Experiment set11S198 for Methanococcus maripaludis S2

Compare to:

McCas_H2_complete Lithium chloride hydrate 250 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS01755 -5.5 -0.9 DUF2097 domain-containing protein compare
MMP_RS05920 -4.8 -0.6 50S ribosomal protein L37e compare
MMP_RS01265 -4.3 -2.7 hypothetical protein compare
MMP_RS06730 -4.1 -1.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS08650 -4.0 -3.2 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06120 -3.9 -1.7 UPF0147 family protein compare
MMP_RS03960 -3.7 -0.9 hypothetical protein compare
MMP_RS09020 -3.6 -1.5 hypothetical protein compare
MMP_RS07735 -3.5 -0.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS08300 -3.5 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS01005 -3.5 -1.2 riboflavin synthase compare
MMP_RS07845 -3.4 -2.2 LL-diaminopimelate aminotransferase compare
MMP_RS08790 -3.1 -1.7 translation initiation factor IF-2 subunit alpha compare
MMP_RS03025 -3.0 -5.1 molybdenum cofactor guanylyltransferase compare
MMP_RS04890 -3.0 -0.7 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01545 -3.0 -0.9 CBS domain-containing protein compare
MMP_RS06625 -2.8 -1.5 DNA primase compare
MMP_RS08370 -2.8 -0.6 cation:proton antiporter subunit C compare
MMP_RS03315 -2.8 -1.1 ferrous iron transport protein A compare
MMP_RS02145 -2.7 -6.2 winged helix-turn-helix transcriptional regulator compare
MMP_RS02010 -2.6 -7.1 PHP domain-containing protein compare
MMP_RS07420 -2.6 -3.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07730 -2.6 -1.4 pyruvate synthase subunit beta compare
MMP_RS07600 -2.6 -1.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06925 -2.6 -2.3 ribonuclease VapC4 compare
MMP_RS06630 -2.6 -0.7 UPF0058 family protein compare
MMP_RS08675 -2.5 -2.9 class III signal peptide-containing protein compare
MMP_RS06350 -2.5 -6.5 HesA/MoeB/ThiF family protein compare
MMP_RS00750 -2.5 -2.1 fumarate hydratase compare
MMP_RS09055 -2.4 -0.9 CAP domain-containing protein compare
MMP_RS00300 -2.4 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08820 -2.4 -5.2 hypothetical protein compare
MMP_RS06355 -2.4 -2.1 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS01325 -2.3 -1.1 dihydroneopterin aldolase family protein compare
MMP_RS02355 -2.3 -2.4 30S ribosomal protein S27ae compare
MMP_RS07755 -2.3 -1.0 DUF555 domain-containing protein compare
MMP_RS01385 -2.3 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS00305 -2.3 -1.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS07635 -2.3 -5.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01925 -2.3 -7.4 DUF1616 domain-containing protein compare
MMP_RS05555 -2.3 -1.3 DUF4040 domain-containing protein compare
MMP_RS04710 -2.2 -1.6 hypothetical protein compare
MMP_RS01270 -2.2 -12.0 prepilin peptidase compare
MMP_RS02240 -2.2 -2.7 methanogenesis marker 7 protein compare
MMP_RS08210 -2.1 -1.8 phosphatidylglycerophosphatase A compare
MMP_RS01865 -2.1 -1.1 GPR1/FUN34/YaaH family transporter compare
MMP_RS08715 -2.0 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS01890 -2.0 -3.0 nucleotide sugar dehydrogenase compare
MMP_RS07750 -2.0 -4.2 DUF357 domain-containing protein compare
MMP_RS08940 -2.0 -1.2 MetS family NSS transporter small subunit compare
MMP_RS05250 -2.0 -3.1 NFYB/HAP3 family transcription factor subunit compare
MMP_RS03475 -2.0 -0.5 hypothetical protein compare
MMP_RS04585 -2.0 -7.6 AIR synthase related protein compare
MMP_RS08635 -1.9 -1.3 UbiA family prenyltransferase compare
MMP_RS06670 -1.9 -4.1 glucose-6-phosphate isomerase compare
MMP_RS06940 -1.9 -2.7 polyprenyl diphosphate synthase compare
MMP_RS04900 -1.9 -14.1 hypothetical protein compare
MMP_RS02340 -1.9 -1.6 DNA-directed RNA polymerase subunit E'' compare
MMP_RS03700 -1.9 -6.4 sodium:proton antiporter compare
MMP_RS07075 -1.9 -2.7 phosphomannomutase/phosphoglucomutase compare
MMP_RS04780 -1.9 -2.2 ribonuclease P compare
MMP_RS00250 -1.9 -11.3 Flp pilus assembly complex ATPase component TadA compare
MMP_RS00240 -1.8 -10.1 type II secretion system F family protein compare
MMP_RS01305 -1.8 -10.6 hypothetical protein compare
MMP_RS01725 -1.8 -2.8 class I SAM-dependent methyltransferase family protein compare
MMP_RS06340 -1.8 -4.4 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06285 -1.8 -1.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS07955 -1.8 -3.4 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS07820 -1.8 -3.4 UPF0104 family protein compare
MMP_RS06035 -1.8 -7.4 glycosyltransferase family 2 protein compare
MMP_RS05635 -1.8 -5.8 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS06900 -1.8 -1.5 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS01310 -1.8 -8.9 hypothetical protein compare
MMP_RS01280 -1.7 -8.5 DUF515 domain-containing protein compare
MMP_RS01175 -1.7 -2.4 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08720 -1.7 -0.9 4Fe-4S binding protein compare
MMP_RS00245 -1.7 -12.2 type II secretion system F family protein compare
MMP_RS08860 -1.7 -5.0 MinD/ParA family protein compare
MMP_RS08745 -1.7 -4.2 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS08855 -1.7 -6.1 hypothetical protein compare
MMP_RS03400 -1.6 -2.0 archease compare
MMP_RS08195 -1.6 -6.8 hypothetical protein compare
MMP_RS05515 -1.6 -4.9 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS07545 -1.6 -0.7 HTH domain-containing protein compare
MMP_RS08155 -1.6 -6.3 hypothetical protein compare
MMP_RS01195 -1.6 -1.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07380 -1.6 -1.3 transcription elongation factor Spt5 compare
MMP_RS03125 -1.6 -3.9 cell division ATPase MinD compare
MMP_RS01875 -1.6 -5.2 N-acetyltransferase compare
MMP_RS03110 -1.6 -3.9 glycosyltransferase family 2 protein compare
MMP_RS01290 -1.6 -7.9 class III signal peptide-containing protein compare
MMP_RS06315 -1.6 -0.8 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS05835 -1.6 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS03580 -1.6 -2.4 signal recognition particle-docking protein FtsY compare
MMP_RS07355 -1.6 -0.7 transcription factor S compare
MMP_RS01295 -1.6 -6.5 hypothetical protein compare
MMP_RS06295 -1.6 -4.5 methanogenesis marker 14 protein compare
MMP_RS01380 -1.5 -2.5 PHP domain-containing protein compare
MMP_RS01315 -1.5 -11.5 DUF2341 domain-containing protein compare
MMP_RS04720 -1.5 -1.8 DedA family protein compare
MMP_RS03020 -1.5 -3.6 peptidylprolyl isomerase compare
MMP_RS00915 -1.5 -4.9 DUF116 domain-containing protein compare
MMP_RS01880 -1.5 -3.3 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS03390 -1.5 -5.3 malate dehydrogenase compare
MMP_RS01905 -1.5 -7.2 glycosyltransferase compare
MMP_RS05425 -1.5 -2.5 monovalent cation/H+ antiporter complex subunit F compare
MMP_RS01285 -1.5 -7.3 hypothetical protein compare
MMP_RS04485 -1.5 -7.7 putative beta-lysine N-acetyltransferase compare
MMP_RS06725 -1.5 -6.4 hypothetical protein compare
MMP_RS01225 -1.5 -2.5 DUF5379 domain-containing protein compare
MMP_RS07575 -1.5 -2.6 RNA ligase partner protein compare
MMP_RS04955 -1.5 -3.9 DNA topoisomerase I compare
MMP_RS06270 -1.5 -2.9 TIGR00300 family protein compare
MMP_RS06895 -1.4 -0.9 selenocysteine-specific translation elongation factor compare
MMP_RS01540 -1.4 -1.8 DUF504 domain-containing protein compare
MMP_RS06885 -1.4 -1.6 50S ribosome-binding GTPase compare
MMP_RS03145 -1.4 -3.5 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS00985 -1.4 -3.5 CDC48 family AAA ATPase compare
MMP_RS08435 -1.4 -1.4 Era-like GTP-binding protein compare
MMP_RS01885 -1.4 -3.7 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS07005 -1.4 -0.4 4Fe-4S binding protein compare
MMP_RS01900 -1.4 -5.1 hypothetical protein compare
MMP_RS08440 -1.4 -1.4 cell division protein SepF compare
MMP_RS00730 -1.4 -3.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07860 -1.4 -0.4 hypothetical protein compare
MMP_RS04685 -1.4 -1.6 DUF126 domain-containing protein compare
MMP_RS07875 -1.3 -2.8 hypothetical protein compare
MMP_RS07330 -1.3 -9.5 membrane protein compare
MMP_RS00725 -1.3 -3.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS09045 -1.3 -6.8 class III signal peptide-containing protein compare
MMP_RS02195 -1.3 -2.4 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03015 -1.3 -4.8 GTP 3' 8-cyclase MoaA compare
MMP_RS06310 -1.3 -2.6 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS00735 -1.3 -2.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS03600 -1.3 -1.3 triose-phosphate isomerase compare
MMP_RS07200 -1.3 -3.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00115 -1.3 -6.2 radical SAM protein compare
MMP_RS00130 -1.3 -0.6 nickel-responsive transcriptional regulator NikR compare
MMP_RS05345 -1.3 -3.4 hypothetical protein compare
MMP_RS01020 -1.3 -0.6 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS01075 -1.3 -1.3 hypothetical protein compare
MMP_RS05245 -1.3 -5.1 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS08330 -1.3 -2.6 NADH-quinone oxidoreductase subunit H compare
MMP_RS05580 -1.3 -7.5 glycosyltransferase compare
MMP_RS03140 -1.2 -5.5 hypothetical protein compare
MMP_RS01915 -1.2 -6.5 DUF354 domain-containing protein compare
MMP_RS07710 -1.2 -4.2 cell division protein FtsZ compare
MMP_RS01910 -1.2 -4.4 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS06980 -1.2 -3.0 tRNA 2-thiocytidine biosynthesis TtcA family protein compare
MMP_RS07695 -1.2 -2.5 DUF3236 domain-containing protein compare
MMP_RS03080 -1.2 -1.9 universal stress protein compare
MMP_RS05430 -1.2 -2.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS00685 -1.2 -1.6 2-phospho-L-lactate guanylyltransferase compare
MMP_RS05910 -1.2 -2.1 cell division ATPase MinD compare
MMP_RS08995 -1.2 -0.8 hypothetical protein compare
MMP_RS05695 -1.2 -3.4 phospholipase D-like domain-containing protein compare
MMP_RS06400 -1.2 -0.8 4Fe-4S binding protein compare
MMP_RS00810 -1.2 -2.3 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04850 -1.2 -7.0 UPF0254 family protein compare
MMP_RS01085 -1.2 -1.2 hypothetical protein compare
MMP_RS04715 -1.2 -4.1 CBS domain-containing protein compare
MMP_RS01275 -1.2 -3.6 class III signal peptide-containing protein compare
MMP_RS05845 -1.1 -0.9 tRNA-intron lyase compare
MMP_RS07685 -1.1 -3.8 TIGR01212 family radical SAM protein compare
MMP_RS02800 -1.1 -2.3 nucleotidyltransferase domain-containing protein compare
MMP_RS00945 -1.1 -0.6 PadR family transcriptional regulator compare
MMP_RS07700 -1.1 -4.8 DUF1188 domain-containing protein compare
MMP_RS07390 -1.1 -1.1 cell division protein FtsZ compare
MMP_RS01895 -1.1 -6.4 flippase compare
MMP_RS01955 -1.1 -1.2 hypothetical protein compare
MMP_RS05850 -1.1 -2.2 Ldh family oxidoreductase compare
MMP_RS06865 -1.1 -0.7 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS06130 -1.1 -1.1 peptidylprolyl isomerase compare
MMP_RS03320 -1.1 -2.1 metal-dependent transcriptional regulator compare
MMP_RS01470 -1.0 -1.8 ATP-binding cassette domain-containing protein compare
MMP_RS05285 -1.0 -3.0 MMPL family transporter compare
MMP_RS04615 -1.0 -2.0 PDGLE domain-containing protein compare
MMP_RS00895 -1.0 -1.5 hypothetical protein compare
MMP_RS04480 -1.0 -7.1 lysine 2 3-aminomutase compare
MMP_RS02495 -1.0 -1.3 hypothetical protein compare
MMP_RS03640 -1.0 -2.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS00040 -1.0 -2.7 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS02190 -1.0 -1.1 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS02245 -1.0 -2.0 hypothetical protein compare
MMP_RS03035 -1.0 -1.8 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01500 -1.0 -0.7 CBS domain-containing protein compare
MMP_RS07605 -1.0 -1.7 diadenylate cyclase compare
MMP_RS03385 -1.0 -0.6 cation diffusion facilitator family transporter compare
MMP_RS03250 -1.0 -1.8 MJ1244 family protein compare
MMP_RS01665 -1.0 -1.8 DUF2111 domain-containing protein compare
MMP_RS08645 -1.0 -2.8 UPF0179 family protein compare
MMP_RS01220 -1.0 -3.5 hypothetical protein compare
MMP_RS02700 -0.9 -3.2 formylmethanofuran dehydrogenase subunit C compare
MMP_RS01575 -0.9 -2.8 aldolase compare
MMP_RS01600 -0.9 -1.5 50S ribosomal protein L15e compare
MMP_RS01985 -0.9 -2.4 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS06365 -0.9 -0.9 hypothetical protein compare
MMP_RS04630 -0.9 -2.4 3'-5' exonuclease compare
MMP_RS02875 -0.9 -3.2 chorismate pyruvate-lyase family protein compare
MMP_RS05875 -0.9 -1.6 hydroxyethylthiazole kinase compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress Lithium chloride hydrate across organisms