Experiment set11S264 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS06730 -7.5 -1.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS01175 -6.6 -3.3 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08720 -6.2 -1.3 4Fe-4S binding protein compare
MMP_RS01755 -5.8 -0.8 DUF2097 domain-containing protein compare
MMP_RS09020 -5.6 -1.3 hypothetical protein compare
MMP_RS00300 -5.6 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04710 -5.2 -1.8 hypothetical protein compare
MMP_RS02900 -5.2 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS03475 -5.2 -0.5 hypothetical protein compare
MMP_RS05920 -5.0 -0.5 50S ribosomal protein L37e compare
MMP_RS05845 -4.7 -1.6 tRNA-intron lyase compare
MMP_RS01960 -4.6 -0.7 hypothetical protein compare
MMP_RS02240 -4.6 -2.5 methanogenesis marker 7 protein compare
MMP_RS05550 -4.6 -0.7 cation:proton antiporter compare
MMP_RS00110 -3.8 -2.7 hypothetical protein compare
MMP_RS06350 -3.7 -5.6 HesA/MoeB/ThiF family protein compare
MMP_RS08300 -3.7 -1.1 metal-sulfur cluster assembly factor compare
MMP_RS07555 -3.6 -0.6 monovalent cation/H+ antiporter subunit E compare
MMP_RS06295 -3.6 -5.3 methanogenesis marker 14 protein compare
MMP_RS06020 -3.4 -3.0 archaeoflavoprotein AfpA compare
MMP_RS04890 -3.4 -0.7 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS04685 -3.2 -2.1 DUF126 domain-containing protein compare
MMP_RS07635 -3.1 -6.8 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07750 -3.1 -4.6 DUF357 domain-containing protein compare
MMP_RS06315 -3.1 -0.9 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS08440 -3.1 -2.6 cell division protein SepF compare
MMP_RS08635 -3.0 -1.5 UbiA family prenyltransferase compare
MMP_RS01225 -2.9 -4.3 DUF5379 domain-containing protein compare
MMP_RS01265 -2.8 -3.0 hypothetical protein compare
MMP_RS06285 -2.8 -1.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06925 -2.8 -2.5 ribonuclease VapC4 compare
MMP_RS08675 -2.7 -3.0 class III signal peptide-containing protein compare
MMP_RS08460 -2.6 -1.9 proteasome-activating nucleotidase compare
MMP_RS01545 -2.6 -0.8 CBS domain-containing protein compare
MMP_RS00810 -2.6 -5.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03315 -2.6 -1.1 ferrous iron transport protein A compare
MMP_RS03580 -2.6 -3.2 signal recognition particle-docking protein FtsY compare
MMP_RS01610 -2.6 -2.2 hypothetical protein compare
MMP_RS05515 -2.5 -6.2 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS07005 -2.5 -0.5 4Fe-4S binding protein compare
MMP_RS08855 -2.5 -10.6 hypothetical protein compare
MMP_RS03015 -2.5 -7.0 GTP 3' 8-cyclase MoaA compare
MMP_RS06725 -2.5 -7.0 hypothetical protein compare
MMP_RS05815 -2.4 -1.5 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06600 -2.4 -1.0 class III signal peptide-containing protein compare
MMP_RS01270 -2.4 -12.6 prepilin peptidase compare
MMP_RS01005 -2.4 -1.0 riboflavin synthase compare
MMP_RS04900 -2.4 -14.9 hypothetical protein compare
MMP_RS02800 -2.4 -5.5 nucleotidyltransferase domain-containing protein compare
MMP_RS01285 -2.4 -10.3 hypothetical protein compare
MMP_RS06120 -2.4 -1.4 UPF0147 family protein compare
MMP_RS07605 -2.4 -3.1 diadenylate cyclase compare
MMP_RS00240 -2.4 -13.8 type II secretion system F family protein compare
MMP_RS08860 -2.4 -4.6 MinD/ParA family protein compare
MMP_RS01830 -2.4 -1.2 tRNA-Val compare
MMP_RS07730 -2.4 -1.5 pyruvate synthase subunit beta compare
MMP_RS00245 -2.4 -17.2 type II secretion system F family protein compare
MMP_RS07330 -2.4 -14.6 membrane protein compare
MMP_RS01305 -2.3 -17.0 hypothetical protein compare
MMP_RS00985 -2.3 -3.6 CDC48 family AAA ATPase compare
MMP_RS01365 -2.3 -2.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00250 -2.3 -14.2 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01295 -2.3 -10.7 hypothetical protein compare
MMP_RS06355 -2.3 -1.8 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS07845 -2.3 -2.3 LL-diaminopimelate aminotransferase compare
MMP_RS07545 -2.3 -0.9 HTH domain-containing protein compare
MMP_RS05635 -2.3 -7.8 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS01310 -2.3 -11.8 hypothetical protein compare
MMP_RS03640 -2.3 -2.8 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01195 -2.3 -1.1 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS01800 -2.3 -3.6 TIGR00303 family protein compare
MMP_RS04615 -2.2 -3.0 PDGLE domain-containing protein compare
MMP_RS01280 -2.2 -11.7 DUF515 domain-containing protein compare
MMP_RS00305 -2.2 -1.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS02145 -2.2 -4.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS01020 -2.2 -0.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00695 -2.2 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS06340 -2.2 -5.8 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03110 -2.2 -5.2 glycosyltransferase family 2 protein compare
MMP_RS08915 -2.2 -3.2 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS01275 -2.2 -5.8 class III signal peptide-containing protein compare
MMP_RS08745 -2.2 -4.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07390 -2.2 -2.0 cell division protein FtsZ compare
MMP_RS02345 -2.1 -2.4 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06035 -2.1 -6.6 glycosyltransferase family 2 protein compare
MMP_RS09055 -2.1 -0.9 CAP domain-containing protein compare
MMP_RS06900 -2.1 -2.0 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01290 -2.1 -10.6 class III signal peptide-containing protein compare
MMP_RS08820 -2.1 -4.1 hypothetical protein compare
MMP_RS08210 -2.1 -1.5 phosphatidylglycerophosphatase A compare
MMP_RS07695 -2.1 -5.2 DUF3236 domain-containing protein compare
MMP_RS05580 -2.1 -11.4 glycosyltransferase compare
MMP_RS03700 -2.1 -5.2 sodium:proton antiporter compare
MMP_RS07600 -2.1 -1.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01325 -2.1 -1.1 dihydroneopterin aldolase family protein compare
MMP_RS03600 -2.1 -1.7 triose-phosphate isomerase compare
MMP_RS01745 -2.0 -5.5 AMP phosphorylase compare
MMP_RS06230 -2.0 -1.9 helix-turn-helix domain-containing protein compare
MMP_RS02235 -2.0 -8.4 CBS domain-containing protein compare
MMP_RS04720 -2.0 -1.8 DedA family protein compare
MMP_RS01220 -2.0 -5.3 hypothetical protein compare
MMP_RS00895 -2.0 -2.6 hypothetical protein compare
MMP_RS03025 -1.9 -4.0 molybdenum cofactor guanylyltransferase compare
MMP_RS08715 -1.9 -1.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01315 -1.9 -14.1 DUF2341 domain-containing protein compare
MMP_RS01085 -1.9 -1.5 hypothetical protein compare
MMP_RS07820 -1.9 -3.1 UPF0104 family protein compare
MMP_RS05555 -1.9 -1.2 DUF4040 domain-containing protein compare
MMP_RS02195 -1.9 -3.0 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03435 -1.9 -1.0 ketol-acid reductoisomerase compare
MMP_RS08195 -1.9 -7.3 hypothetical protein compare
MMP_RS06980 -1.9 -4.8 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS08330 -1.9 -4.2 NADH-quinone oxidoreductase subunit H compare
MMP_RS00040 -1.8 -3.7 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS03095 -1.8 -4.4 diphthine synthase compare
MMP_RS03080 -1.8 -2.2 universal stress protein compare
MMP_RS00115 -1.8 -7.8 radical SAM protein compare
MMP_RS01900 -1.7 -8.3 hypothetical protein compare
MMP_RS07575 -1.7 -3.1 RNA ligase partner protein compare
MMP_RS05640 -1.7 -4.2 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS04955 -1.7 -4.1 DNA topoisomerase I compare
MMP_RS00315 -1.7 -3.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01885 -1.7 -4.8 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS06105 -1.7 -5.0 hydrogenase maturation peptidase HycI compare
MMP_RS07075 -1.6 -2.5 phosphomannomutase/phosphoglucomutase compare
MMP_RS07525 -1.6 -4.1 4Fe-4S binding protein compare
MMP_RS01385 -1.6 -0.4 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS05345 -1.6 -3.8 hypothetical protein compare
MMP_RS03390 -1.6 -5.0 malate dehydrogenase compare
MMP_RS06130 -1.6 -2.3 peptidylprolyl isomerase compare
MMP_RS03020 -1.6 -3.7 peptidylprolyl isomerase compare
MMP_RS09045 -1.6 -8.7 class III signal peptide-containing protein compare
MMP_RS01335 -1.6 -1.2 prefoldin subunit beta compare
MMP_RS01795 -1.5 -0.8 methanogenesis marker 6 protein compare
MMP_RS01500 -1.5 -1.0 CBS domain-containing protein compare
MMP_RS06895 -1.5 -0.9 selenocysteine-specific translation elongation factor compare
MMP_RS00750 -1.5 -1.2 fumarate hydratase compare
MMP_RS06110 -1.5 -2.3 ATP-dependent protease LonB compare
MMP_RS05425 -1.5 -2.5 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01665 -1.5 -2.5 DUF2111 domain-containing protein compare
MMP_RS06475 -1.5 -3.0 FAD-dependent oxidoreductase compare
MMP_RS08435 -1.5 -1.4 Era-like GTP-binding protein compare
MMP_RS04585 -1.5 -6.3 AIR synthase related protein compare
MMP_RS04780 -1.5 -1.7 ribonuclease P compare
MMP_RS04090 -1.5 -2.1 hypothetical protein compare
MMP_RS04775 -1.5 -2.4 adenosylhomocysteinase compare
MMP_RS01575 -1.5 -3.6 aldolase compare
MMP_RS00515 -1.5 -0.5 DUF655 domain-containing protein compare
MMP_RS00725 -1.4 -2.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08650 -1.4 -1.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01700 -1.4 -0.6 dihydroxy-acid dehydratase compare
MMP_RS01140 -1.4 -1.9 molybdate ABC transporter permease subunit compare
MMP_RS03140 -1.4 -5.7 hypothetical protein compare
MMP_RS03125 -1.4 -4.1 cell division ATPase MinD compare
MMP_RS07710 -1.4 -3.7 cell division protein FtsZ compare
MMP_RS05445 -1.4 -3.3 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS04850 -1.4 -7.9 UPF0254 family protein compare
MMP_RS05540 -1.4 -1.7 hypothetical protein compare
MMP_RS06495 -1.4 -2.0 YkgJ family cysteine cluster protein compare
MMP_RS01905 -1.4 -6.5 glycosyltransferase compare
MMP_RS06975 -1.4 -1.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS02340 -1.4 -1.4 DNA-directed RNA polymerase subunit E'' compare
MMP_RS01895 -1.4 -6.3 flippase compare
MMP_RS07620 -1.4 -2.6 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS06940 -1.4 -1.6 polyprenyl diphosphate synthase compare
MMP_RS08645 -1.3 -3.1 UPF0179 family protein compare
MMP_RS05280 -1.3 -5.2 COG1361 S-layer family protein compare
MMP_RS05430 -1.3 -4.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS07355 -1.3 -0.6 transcription factor S compare
MMP_RS03400 -1.3 -1.5 archease compare
MMP_RS06625 -1.3 -0.8 DNA primase compare
MMP_RS03445 -1.3 -0.6 methanogenesis marker 17 protein compare
MMP_RS03035 -1.3 -1.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS02010 -1.3 -2.5 PHP domain-containing protein compare
MMP_RS01925 -1.3 -3.6 DUF1616 domain-containing protein compare
MMP_RS01650 -1.3 -0.5 sulfurtransferase TusA family protein compare
MMP_RS05460 -1.2 -4.2 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS02355 -1.2 -1.8 30S ribosomal protein S27ae compare
MMP_RS04605 -1.2 -2.2 cobalt ECF transporter T component CbiQ compare
MMP_RS07420 -1.2 -2.8 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS04695 -1.2 -3.2 selenide water dikinase SelD compare
MMP_RS03155 -1.2 -3.9 precorrin-6A reductase compare
MMP_RS05245 -1.2 -3.9 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS06215 -1.2 -1.5 30S ribosomal protein S6e compare
MMP_RS06400 -1.2 -0.8 4Fe-4S binding protein compare
MMP_RS07735 -1.2 -0.4 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS07955 -1.2 -2.9 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07445 -1.2 -3.7 helix-turn-helix domain-containing protein compare
MMP_RS08840 -1.2 -3.8 class I SAM-dependent methyltransferase compare
MMP_RS00520 -1.2 -0.8 RNA polymerase Rpb4 family protein compare
MMP_RS07700 -1.2 -5.1 DUF1188 domain-containing protein compare
MMP_RS03485 -1.2 -2.0 TIGR00267 family protein compare
MMP_RS08155 -1.2 -3.4 hypothetical protein compare
MMP_RS06395 -1.2 -1.4 ThiF family adenylyltransferase compare
MMP_RS07900 -1.1 -1.2 YeeE/YedE family protein compare
MMP_RS02245 -1.1 -1.9 hypothetical protein compare
MMP_RS07630 -1.1 -0.7 ATP-binding cassette domain-containing protein compare
MMP_RS08830 -1.1 -2.8 GTP-binding protein compare
MMP_RS07875 -1.1 -3.0 hypothetical protein compare
MMP_RS06860 -1.1 -0.9 4Fe-4S binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments