RS02175 -0.9 -0.6 DUF1611 domain-containing protein compare
MMP_RS01700 -0.9 -0.6 dihydroxy-acid dehydratase compare
MMP_RS06625 -0.9 -0.8 DNA primase compare
MMP_RS07875 -0.9 -3.4 hypothetical protein compare
MMP_RS00060 -0.9 -1.2 3-dehydroquinate synthase II compare
MMP_RS00915 -0.9 -2.6 DUF116 domain-containing protein compare
MMP_RS07420 -0.9 -2.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS09055 -0.9 -0.8 CAP domain-containing protein compare
MMP_RS08455 -0.9 -2.7 multiprotein bridging factor aMBF1 compare
MMP_RS01020 -0.9 -0.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06670 -0.9 -1.8 glucose-6-phosphate isomerase compare
MMP_RS07380 -0.9 -1.2 transcription elongation factor Spt5 compare
MMP_RS08820 -0.9 -2.1 hypothetical protein compare
MMP_RS02340 -0.9 -0.9 DNA-directed RNA polymerase subunit E'' compare
MMP_RS06340 -0.9 -2.6 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03420 -0.8 -2.2 acetolactate synthase small subunit compare
MMP_RS01500 -0.8 -1.0 CBS domain-containing protein compare
MMP_RS02245 -0.8 -2.5 hypothetical protein compare
MMP_RS01275 -0.8 -3.5 class III signal peptide-containing protein compare
MMP_RS02355 -0.8 -1.9 30S ribosomal protein S27ae compare
MMP_RS00150 -0.8 -2.7 AAA family ATPase compare
MMP_RS04585 -0.8 -4.2 AIR synthase related protein compare
MMP_RS07445 -0.8 -2.7 helix-turn-helix domain-containing protein compare
MMP_RS00130 -0.8 -0.6 nickel-responsive transcriptional regulator NikR compare
MMP_RS00740 -0.8 -2.3 cyclase family protein compare
MMP_RS03125 -0.8 -2.9 cell division ATPase MinD compare
MMP_RS05580 -0.8 -5.1 glycosyltransferase compare
MMP_RS03095 -0.8 -2.4 diphthine synthase compare
MMP_RS06530 -0.8 -1.9 bifunctional hexulose-6-phosphate synthase/ribonuclease regulator compare
MMP_RS08830 -0.8 -2.3 GTP-binding protein compare
MMP_RS00730 -0.8 -2.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06270 -0.8 -1.7 TIGR00300 family protein compare
MMP_RS05535 -0.8 -1.9 hypothetical protein compare
MMP_RS09045 -0.7 -4.5 class III signal peptide-containing protein compare
MMP_RS03155 -0.7 -3.0 precorrin-6A reductase compare
MMP_RS00555 -0.7 -3.2 MFS transporter compare
MMP_RS08095 -0.7 -2.9 dethiobiotin synthase compare
MMP_RS08320 -0.7 -2.5 molybdopterin molybdotransferase MoeA compare
MMP_RS06355 -0.7 -1.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS02885 -0.7 -4.5 molybdopterin biosynthesis protein compare
MMP_RS01460 -0.7 -1.1 hypothetical protein compare
MMP_RS06035 -0.7 -4.0 glycosyltransferase family 2 protein compare
MMP_RS05440 -0.7 -2.3 winged helix-turn-helix transcriptional regulator compare
MMP_RS08155 -0.7 -2.8 hypothetical protein compare
MMP_RS00125 -0.7 -0.8 DUF2798 domain-containing protein compare
MMP_RS01045 -0.7 -3.0 diphthamide biosynthesis enzyme Dph2 compare
MMP_RS08835 -0.7 -3.6 H(2)-dependent methylenetetrahydromethanopterin dehydrogenase-related protein compare
MMP_RS05765 -0.7 -2.6 M42 family metallopeptidase compare
MMP_RS08940 -0.7 -0.8 MetS family NSS transporter small subunit compare
MMP_RS06980 -0.7 -2.1 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS00320 -0.7 -0.9 class I SAM-dependent methyltransferase compare
MMP_RS04615 -0.7 -1.3 PDGLE domain-containing protein compare
MMP_RS01075 -0.7 -0.9 hypothetical protein compare
MMP_RS01430 -0.7 -2.5 mechanosensitive ion channel family protein compare
MMP_RS02345 -0.7 -0.7 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS04850 -0.7 -4.2 UPF0254 family protein compare
MMP_RS07695 -0.7 -2.0 DUF3236 domain-containing protein compare
MMP_RS00305 -0.7 -0.6 phosphoribosyl-ATP diphosphatase compare
MMP_RS02765 -0.7 -1.9 ABC transporter ATP-binding protein compare
MMP_RS01220 -0.6 -2.3 hypothetical protein compare
MMP_RS08290 -0.6 -2.4 DNA-binding protein Alba compare
MMP_RS02610 -0.6 -1.7 DUF2162 domain-containing protein compare
MMP_RS04775 -0.6 -1.1 adenosylhomocysteinase compare
MMP_RS01325 -0.6 -0.7 dihydroneopterin aldolase family protein compare
MMP_RS07330 -0.6 -4.1 membrane protein compare
MMP_RS01745 -0.6 -2.3 AMP phosphorylase compare
MMP_RS00450 -0.6 -1.0 4Fe-4S binding protein compare
MMP_RS04780 -0.6 -0.8 ribonuclease P compare
MMP_RS04360 -0.6 -1.2 hypothetical protein compare
MMP_RS08930 -0.6 -0.6 hypothetical protein compare
MMP_RS05875 -0.6 -2.4 hydroxyethylthiazole kinase compare
MMP_RS01955 -0.6 -0.5 hypothetical protein compare
MMP_RS01985 -0.6 -1.8 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS06290 -0.6 -1.5 DNA repair and recombination protein RadA compare
MMP_RS07645 -0.6 -2.1 aldehyde dehydrogenase family protein compare
MMP_RS08240 -0.6 -1.3 methanogenesis marker 16 metalloprotein compare
MMP_RS00965 -0.6 -1.0 hypothetical protein compare
MMP_RS03590 -0.6 -1.9 METTL5 family protein compare
MMP_RS03205 -0.5 -0.5 peptidyl-tRNA hydrolase Pth2 compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Novobiocin sodium salt across organisms